Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30651
(718 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g36370.1 68415.m04463 F-box family protein (FBL11) contains s... 31 1.0
At3g51400.1 68416.m05630 expressed protein contains Pfam profile... 29 2.3
At1g62170.1 68414.m07013 serpin family protein / serine protease... 29 2.3
At2g19880.1 68415.m02324 ceramide glucosyltransferase, putative ... 29 3.1
At1g23480.1 68414.m02945 glycosyl transferase family 2 protein s... 29 3.1
At1g13230.1 68414.m01535 leucine-rich repeat family protein cont... 29 3.1
At3g21210.1 68416.m02680 universal stress protein (USP) family p... 29 4.1
At1g19490.1 68414.m02428 bZIP transcription factor family protei... 29 4.1
At5g26570.1 68418.m03152 glycoside hydrolase starch-binding doma... 28 7.1
At5g20885.1 68418.m02480 zinc finger (C3HC4-type RING finger) fa... 28 7.1
At5g12240.1 68418.m01437 expressed protein 28 7.1
At2g15350.1 68415.m01756 xyloglucan fucosyltransferase, putative... 28 7.1
At1g36180.1 68414.m04497 acetyl-CoA carboxylase 2 (ACC2) nearly ... 28 7.1
At1g21610.2 68414.m02703 wound-responsive family protein similar... 28 7.1
At1g21610.1 68414.m02702 wound-responsive family protein similar... 28 7.1
At3g63130.1 68416.m07090 RAN GTPase activating protein 1 (RanGAP... 27 9.4
At3g43430.1 68416.m04597 zinc finger (C3HC4-type RING finger) fa... 27 9.4
At2g15370.1 68415.m01758 xyloglucan fucosyltransferase, putative... 27 9.4
At1g77740.1 68414.m09051 1-phosphatidylinositol-4-phosphate 5-ki... 27 9.4
At1g21980.1 68414.m02750 1-phosphatidylinositol-4-phosphate 5-ki... 27 9.4
>At2g36370.1 68415.m04463 F-box family protein (FBL11) contains
similarity to leucine-rich repeats containing F-box
protein FBL3 GI:5919219 from [Homo sapiens]
Length = 785
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +1
Query: 166 VVLFVVSTVTSQCFYKDDSSKKLNPEARTACITASWD 276
+V FV+ V + C+ +DD+S + + +A ASWD
Sbjct: 6 LVEFVILVVKNPCYQQDDASSSIQEISISASEIASWD 42
>At3g51400.1 68416.m05630 expressed protein contains Pfam profile
PF03087: Arabidopsis protein of unknown function
Length = 277
Score = 29.5 bits (63), Expect = 2.3
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = -1
Query: 589 SAKRSSHALSHIKIISCEQFVRA-RKLILSLLLFIPRARLSTLYAVIKFILSNPSSIS 419
S+ SSH L + C Q + R ++LSL +P+ R S V K ++ N +S S
Sbjct: 145 SSSESSHPLITLLQQVCSQTCQTFRTVLLSLSTAVPKPRPSKWALVTKLVIKNVTSTS 202
>At1g62170.1 68414.m07013 serpin family protein / serine protease
inhibitor family protein similar to phloem serpin-1
GI:9937311 from [Cucurbita maxima]; contains Pfam
profile PF00079: Serpin (serine protease inhibitor)
Length = 433
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 300 INDAVPDDNIFFSPFSVYHSLLLAYLSSGGQTEEALR 410
I+ + N FSP S+ +L + SSGG+ E LR
Sbjct: 83 ISSVAKNSNFVFSPASINAALTMVAASSGGEQGEELR 119
>At2g19880.1 68415.m02324 ceramide glucosyltransferase, putative
similar to ceramide glucosyltransferase (GI:14718995)
[Gossypium arboreum]; weak similarity to Ceramide
glucosyltransferase (Glucosylceramide synthase) (GCS)
(UDP-glucose:N-acylsphingosine D-glucosyltransferase)
(GLCT-1) (Swiss-Prot:Q16739) [Homo sapiens]
Length = 519
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +1
Query: 232 LNPEA-RTACITASWDSR*IFLIQSTTLYPMTTYSSHLSQ 348
L+PEA R + T +W + ++ LYP++ + SH SQ
Sbjct: 412 LSPEAPRLSLATYNWGLVFVAMLVDNFLYPISAFRSHFSQ 451
>At1g23480.1 68414.m02945 glycosyl transferase family 2 protein
similar to cellulose synthase from Agrobacterium
tumeficiens [gi:710492] and Agrobacterium radiobacter
[gi:710493]; contains Pfam glycosyl transferase, group 2
family protein domain PF00535 isoform contains GG
acceptor splice site at intron 1
Length = 556
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -1
