Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30650
         (700 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-3472|AAS65085.1|  558|Drosophila melanogaster CG33486-P...    94   2e-19
AY058298-1|AAL13527.1|  659|Drosophila melanogaster GH05975p pro...    31   2.0  
AE014134-1092|AAF52383.2|  659|Drosophila melanogaster CG9528-PA...    31   2.0  

>AE014296-3472|AAS65085.1|  558|Drosophila melanogaster CG33486-PA
           protein.
          Length = 558

 Score = 93.9 bits (223), Expect = 2e-19
 Identities = 42/82 (51%), Positives = 60/82 (73%)
 Frame = +3

Query: 255 NVIYHLESYDITTIRASLPMYLLSKYIKEKTDTTVVFSGEGTDELAQGYIYFRDAPSEKD 434
           ++IYHLE+YD+TT+R SLPM LL++YIK  T   ++ SGEG DE+  GY+YF  APS  D
Sbjct: 316 DIIYHLETYDVTTVRCSLPMLLLARYIKS-TGIKMILSGEGADEIFGGYLYFHKAPSYND 374

Query: 435 AHKESVRLLSDIYLYDGLRADR 500
            H+E V+ +  ++L D LRA++
Sbjct: 375 FHEELVKRVRQLHLSDCLRANK 396



 Score = 49.2 bits (112), Expect = 5e-06
 Identities = 30/67 (44%), Positives = 38/67 (56%), Gaps = 9/67 (13%)
 Frame = +2

Query: 509 AFSLELRVPFLDIQFTHHYLSIPP---------KLRQPQNGRLRKHLLRSSFAKSGLLPD 661
           A  +ELRVPFLD  F +H + I P         K  + Q  RL K++LR++FA    LPD
Sbjct: 400 AKGVELRVPFLDTGFVNHVMQIRPEDKIPGPLNKFGEVQQKRLEKYVLRAAFA-DNYLPD 458

Query: 662 CVLWRHK 682
            VLWR K
Sbjct: 459 EVLWRQK 465



 Score = 48.8 bits (111), Expect = 7e-06
 Identities = 22/75 (29%), Positives = 41/75 (54%)
 Frame = +1

Query: 4   ACRKRLMSDRRIXXXXXXXXXXXXITAIVNYLAKEYKLPYKIQTFAIGMGDSPDLAAART 183
           A R  L  D ++            I +I   + +E    ++++TF++G+ D+PD  AAR+
Sbjct: 232 AVRSHLQCDVQMGALLSGGVDSSLIASIATKIMRERDPNFRLKTFSVGLRDAPDFQAARS 291

Query: 184 VADYLGTEHHEVQFD 228
           VA Y+ ++H E+ F+
Sbjct: 292 VAKYIDSDHKEIIFE 306


>AY058298-1|AAL13527.1|  659|Drosophila melanogaster GH05975p
           protein.
          Length = 659

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 16/59 (27%), Positives = 30/59 (50%)
 Frame = +3

Query: 279 YDITTIRASLPMYLLSKYIKEKTDTTVVFSGEGTDELAQGYIYFRDAPSEKDAHKESVR 455
           +D+        +Y +++ + EK D+ V +      +  +G  YFR+ P+    HKESV+
Sbjct: 544 FDVMRNDLHFTLYRVTQELPEKNDSAVSYFD--LQDFVEGVNYFREEPTLICRHKESVQ 600


>AE014134-1092|AAF52383.2|  659|Drosophila melanogaster CG9528-PA
           protein.
          Length = 659

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 16/59 (27%), Positives = 30/59 (50%)
 Frame = +3

Query: 279 YDITTIRASLPMYLLSKYIKEKTDTTVVFSGEGTDELAQGYIYFRDAPSEKDAHKESVR 455
           +D+        +Y +++ + EK D+ V +      +  +G  YFR+ P+    HKESV+
Sbjct: 544 FDVMRNDLHFTLYRVTQELPEKNDSAVSYFD--LQDFVEGVNYFREEPTLICRHKESVQ 600


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,435,817
Number of Sequences: 53049
Number of extensions: 614911
Number of successful extensions: 1506
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1469
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1504
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)