Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30653
(713 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L05093-1|AAC18781.1| 176|Homo sapiens ribosomal protein L18a pr... 143 5e-34
BC071920-1|AAH71920.1| 176|Homo sapiens ribosomal protein L18a ... 143 5e-34
BC066319-1|AAH66319.1| 176|Homo sapiens ribosomal protein L18a ... 143 5e-34
BC007512-1|AAH07512.1| 176|Homo sapiens ribosomal protein L18a ... 143 5e-34
AK222647-1|BAD96367.1| 176|Homo sapiens ribosomal protein L18a ... 143 5e-34
AC005796-1|AAC62828.1| 176|Homo sapiens ribosomal protein L18a ... 143 5e-34
X80822-1|CAA56788.1| 140|Homo sapiens protein ( H.sapiens mRNA ... 124 2e-28
AY779046-1|AAX47571.1| 136|Homo sapiens ribosomal protein L18a-... 120 4e-27
AB007175-1|BAA28596.1| 66|Homo sapiens ribosomal protein L18a ... 61 3e-09
BC112202-1|AAI12203.1| 511|Homo sapiens FBXO41 protein protein. 33 1.0
AB075820-1|BAB85526.1| 821|Homo sapiens KIAA1940 protein protein. 33 1.0
BC131535-1|AAI31536.1| 1426|Homo sapiens ATPase, Class V, type 1... 31 5.4
BC057839-1|AAH57839.1| 535|Homo sapiens ATP10D protein protein. 31 5.4
AJ441078-1|CAD29577.1| 1426|Homo sapiens putative type IV aminop... 31 5.4
>L05093-1|AAC18781.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 143 bits (347), Expect = 5e-34
Identities = 72/131 (54%), Positives = 83/131 (63%)
Frame = +3
Query: 234 FLVFPETLKKFKKTTGEIVXXXXXXXXXXXXXXNFGIWLRYESRSGVHNMYREYRDLSLG 413
F F LKK KK++GEIV NFGIWLRY+SRSG HNMYREYRDL+
Sbjct: 44 FWYFVSQLKKMKKSSGEIVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTA 103
Query: 414 GAVTQCYRDMGARHRARAHSIQIIKVEVIKAARVAVHRSNSSTTAPFRFPLPKRVHHYKR 593
GAVTQCYRDMGARHRARAHSIQI+KVE I A++ + +FPLP RV +
Sbjct: 104 GAVTQCYRDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQH 163
Query: 594 LNTFAYKRPST 626
F KRP+T
Sbjct: 164 KPRFTTKRPNT 174
Score = 76.2 bits (179), Expect = 1e-13
Identities = 34/76 (44%), Positives = 51/76 (67%)
Frame = +1
Query: 106 MKAKGQSREYEVIGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRHLRSSRRPLVK 285
MKA G REY+V+GR LP+ PPLY+MRIF+P+ +VAKSRFWYF+ L+ ++ +
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGE 60
Query: 286 LSLLRKFQRKAPSRLR 333
+ + K+P R++
Sbjct: 61 IVYCGQVFEKSPLRVK 76
>BC071920-1|AAH71920.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 143 bits (347), Expect = 5e-34
Identities = 72/131 (54%), Positives = 83/131 (63%)
Frame = +3
Query: 234 FLVFPETLKKFKKTTGEIVXXXXXXXXXXXXXXNFGIWLRYESRSGVHNMYREYRDLSLG 413
F F LKK KK++GEIV NFGIWLRY+SRSG HNMYREYRDL+
Sbjct: 44 FWYFVSQLKKMKKSSGEIVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTA 103
Query: 414 GAVTQCYRDMGARHRARAHSIQIIKVEVIKAARVAVHRSNSSTTAPFRFPLPKRVHHYKR 593
GAVTQCYRDMGARHRARAHSIQI+KVE I A++ + +FPLP RV +