Query: 514 LILSLLLFIPRARLSTLYAVIKFILSNPSSISK 416
L++SLLLFI R +S + +K + P + K
Sbjct: 71 LVMSLLLFIERVYMSIVVVFVKLLRRTPEKVHK 103
>At1g13230.1 68414.m01535 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to gb|U42445
Cf-2.2 from Lycopersicon pimpinellifolium
Length = 424
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +3
Query: 546 MILMCDNAWLDLFAEDLETLNFRENPG 626
M++ + W + FA +LE+L FR NPG
Sbjct: 129 MVIAKEELWTN-FASNLESLEFRSNPG 154
>At3g21210.1 68416.m02680 universal stress protein (USP) family
protein / DC1 domain-containing protein contains Pfam
profiles PF03107: DC1 domain, PF00582: universal stress
protein family
Length = 686
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/53 (24%), Positives = 24/53 (45%)
Frame = +3
Query: 465 KVDKRARGINNNSDSMSLRARTNCSQLMILMCDNAWLDLFAEDLETLNFRENP 623
++DK + + ++A + S+ +L C A+ ED + FRE P
Sbjct: 174 EIDKAKTALTASVHHQHIKAMDSVSKQPLLFCPRAYFTNNEEDFRAMQFREPP 226
>At1g19490.1 68414.m02428 bZIP transcription factor family protein
contains Pfam profile: PF00170 bZIP transcription factor
Length = 471
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/67 (23%), Positives = 32/67 (47%)
Frame = +2
Query: 443 NKFNDCV*SRQTSSRYKQQQR*YEFTSANKLFAADDLNVRQCMA*SLCRRSRDFEFPGKS 622
++ N C SRQ S ++++R AN+ A + RQ M L +++ D + ++
Sbjct: 140 SRSNGCGRSRQNLSEAEREERRIRRILANRESARQTIRRRQAMCEELSKKAADLTYENEN 199
Query: 623 WALPRDY 643
+D+
Sbjct: 200 LRREKDW 206
>At5g26570.1 68418.m03152 glycoside hydrolase starch-binding
domain-containing protein similar to SEX1 (starch
excess) [Arabidopsis thaliana] GI:12044358; contains
Pfam profile PF00686: Starch binding domain
Length = 1191
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +3
Query: 330 FFSPFSVYHSLLLAYLSSGGQTEEALRKSLEIED-GLDKINLMTAYKVDKRARGINNN 500
F F ++H+ L + ++G TE+ + ++D GL +NL K G ++N
Sbjct: 421 FVEQFKIFHNELKDFFNAGSLTEQLDSMKISMDDRGLSALNLFFECKKRLDTSGESSN 478
>At5g20885.1 68418.m02480 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 176
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/62 (25%), Positives = 27/62 (43%)
Frame = +3
Query: 393 TEEALRKSLEIEDGLDKINLMTAYKVDKRARGINNNSDSMSLRARTNCSQLMILMCDNAW 572
+ +A+++SL + D A D A + + D +R NCS + C + W
Sbjct: 54 SSQAIKESLSVTTFRDAAERSPAMINDTCAVCLGDLEDGDEVRELRNCSHMFHRECIDRW 113
Query: 573 LD 578
LD
Sbjct: 114 LD 115
>At5g12240.1 68418.m01437 expressed protein
Length = 225
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = -2
Query: 591 LRQRDQAMHCRTLRSSAANSLFALVNSYYRCCCLYRELVC 472
+R RD + +L S +SLF+L + + CC Y +L+C
Sbjct: 16 VRSRDHRVILSSL-FSLLSSLFSLPSLFLFFCCCYCQLIC 54
>At2g15350.1 68415.m01756 xyloglucan fucosyltransferase, putative
(FUT10) identical to SP|Q9SJP6 Putative
fucosyltransferase 10 (EC 2.4.1.-) (AtFUT10) (Fragment)
{Arabidopsis thaliana}; similar to xyloglucan
fucosyltransferase GI:5231145 from [Arabidopsis
thaliana]
Length = 440
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Frame = +2
Query: 608 FPGKSWALPRDY--INSWVSRGYQEPY 682
FPG SW LP D+ +N + GY + Y
Sbjct: 96 FPGTSWLLPLDFPMLNYTYAYGYNKEY 122
>At1g36180.1 68414.m04497 acetyl-CoA carboxylase 2 (ACC2) nearly
identical to acetyl-CoA carboxylase 2 (ACC2)
[Arabidopsis thaliana] GI:11869928
Length = 1755
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +3
Query: 456 TAYKVDKRARGINNNSDSMSLRARTNCSQLMILMCDNAWLD 578
T +D R + N+ D L A T C L L+ DN+ +D
Sbjct: 161 TRLLIDGRTCLLQNDHDPSKLMAETPCKLLRYLVSDNSSID 201
>At1g21610.2 68414.m02703 wound-responsive family protein similar to
wound-responsive protein 14.05 (GI:16506638) [Castanea
sativa]; ESTs gb T42839 and gb|AA395192 come from this
gene
Length = 683
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = -1
Query: 712 PQRPGNLNPDIWFLVTTRHPAIDVVTGQRPGFSR 611
