Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30652
         (753 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q82DZ0 Cluster: Putative sugar hydrolase; n=2; Streptom...    35   2.5  
UniRef50_A7E4V7 Cluster: Predicted protein; n=1; Sclerotinia scl...    33   7.6  
UniRef50_A2QUR4 Cluster: Contig An09c0220, complete genome; n=2;...    33   7.6  

>UniRef50_Q82DZ0 Cluster: Putative sugar hydrolase; n=2;
           Streptomyces|Rep: Putative sugar hydrolase -
           Streptomyces avermitilis
          Length = 349

 Score = 34.7 bits (76), Expect = 2.5
 Identities = 16/43 (37%), Positives = 23/43 (53%)
 Frame = -3

Query: 199 TSSLSYCMYTKHTTLNVIDNSGSPHQAPVSVKISESQIANPKW 71
           TSS +Y  Y   TT + +D +GSP    ++  IS+     PKW
Sbjct: 57  TSSTAYAPYVSATTASDMDPAGSPSTYNLAFVISDGSDCTPKW 99


>UniRef50_A7E4V7 Cluster: Predicted protein; n=1; Sclerotinia
           sclerotiorum 1980|Rep: Predicted protein - Sclerotinia
           sclerotiorum 1980
          Length = 326

 Score = 33.1 bits (72), Expect = 7.6
 Identities = 18/48 (37%), Positives = 22/48 (45%)
 Frame = -1

Query: 168 NIQHLMSLTTQAPHTKRLSV*KSLNPKLPTQSGRYQPILKCDL*NYQT 25
           N  HL ++ T+  H  R +     NPK PT   R  PI   DL  Y T
Sbjct: 276 NPHHLPTIATKPAHPPRETSPNKRNPKPPTTKKRILPIALSDLSKYDT 323


>UniRef50_A2QUR4 Cluster: Contig An09c0220, complete genome; n=2;
           Pezizomycotina|Rep: Contig An09c0220, complete genome -
           Aspergillus niger
          Length = 315

 Score = 33.1 bits (72), Expect = 7.6
 Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
 Frame = -1

Query: 237 ILINYSRISTTAGPLVLVI-ACIQNIQHLMSLTTQAPHTKRLSV*KSLNPKLPTQSGRY 64
           IL+NY R ST    L+  + ACI N+ +++S+   +P  +R    +  + +L +  GRY
Sbjct: 216 ILLNYRRKSTDGVSLLFFLFACIGNLTYVLSILAYSPVCERSHHGRCRSDELASLYGRY 274


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 692,802,834
Number of Sequences: 1657284
Number of extensions: 12505118
Number of successful extensions: 27859
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 27061
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27858
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62146450145
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)