Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30652
         (753 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY122134-1|AAM52646.1|  966|Drosophila melanogaster GH27779p pro...    31   1.3  
AE014134-308|AAF51329.2|  966|Drosophila melanogaster CG31663-PA...    31   1.3  
X15586-1|CAA33611.1| 1443|Drosophila melanogaster protein ( D.me...    30   3.9  

>AY122134-1|AAM52646.1|  966|Drosophila melanogaster GH27779p
           protein.
          Length = 966

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
 Frame = -1

Query: 294 GEICDYRSIKYNHIVYKLTILINYSRISTTAGPLVLVIACI-QNIQHLMSLTTQAPHTKR 118
           GE C  R I  N I+ K+T+ + Y   S+    L + +  I   ++ +  +    P T  
Sbjct: 25  GEFCQRRGINPNLIMLKITLFVMYGATSSLLPYLTIHMQSIGLTVEEIAIIYLALPFTTF 84

Query: 117 LSV*KSLNPKLPTQSGRYQPILKCDL 40
           LS    +   L  + G+Y+P++   L
Sbjct: 85  LS--PPITGFLVDKFGKYKPVVVMSL 108


>AE014134-308|AAF51329.2|  966|Drosophila melanogaster CG31663-PA
           protein.
          Length = 966

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
 Frame = -1

Query: 294 GEICDYRSIKYNHIVYKLTILINYSRISTTAGPLVLVIACI-QNIQHLMSLTTQAPHTKR 118
           GE C  R I  N I+ K+T+ + Y   S+    L + +  I   ++ +  +    P T  
Sbjct: 25  GEFCQRRGINPNLIMLKITLFVMYGATSSLLPYLTIHMQSIGLTVEEIAIIYLALPFTTF 84

Query: 117 LSV*KSLNPKLPTQSGRYQPILKCDL 40
           LS    +   L  + G+Y+P++   L
Sbjct: 85  LS--PPITGFLVDKFGKYKPVVVMSL 108


>X15586-1|CAA33611.1| 1443|Drosophila melanogaster protein (
            D.melanogaster 75B mRNAencoding hypothetical 75B protein.
            ).
          Length = 1443

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 17/57 (29%), Positives = 26/57 (45%)
 Frame = -3

Query: 205  CGTSSLSYCMYTKHTTLNVIDNSGSPHQAPVSVKISESQIANPKWTLSAYTKVRFIK 35
            C +SS S C Y +      I  +G P  APV  + +     N +WTL      +F++
Sbjct: 1276 CSSSSASSCQYFQSPHSTSI-GTGEPDGAPVRDRTAPRPCWNCRWTLLTRRTSQFVQ 1331


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,937,999
Number of Sequences: 53049
Number of extensions: 576080
Number of successful extensions: 1273
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1241
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1273
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3437745267
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)