Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30657
         (724 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB065869-1|BAC06087.1|  309|Homo sapiens seven transmembrane hel...    30   9.6  

>AB065869-1|BAC06087.1|  309|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 309

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
 Frame = -3

Query: 326 LGLTYNPK-ELLLATLNFVH*MNKISGTLFFFTLK---PNQQSPKYLVFKKKKYLSIIEN 159
           LGLT  P+ ++++    F+  M  I G L   TL    P+ Q+P Y   +   +L I   
Sbjct: 13  LGLTNQPELQVMIFIFLFLTYMLSILGNLTIITLTLLDPHLQTPMYFFLRNFSFLEISFT 72

Query: 158 SIF 150
           SIF
Sbjct: 73  SIF 75


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,835,271
Number of Sequences: 237096
Number of extensions: 1982329
Number of successful extensions: 2880
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2846
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2880
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8511181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)