Sbjct: 104 GAVTQCYRDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQH 163
Query: 594 LNTFAYKRPST 626
F KRP+T
Sbjct: 164 KPRFTTKRPNT 174
Score = 76.2 bits (179), Expect = 1e-13
Identities = 34/76 (44%), Positives = 51/76 (67%)
Frame = +1
Query: 106 MKAKGQSREYEVIGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRHLRSSRRPLVK 285
MKA G REY+V+GR LP+ PPLY+MRIF+P+ +VAKSRFWYF+ L+ ++ +
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGE 60
Query: 286 LSLLRKFQRKAPSRLR 333
+ + K+P R++
Sbjct: 61 IVYCGQVFEKSPLRVK 76
>BC066319-1|AAH66319.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 143 bits (347), Expect = 5e-34
Identities = 72/131 (54%), Positives = 83/131 (63%)
Frame = +3
Query: 234 FLVFPETLKKFKKTTGEIVXXXXXXXXXXXXXXNFGIWLRYESRSGVHNMYREYRDLSLG 413
F F LKK KK++GEIV NFGIWLRY+SRSG HNMYREYRDL+
Sbjct: 44 FWYFVSQLKKMKKSSGEIVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTA 103
Query: 414 GAVTQCYRDMGARHRARAHSIQIIKVEVIKAARVAVHRSNSSTTAPFRFPLPKRVHHYKR 593
GAVTQCYRDMGARHRARAHSIQI+KVE I A++ + +FPLP RV +
Sbjct: 104 GAVTQCYRDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQH 163
Query: 594 LNTFAYKRPST 626
F KRP+T
Sbjct: 164 KPRFTTKRPNT 174
Score = 76.2 bits (179), Expect = 1e-13
Identities = 34/76 (44%), Positives = 51/76 (67%)
Frame = +1
Query: 106 MKAKGQSREYEVIGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRHLRSSRRPLVK 285
MKA G REY+V+GR LP+ PPLY+MRIF+P+ +VAKSRFWYF+ L+ ++ +
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGE 60
Query: 286 LSLLRKFQRKAPSRLR 333
+ + K+P R++
Sbjct: 61 IVYCGQVFEKSPLRVK 76
>BC007512-1|AAH07512.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 143 bits (347), Expect = 5e-34
Identities = 72/131 (54%), Positives = 83/131 (63%)
Frame = +3
Query: 234 FLVFPETLKKFKKTTGEIVXXXXXXXXXXXXXXNFGIWLRYESRSGVHNMYREYRDLSLG 413
F F LKK KK++GEIV NFGIWLRY+SRSG HNMYREYRDL+
Sbjct: 44 FWYFVSQLKKMKKSSGEIVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTA 103
Query: 414 GAVTQCYRDMGARHRARAHSIQIIKVEVIKAARVAVHRSNSSTTAPFRFPLPKRVHHYKR 593
GAVTQCYRDMGARHRARAHSIQI+KVE I A++ + +FPLP RV +
Sbjct: 104 GAVTQCYRDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQH 163
Query: 594 LNTFAYKRPST 626
F KRP+T
Sbjct: 164 KPRFTTKRPNT 174
Score = 76.2 bits (179), Expect = 1e-13
Identities = 34/76 (44%), Positives = 51/76 (67%)
Frame = +1
Query: 106 MKAKGQSREYEVIGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRHLRSSRRPLVK 285
MKA G REY+V+GR LP+ PPLY+MRIF+P+ +VAKSRFWYF+ L+ ++ +
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGE 60
Query: 286 LSLLRKFQRKAPSRLR 333
+ + K+P R++
Sbjct: 61 IVYCGQVFEKSPLRVK 76
>AK222647-1|BAD96367.1| 176|Homo sapiens ribosomal protein L18a
variant protein.
