Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30653
         (713 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    24   1.4  
AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan oxyge...    23   2.5  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    23   2.5  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    23   2.5  
EF532798-1|ABQ08060.1|   50|Tribolium castaneum acetylcholineste...    22   4.3  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.7  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   7.5  

>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = +1

Query: 88  QIKTPKMKAKGQSREYEVIGRKLPSENEPKPPLYKMR 198
           Q  TP  +  G   E +      P+EN P  P YK++
Sbjct: 416 QRSTPSPRVYGNVNENQDCST--PTENSPTKPYYKLK 450


>AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 135

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/24 (37%), Positives = 17/24 (70%)
 Frame = -2

Query: 331 LILMGLFSGISLIETISPVVFLNF 260
           LIL  L   + ++ET++P+ F++F
Sbjct: 40  LILKVLVDQVMILETMTPLDFMDF 63


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/24 (37%), Positives = 17/24 (70%)
 Frame = -2

Query: 331 LILMGLFSGISLIETISPVVFLNF 260
           LIL  L   + ++ET++P+ F++F
Sbjct: 100 LILKVLVDQVMILETMTPLDFMDF 123


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/24 (37%), Positives = 17/24 (70%)
 Frame = -2

Query: 331 LILMGLFSGISLIETISPVVFLNF 260
           LIL  L   + ++ET++P+ F++F
Sbjct: 100 LILKVLVDQVMILETMTPLDFMDF 123


>EF532798-1|ABQ08060.1|   50|Tribolium castaneum
           acetylcholinesterase protein.
          Length = 50

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 34  N*WIPRAAGIRHEADQVFQIKTPKM 108
           N W+P+   IRH  D+  Q + PK+
Sbjct: 17  NIWVPQRLRIRHHGDKPPQ-ERPKV 40


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -3

Query: 99   SFYLKDLVSLVPNSCSPG 46
            SFY+     LVP +C+PG
Sbjct: 1220 SFYVCVNGHLVPQNCAPG 1237


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -2

Query: 619 GLLYAKVLSLL*WCTRLGNGN 557
           G ++AK+LS+L     LGN N
Sbjct: 501 GTIFAKLLSVLTELRTLGNQN 521


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,967
Number of Sequences: 336
Number of extensions: 3421
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)