P P N NP++ F + HP +++ T ++P +R
Sbjct: 64 PDPPPNANPNLEFRIAPGHP-VEIETNEQPHSNR 96
>At1g21610.1 68414.m02702 wound-responsive family protein similar to
wound-responsive protein 14.05 (GI:16506638) [Castanea
sativa]; ESTs gb T42839 and gb|AA395192 come from this
gene
Length = 684
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = -1
Query: 712 PQRPGNLNPDIWFLVTTRHPAIDVVTGQRPGFSR 611
P P N NP++ F + HP +++ T ++P +R
Sbjct: 64 PDPPPNANPNLEFRIAPGHP-VEIETNEQPHSNR 96
>At3g63130.1 68416.m07090 RAN GTPase activating protein 1 (RanGAP1)
contains Pfam PF00560: Leucine Rich Repeat domains;
identical to RAN GTPase activating protein 1
(GI:6708466)[Arabidopsis thaliana]
Length = 535
Score = 27.5 bits (58), Expect = 9.4
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = +3
Query: 273 GFTLNLFNTINDAVPDDNI--FFSPFSVYHSLLLAYLSSGGQTEEALRKSLEIEDGLDKI 446
G L N ++A+ + I F S + H L YL + G +E+A R E+ DKI
Sbjct: 208 GSKLRYLNLSDNALGEKGIRAFASLINSQHDLEELYLMNDGISEDAARAVRELLPSTDKI 267
Query: 447 NLM 455
++
Sbjct: 268 RVL 270
>At3g43430.1 68416.m04597 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 167
Score = 27.5 bits (58), Expect = 9.4
Identities = 24/100 (24%), Positives = 40/100 (40%), Gaps = 1/100 (1%)
Frame = +3
Query: 378 SSGGQTEEALRKSLEIEDGLDKINLMTAYKVDKRARGINNNSDSMSLRARTNCSQLMILM 557
SS + + +++SL + D + A D A + + D +R NC+ +
Sbjct: 50 SSPSISSQTIKESLAVSAFRDAVERSPAAINDMCAVCLGDLEDEDEIRELRNCTHVFHRD 109
Query: 558 CDNAWLDLFAEDLETLNFRENP-GRCPVTTSIAGCLVVTK 674
C + WLD + N R P R P+ S VT+
Sbjct: 110 CIDRWLDYECCGGDDDNHRTCPLCRTPLLPSFTDYSTVTQ 149
>At2g15370.1 68415.m01758 xyloglucan fucosyltransferase, putative
(FUT5) identical to SP|Q9SJP4 Probable
fucosyltransferase 5 (EC 2.4.1.-) (AtFUT5) {Arabidopsis
thaliana}; similar to xyloglucan fucosyltransferase
GI:5231145 from [Arabidopsis thaliana]
Length = 533
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Frame = +2
Query: 608 FPGKSWALPRDY--INSWVSRGYQEPY 682
FPG SW LP D+ +N + GY + Y
Sbjct: 187 FPGTSWLLPLDFPMLNYTYAWGYNKEY 213
>At1g77740.1 68414.m09051 1-phosphatidylinositol-4-phosphate
5-kinase, putative / PIP kinase, putative /
PtdIns(4)P-5-kinase, putative / diphosphoinositide
kinase, putative strong similarity to
phosphatidylinositol-4-phosphate 5-kinase AtPIP5K1
[Arabidopsis thaliana] GI:3702691; contains Pfam
profiles PF01504: Phosphatidylinositol-4-phosphate
5-Kinase, PF02493: MORN repeat
Length = 754
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = -2
Query: 615 PGNSKSRDLRQRDQAMHCRTLRSSAANSLFALVNSYYRCCCLYRE-LVCLLY 463
PG S S +D +T++ S L ++ SYY+ C Y LV Y
Sbjct: 452 PGKSGSFFYLTQDDRFMIKTVKKSEVKVLLRMLPSYYKHVCQYENTLVTRFY 503
>At1g21980.1 68414.m02750 1-phosphatidylinositol-4-phosphate
5-kinase, putative / PIP kinase, putative /
PtdIns(4)P-5-kinase, putative / diphosphoinositide
kinase, putative strong similarity to
phosphatidylinositol-4-phosphate 5-kinase AtPIP5K1
[Arabidopsis thaliana] GI:3702691; contains Pfam
profiles PF01504: Phosphatidylinositol-4-phosphate
5-Kinase, PF02493: MORN repeat
Length = 752
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = -2
Query: 615 PGNSKSRDLRQRDQAMHCRTLRSSAANSLFALVNSYYRCCCLY-RELVCLLY 463
PG S S +D +T++ S L ++ SYY+ C Y LV Y
Sbjct: 450 PGKSGSFFYLTQDDRFMIKTVKKSEVKVLLRMLPSYYKHVCQYENSLVTRFY 501
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,627,566
Number of Sequences: 28952
Number of extensions: 323552
Number of successful extensions: 1008
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 983
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1008
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1555552968
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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