Length = 176
Score = 143 bits (347), Expect = 5e-34
Identities = 72/131 (54%), Positives = 83/131 (63%)
Frame = +3
Query: 234 FLVFPETLKKFKKTTGEIVXXXXXXXXXXXXXXNFGIWLRYESRSGVHNMYREYRDLSLG 413
F F LKK KK++GEIV NFGIWLRY+SRSG HNMYREYRDL+
Sbjct: 44 FWYFVSQLKKMKKSSGEIVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTAA 103
Query: 414 GAVTQCYRDMGARHRARAHSIQIIKVEVIKAARVAVHRSNSSTTAPFRFPLPKRVHHYKR 593
GAVTQCYRDMGARHRARAHSIQI+KVE I A++ + +FPLP RV +
Sbjct: 104 GAVTQCYRDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQH 163
Query: 594 LNTFAYKRPST 626
F KRP+T
Sbjct: 164 KPRFTTKRPNT 174
Score = 76.2 bits (179), Expect = 1e-13
Identities = 34/76 (44%), Positives = 51/76 (67%)
Frame = +1
Query: 106 MKAKGQSREYEVIGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRHLRSSRRPLVK 285
MKA G REY+V+GR LP+ PPLY+MRIF+P+ +VAKSRFWYF+ L+ ++ +
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGE 60
Query: 286 LSLLRKFQRKAPSRLR 333
+ + K+P R++
Sbjct: 61 IVYCGQVFEKSPLRVK 76
>AC005796-1|AAC62828.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 143 bits (347), Expect = 5e-34
Identities = 72/131 (54%), Positives = 83/131 (63%)
Frame = +3
Query: 234 FLVFPETLKKFKKTTGEIVXXXXXXXXXXXXXXNFGIWLRYESRSGVHNMYREYRDLSLG 413
F F LKK KK++GEIV NFGIWLRY+SRSG HNMYREYRDL+
Sbjct: 44 FWYFVSQLKKMKKSSGEIVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTA 103
Query: 414 GAVTQCYRDMGARHRARAHSIQIIKVEVIKAARVAVHRSNSSTTAPFRFPLPKRVHHYKR 593
GAVTQCYRDMGARHRARAHSIQI+KVE I A++ + +FPLP RV +
Sbjct: 104 GAVTQCYRDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQH 163
Query: 594 LNTFAYKRPST 626
F KRP+T
Sbjct: 164 KPRFTTKRPNT 174
Score = 76.2 bits (179), Expect = 1e-13
Identities = 34/76 (44%), Positives = 51/76 (67%)
Frame = +1
Query: 106 MKAKGQSREYEVIGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRHLRSSRRPLVK 285
MKA G REY+V+GR LP+ PPLY+MRIF+P+ +VAKSRFWYF+ L+ ++ +
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGE 60
Query: 286 LSLLRKFQRKAPSRLR 333
+ + K+P R++
Sbjct: 61 IVYCGQVFEKSPLRVK 76
>X80822-1|CAA56788.1| 140|Homo sapiens protein ( H.sapiens mRNA for
ORF. ).
Length = 140
Score = 124 bits (300), Expect = 2e-28
Identities = 59/98 (60%), Positives = 68/98 (69%)
Frame = +3
Query: 333 NFGIWLRYESRSGVHNMYREYRDLSLGGAVTQCYRDMGARHRARAHSIQIIKVEVIKAAR 512
NFGIWL Y+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRARAHSIQI+KVE I ++
Sbjct: 41 NFGIWLSYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMKVEEIAVSK 100
Query: 513 VAVHRSNSSTTAPFRFPLPKRVHHYKRLNTFAYKRPST 626
+ +FPLP RV + F KRP+T
Sbjct: 101 CRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNT 138
>AY779046-1|AAX47571.1| 136|Homo sapiens ribosomal protein
L18a-like protein protein.
Length = 136
Score = 120 bits (290), Expect = 4e-27
Identities = 58/93 (62%), Positives = 65/93 (69%)
Frame = +3
Query: 234 FLVFPETLKKFKKTTGEIVXXXXXXXXXXXXXXNFGIWLRYESRSGVHNMYREYRDLSLG 413
F F LKK KK++GE V NFGIWLR +SRSG HNMYREYRDL+
Sbjct: 44 FWYFVSQLKKMKKSSGETVYCGQVFEKSPLRVKNFGIWLRCDSRSGTHNMYREYRDLTTA 103
Query: 414 GAVTQCYRDMGARHRARAHSIQIIKVEVIKAAR 512
GAVTQCYRDMGARHRARAHSIQI+ VE I A++
Sbjct: 104 GAVTQCYRDMGARHRARAHSIQIMMVEEIAASK 136
Score = 77.0 bits (181), Expect = 6e-14
Identities = 34/76 (44%), Positives = 51/76 (67%)
Frame = +1
Query: 106 MKAKGQSREYEVIGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRHLRSSRRPLVK 285
MKA G REY+V+GR+LP+ PPLY+MRIF+P+ +VAKSRFWYF+ L+ ++ +
Sbjct: 1 MKASGTLREYKVVGRRLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGE 60
Query: 286 LSLLRKFQRKAPSRLR 333
+ K+P R++
Sbjct: 61 TVYCGQVFEKSPLRVK 76
>AB007175-1|BAA28596.1| 66|Homo sapiens ribosomal protein L18a
protein.
Length = 66
Score = 61.3 bits (142), Expect = 3e-09
Identities = 32/64 (50%), Positives = 39/64 (60%)
Frame = +3
Query: 435 RDMGARHRARAHSIQIIKVEVIKAARVAVHRSNSSTTAPFRFPLPKRVHHYKRLNTFAYK 614
RDMGARHRARAHSIQI+KVE I A++ + +FPLP RV + F K
Sbjct: 1 RDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTK 60
Query: 615 RPST 626
RP+T
Sbjct: 61 RPNT 64
>BC112202-1|AAI12203.1| 511|Homo sapiens FBXO41 protein protein.
