Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30651
(718 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 22 5.0
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 22 5.0
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 22 5.0
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 22 5.0
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 22 5.0
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 22 5.0
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 22 5.0
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 22 6.7
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 22 6.7
AF134820-1|AAD40235.1| 166|Apis mellifera putative Ets-family p... 22 6.7
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 21 8.8
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 21 8.8
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 21 8.8
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 21 8.8
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 21 8.8
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 21 8.8
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 21 8.8
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 22.2 bits (45), Expect = 5.0
Identities = 9/32 (28%), Positives = 20/32 (62%)
Frame = -2
Query: 603 KSRDLRQRDQAMHCRTLRSSAANSLFALVNSY 508
+SRD R+R+++ + + S + N ++ N+Y
Sbjct: 66 RSRDRRERERSKEPKIISSLSNNYNYSNYNNY 97
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 5.0
Identities = 9/32 (28%), Positives = 20/32 (62%)
Frame = -2
Query: 603 KSRDLRQRDQAMHCRTLRSSAANSLFALVNSY 508
+SRD R+R+++ + + S + N ++ N+Y
Sbjct: 66 RSRDRRERERSKEPKIISSLSNNYNYSNYNNY 97
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 5.0
Identities = 9/32 (28%), Positives = 20/32 (62%)
Frame = -2
Query: 603 KSRDLRQRDQAMHCRTLRSSAANSLFALVNSY 508
+SRD R+R+++ + + S + N ++ N+Y
Sbjct: 66 RSRDRRERERSKEPKIISSLSNNYNYSNYNNY 97
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 5.0
Identities = 9/32 (28%), Positives = 20/32 (62%)
Frame = -2
Query: 603 KSRDLRQRDQAMHCRTLRSSAANSLFALVNSY 508
+SRD R+R+++ + + S + N ++ N+Y
Sbjct: 66 RSRDRRERERSKEPKIISSLSNNYNYSNYNNY 97
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 5.0
Identities = 9/32 (28%), Positives = 20/32 (62%)
Frame = -2
Query: 603 KSRDLRQRDQAMHCRTLRSSAANSLFALVNSY 508
+SRD R+R+++ + + S + N ++ N+Y
Sbjct: 66 RSRDRRERERSKEPKIISSLSNNYNYSNYNNY 97
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 5.0
Identities = 9/32 (28%), Positives = 20/32 (62%)
Frame = -2
Query: 603 KSRDLRQRDQAMHCRTLRSSAANSLFALVNSY 508
+SRD R+R+++ + + S + N ++ N+Y
Sbjct: 66 RSRDRRERERSKEPKIISSLSNNYNYSNYNNY 97
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 5.0
Identities = 9/32 (28%), Positives = 20/32 (62%)
Frame = -2
Query: 603 KSRDLRQRDQAMHCRTLRSSAANSLFALVNSY 508
+SRD R+R+++ + + S + N ++ N+Y
Sbjct: 66 RSRDRRERERSKEPKIISSLSNNYNYSNYNNY 97
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 21.8 bits (44), Expect = 6.7
Identities = 7/26 (26%), Positives = 13/26 (50%)
Frame = +3
Query: 30 NTIFYNLPSARRFYLILNQFTRKENN 107
+ ++YN PS+ Y + + K N
Sbjct: 262 HNLYYNSPSSENLYYVNTESLMKSEN 287
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 6.7
Identities = 9/32 (28%), Positives = 20/32 (62%)
Frame = -2
Query: 603 KSRDLRQRDQAMHCRTLRSSAANSLFALVNSY 508
+SRD R+R+++ + + S + N ++ N+Y
Sbjct: 66 RSRDRRERERSKEPKIVSSLSNNYNYSNYNNY 97
>AF134820-1|AAD40235.1| 166|Apis mellifera putative Ets-family
protein protein.
Length = 166
Score = 21.8 bits (44), Expect = 6.7
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +3
Query: 402 ALRKSLEIEDGLDKINLMTAYKVDKRARG 488
A +++ D +DK NL + KRA G
Sbjct: 111 ATKQACGFIDNIDKRNLSVTSMIQKRALG 139
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 8.8
Identities = 8/32 (25%), Positives = 20/32 (62%)
Frame = -2
Query: 603 KSRDLRQRDQAMHCRTLRSSAANSLFALVNSY 508
+SRD ++R+++ + + S + N ++ N+Y
Sbjct: 66 RSRDRKERERSKEPKIISSLSNNYKYSNYNNY 97
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 8.8
Identities = 8/32 (25%), Positives = 20/32 (62%)
Frame = -2
Query: 603 KSRDLRQRDQAMHCRTLRSSAANSLFALVNSY 508
+SRD ++R+++ + + S + N ++ N+Y
Sbjct: 66 RSRDRKERERSKEPKIISSLSNNYKYSNYNNY 97
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 8.8
Identities = 8/32 (25%), Positives = 20/32 (62%)
Frame = -2
Query: 603 KSRDLRQRDQAMHCRTLRSSAANSLFALVNSY 508
+SRD ++R+++ + + S + N ++ N+Y
Sbjct: 66 RSRDRKERERSKEPKIISSLSNNYKYSNYNNY 97
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 8.8
Identities = 8/32 (25%), Positives = 20/32 (62%)
Frame = -2
Query: 603 KSRDLRQRDQAMHCRTLRSSAANSLFALVNSY 508
+SRD ++R+++ + + S + N ++ N+Y
Sbjct: 66 RSRDRKERERSKEPKIISSLSNNYKYSNYNNY 97
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 21.4 bits (43), Expect = 8.8
Identities = 8/32 (25%), Positives = 20/32 (62%)
Frame = -2
Query: 603 KSRDLRQRDQAMHCRTLRSSAANSLFALVNSY 508
+SRD ++R+++ + + S + N ++ N+Y
Sbjct: 66 RSRDRKERERSKEPKIISSLSNNYKYSNYNNY 97
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 21.4 bits (43), Expect = 8.8
Identities = 11/38 (28%), Positives = 20/38 (52%), Gaps = 6/38 (15%)
Frame = +3
Query: 483 RGINNNSDSMSLRARTNCSQLM------ILMCDNAWLD 578
R + NNSD ++++ SQL+ +M N W++
Sbjct: 37 RPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVWVE 74
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 21.4 bits (43), Expect = 8.8
Identities = 8/32 (25%), Positives = 20/32 (62%)
Frame = -2
Query: 603 KSRDLRQRDQAMHCRTLRSSAANSLFALVNSY 508
+SRD ++R+++ + + S + N ++ N+Y
Sbjct: 299 RSRDRKERERSKEPKIISSLSNNYKYSNYNNY 330
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,480
Number of Sequences: 438
Number of extensions: 4724
Number of successful extensions: 20
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22170330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -