Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30653
         (713 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X75339-1|CAA53089.1|  177|Drosophila melanogaster ribosomal prot...   157   1e-38
AY071222-1|AAL48844.1|  177|Drosophila melanogaster RE26382p pro...   157   1e-38
AE013599-2503|AAF57838.1|  177|Drosophila melanogaster CG6510-PA...   157   1e-38
X85998-1|CAA59990.1|  110|Drosophila melanogaster elastin like p...    48   1e-05
BT023059-1|AAY55475.1|  328|Drosophila melanogaster IP10969p pro...    33   0.51 

>X75339-1|CAA53089.1|  177|Drosophila melanogaster ribosomal protein
           L18a protein.
          Length = 177

 Score =  157 bits (381), Expect = 1e-38
 Identities = 76/131 (58%), Positives = 88/131 (67%)
 Frame = +3

Query: 234 FLVFPETLKKFKKTTGEIVXXXXXXXXXXXXXXNFGIWLRYESRSGVHNMYREYRDLSLG 413
           F  F   LKKFKKTTGEIV              NFGIWLRY+SRSG HNMYREYRDL++G
Sbjct: 44  FWYFLRQLKKFKKTTGEIVSIKQVYETSPVKIKNFGIWLRYDSRSGTHNMYREYRDLTVG 103

Query: 414 GAVTQCYRDMGARHRARAHSIQIIKVEVIKAARVAVHRSNSSTTAPFRFPLPKRVHHYKR 593
           GAVTQCYRDMGARHRARAHSIQIIKV+ I AA+           +  +FPL +RVHH   
Sbjct: 104 GAVTQCYRDMGARHRARAHSIQIIKVDSIPAAKTRRVHVKQFHDSKIKFPLVQRVHHKGN 163

Query: 594 LNTFAYKRPST 626
              F++++P T
Sbjct: 164 RKLFSFRKPRT 174



 Score = 95.9 bits (228), Expect = 5e-20
 Identities = 41/76 (53%), Positives = 58/76 (76%)
 Frame = +1

Query: 106 MKAKGQSREYEVIGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRHLRSSRRPLVK 285
           M+AKG  +EYEV+GRKLPSE EP+ PLYKMRIF+PD IVAKSRFWYFLR L+  ++   +
Sbjct: 1   MRAKGLLKEYEVVGRKLPSEKEPQTPLYKMRIFAPDNIVAKSRFWYFLRQLKKFKKTTGE 60

Query: 286 LSLLRKFQRKAPSRLR 333
           +  +++    +P +++
Sbjct: 61  IVSIKQVYETSPVKIK 76


>AY071222-1|AAL48844.1|  177|Drosophila melanogaster RE26382p
           protein.
          Length = 177

 Score =  157 bits (381), Expect = 1e-38
 Identities = 76/131 (58%), Positives = 88/131 (67%)
 Frame = +3

Query: 234 FLVFPETLKKFKKTTGEIVXXXXXXXXXXXXXXNFGIWLRYESRSGVHNMYREYRDLSLG 413
           F  F   LKKFKKTTGEIV              NFGIWLRY+SRSG HNMYREYRDL++G
Sbjct: 44  FWYFLRQLKKFKKTTGEIVSIKQVYETSPVKIKNFGIWLRYDSRSGTHNMYREYRDLTVG 103

Query: 414 GAVTQCYRDMGARHRARAHSIQIIKVEVIKAARVAVHRSNSSTTAPFRFPLPKRVHHYKR 593
           GAVTQCYRDMGARHRARAHSIQIIKV+ I AA+           +  +FPL +RVHH   
Sbjct: 104 GAVTQCYRDMGARHRARAHSIQIIKVDSIPAAKTRRVHVKQFHDSKIKFPLVQRVHHKGN 163

Query: 594 LNTFAYKRPST 626
              F++++P T
Sbjct: 164 RKLFSFRKPRT 174



 Score = 95.9 bits (228), Expect = 5e-20
 Identities = 41/76 (53%), Positives = 58/76 (76%)
 Frame = +1

Query: 106 MKAKGQSREYEVIGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRHLRSSRRPLVK 285
           M+AKG  +EYEV+GRKLPSE EP+ PLYKMRIF+PD IVAKSRFWYFLR L+  ++   +
Sbjct: 1   MRAKGLLKEYEVVGRKLPSEKEPQTPLYKMRIFAPDNIVAKSRFWYFLRQLKKFKKTTGE 60

Query: 286 LSLLRKFQRKAPSRLR 333
           +  +++    +P +++
Sbjct: 61  IVSIKQVYETSPVKIK 76


>AE013599-2503|AAF57838.1|  177|Drosophila melanogaster CG6510-PA
           protein.
          Length = 177

 Score =  157 bits (381), Expect = 1e-38
 Identities = 76/131 (58%), Positives = 88/131 (67%)
 Frame = +3

Query: 234 FLVFPETLKKFKKTTGEIVXXXXXXXXXXXXXXNFGIWLRYESRSGVHNMYREYRDLSLG 413
           F  F   LKKFKKTTGEIV              NFGIWLRY+SRSG HNMYREYRDL++G
Sbjct: 44  FWYFLRQLKKFKKTTGEIVSIKQVYETSPVKIKNFGIWLRYDSRSGTHNMYREYRDLTVG 103

Query: 414 GAVTQCYRDMGARHRARAHSIQIIKVEVIKAARVAVHRSNSSTTAPFRFPLPKRVHHYKR 593
           GAVTQCYRDMGARHRARAHSIQIIKV+ I AA+           +  +FPL +RVHH   
Sbjct: 104 GAVTQCYRDMGARHRARAHSIQIIKVDSIPAAKTRRVHVKQFHDSKIKFPLVQRVHHKGN 163

Query: 594 LNTFAYKRPST 626
              F++++P T
Sbjct: 164 RKLFSFRKPRT 174



 Score = 95.9 bits (228), Expect = 5e-20
 Identities = 41/76 (53%), Positives = 58/76 (76%)
 Frame = +1

Query: 106 MKAKGQSREYEVIGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRHLRSSRRPLVK 285
           M+AKG  +EYEV+GRKLPSE EP+ PLYKMRIF+PD IVAKSRFWYFLR L+  ++   +
Sbjct: 1   MRAKGLLKEYEVVGRKLPSEKEPQTPLYKMRIFAPDNIVAKSRFWYFLRQLKKFKKTTGE 60

Query: 286 LSLLRKFQRKAPSRLR 333
           +  +++    +P +++
Sbjct: 61  IVSIKQVYETSPVKIK 76


>X85998-1|CAA59990.1|  110|Drosophila melanogaster elastin like
          protein protein.
          Length = 110

 Score = 48.0 bits (109), Expect = 1e-05
 Identities = 22/22 (100%), Positives = 22/22 (100%)
 Frame = +3

Query: 6  SSTAVAAALELVDPPGCRNSAR 71
          SSTAVAAALELVDPPGCRNSAR
Sbjct: 2  SSTAVAAALELVDPPGCRNSAR 23


>BT023059-1|AAY55475.1|  328|Drosophila melanogaster IP10969p
           protein.
          Length = 328

 Score = 32.7 bits (71), Expect = 0.51
 Identities = 13/18 (72%), Positives = 16/18 (88%)
 Frame = +1

Query: 106 MKAKGQSREYEVIGRKLP 159
           M+AKG  +EYEV+GRKLP
Sbjct: 1   MRAKGLLKEYEVVGRKLP 18


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,312,530
Number of Sequences: 53049
Number of extensions: 665786
Number of successful extensions: 2250
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2247
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3170136354
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)