Length = 511
Score = 33.1 bits (72), Expect = 1.0
Identities = 28/100 (28%), Positives = 49/100 (49%)
Frame = +1
Query: 46 PRAAGIRHEADQVFQIKTPKMKAKGQSREYEVIGRKLPSENEPKPPLYKMRIFSPDPIVA 225
PR++G+R +A Q +Q + + +G+ + +G + +E+E + PL R P P +A
Sbjct: 93 PRSSGLRRQAIQNWQRRPRRHSTEGEEGDVSDVGSR-TTESEAEGPLDAPR---PGPAMA 148
Query: 226 KSRFWYFLRHLRSSRRPLVKLSLLRKFQRKAPSRLRTLVS 345
L R S RP R+ +R +PSR ++S
Sbjct: 149 GP-----LSSCRLSARPEGGSGRGRRAERVSPSRSNEVIS 183
>AB075820-1|BAB85526.1| 821|Homo sapiens KIAA1940 protein protein.
Length = 821
Score = 33.1 bits (72), Expect = 1.0
Identities = 28/100 (28%), Positives = 49/100 (49%)
Frame = +1
Query: 46 PRAAGIRHEADQVFQIKTPKMKAKGQSREYEVIGRKLPSENEPKPPLYKMRIFSPDPIVA 225
PR++G+R +A Q +Q + + +G+ + +G + +E+E + PL R P P +A
Sbjct: 403 PRSSGLRRQAIQNWQRRPRRHSTEGEEGDVSDVGSR-TTESEAEGPLDAPR---PGPAMA 458
Query: 226 KSRFWYFLRHLRSSRRPLVKLSLLRKFQRKAPSRLRTLVS 345
L R S RP R+ +R +PSR ++S
Sbjct: 459 GP-----LSSCRLSARPEGGSGRGRRAERVSPSRSNEVIS 493
>BC131535-1|AAI31536.1| 1426|Homo sapiens ATPase, Class V, type 10D
protein.
Length = 1426
Score = 30.7 bits (66), Expect = 5.4
Identities = 20/76 (26%), Positives = 33/76 (43%)
Frame = +1
Query: 70 EADQVFQIKTPKMKAKGQSREYEVIGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFL 249
+ D + I+T + + ++ +V+ ++E P + RI P SRF FL
Sbjct: 200 DPDGICHIETSGLDGESNLKQRQVVRGYAEQDSEVDPEKFSSRIECESPNNDLSRFRGFL 259
Query: 250 RHLRSSRRPLVKLSLL 297
H R L K +LL
Sbjct: 260 EHSNKERVGLSKENLL 275
>BC057839-1|AAH57839.1| 535|Homo sapiens ATP10D protein protein.
Length = 535
Score = 30.7 bits (66), Expect = 5.4
Identities = 20/76 (26%), Positives = 33/76 (43%)
Frame = +1
Query: 70 EADQVFQIKTPKMKAKGQSREYEVIGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFL 249
+ D + I+T + + ++ +V+ ++E P + RI P SRF FL
Sbjct: 200 DPDGICHIETSGLDGESNLKQRQVVRGYAEQDSEVDPEKFSSRIECESPNNDLSRFRGFL 259
Query: 250 RHLRSSRRPLVKLSLL 297
H R L K +LL
Sbjct: 260 EHSNKERVGLSKENLL 275
>AJ441078-1|CAD29577.1| 1426|Homo sapiens putative type IV
aminophospholipid transporting ATPase protein.
Length = 1426
Score = 30.7 bits (66), Expect = 5.4
Identities = 20/76 (26%), Positives = 33/76 (43%)
Frame = +1
Query: 70 EADQVFQIKTPKMKAKGQSREYEVIGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFL 249
+ D + I+T + + ++ +V+ ++E P + RI P SRF FL
Sbjct: 200 DPDGICHIETSGLDGESNLKQRQVVRGYAEQDSEVDPEKFSSRIECESPNNDLSRFRGFL 259
Query: 250 RHLRSSRRPLVKLSLL 297
H R L K +LL
Sbjct: 260 EHSNKERVGLSKENLL 275
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,059,865
Number of Sequences: 237096
Number of extensions: 2179301
Number of successful extensions: 9655
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 9355
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9647
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8343197486
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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