Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30650
(700 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41034-6|AAU05557.1| 538|Caenorhabditis elegans Hypothetical pr... 91 5e-19
U41034-5|AAA82381.1| 567|Caenorhabditis elegans Hypothetical pr... 91 5e-19
AF022973-3|AAC25799.1| 551|Caenorhabditis elegans Asparaginyl t... 73 1e-13
U41034-7|AAN72427.1| 465|Caenorhabditis elegans Hypothetical pr... 63 2e-10
L16559-6|AAA27931.1| 397|Caenorhabditis elegans Hypothetical pr... 34 0.11
AF106576-1|AAC78177.2| 664|Caenorhabditis elegans Hypothetical ... 29 2.4
Z81039-2|CAB02774.1| 2150|Caenorhabditis elegans Hypothetical pr... 28 7.4
M85149-1|AAA28144.1| 2150|Caenorhabditis elegans zinc finger pro... 28 7.4
AJ277649-1|CAB90211.1| 917|Caenorhabditis elegans CHE-14 protei... 27 9.8
AF067618-5|AAC19198.2| 917|Caenorhabditis elegans Abnormal chem... 27 9.8
>U41034-6|AAU05557.1| 538|Caenorhabditis elegans Hypothetical
protein M02D8.4c protein.
Length = 538
Score = 91.5 bits (217), Expect = 5e-19
Identities = 43/83 (51%), Positives = 61/83 (73%)
Frame = +3
Query: 258 VIYHLESYDITTIRASLPMYLLSKYIKEKTDTTVVFSGEGTDELAQGYIYFRDAPSEKDA 437
+I+HLESYD+T+IRAS PMY LS+ I+ K VV SGEG DE+ GY+YF +APS++D
Sbjct: 305 LIWHLESYDVTSIRASTPMYFLSEEIR-KLGIKVVLSGEGADEIFGGYLYFHNAPSDEDF 363
Query: 438 HKESVRLLSDIYLYDGLRADRTT 506
KE++ + +Y D LRAD+++
Sbjct: 364 QKETIDRVLHLYTSDCLRADKSS 386
Score = 47.6 bits (108), Expect = 9e-06
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Frame = +1
Query: 1 AACRKRLMSDRRIXXXXXXXXXXXXITAIVNYLAKEYKLPYKIQTFAIGMG-DSPDLAAA 177
A+ KRLMSD I +++I + K + + +F+IG+ +SPD+ AA
Sbjct: 220 ASVHKRLMSDAPIGVLLSGGLDSSLVSSIASREMKRRGMA--VHSFSIGVDHNSPDVVAA 277
Query: 178 RTVADYLGTEHHEVQFDENDIRKDLETL 261
R VA ++GT HHE F + K+L L
Sbjct: 278 RKVAKFIGTTHHEFYFSIEEGIKNLRKL 305
Score = 45.6 bits (103), Expect = 3e-05
Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 6/64 (9%)
Frame = +2
Query: 509 AFSLELRVPFLDIQFTHHYLSIPPKLRQPQ---NGR-LRKHLLRSSF--AKSGLLPDCVL 670
A S+E+RVPFLD F +S+ P ++PQ +GR K +LRS+F + LPD +L
Sbjct: 388 AHSVEVRVPFLDKAFVEAAVSLDPAFKRPQKLEDGRNCEKFVLRSAFNTDQYPYLPDEIL 447
Query: 671 WRHK 682
WR K
Sbjct: 448 WRQK 451
>U41034-5|AAA82381.1| 567|Caenorhabditis elegans Hypothetical
protein M02D8.4a protein.
Length = 567
Score = 91.5 bits (217), Expect = 5e-19
Identities = 43/83 (51%), Positives = 61/83 (73%)
Frame = +3
Query: 258 VIYHLESYDITTIRASLPMYLLSKYIKEKTDTTVVFSGEGTDELAQGYIYFRDAPSEKDA 437
+I+HLESYD+T+IRAS PMY LS+ I+ K VV SGEG DE+ GY+YF +APS++D
Sbjct: 305 LIWHLESYDVTSIRASTPMYFLSEEIR-KLGIKVVLSGEGADEIFGGYLYFHNAPSDEDF 363
Query: 438 HKESVRLLSDIYLYDGLRADRTT 506
KE++ + +Y D LRAD+++
Sbjct: 364 QKETIDRVLHLYTSDCLRADKSS 386
Score = 47.6 bits (108), Expect = 9e-06
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Frame = +1
Query: 1 AACRKRLMSDRRIXXXXXXXXXXXXITAIVNYLAKEYKLPYKIQTFAIGMG-DSPDLAAA 177
A+ KRLMSD I +++I + K + + +F+IG+ +SPD+ AA
Sbjct: 220 ASVHKRLMSDAPIGVLLSGGLDSSLVSSIASREMKRRGMA--VHSFSIGVDHNSPDVVAA 277
Query: 178 RTVADYLGTEHHEVQFDENDIRKDLETL 261
R VA ++GT HHE F + K+L L
Sbjct: 278 RKVAKFIGTTHHEFYFSIEEGIKNLRKL 305
Score = 45.6 bits (103), Expect = 3e-05
Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 6/64 (9%)
Frame = +2
Query: 509 AFSLELRVPFLDIQFTHHYLSIPPKLRQPQ---NGR-LRKHLLRSSF--AKSGLLPDCVL 670
A S+E+RVPFLD F +S+ P ++PQ +GR K +LRS+F + LPD +L
Sbjct: 388 AHSVEVRVPFLDKAFVEAAVSLDPAFKRPQKLEDGRNCEKFVLRSAFNTDQYPYLPDEIL 447
Query: 671 WRHK 682
WR K
Sbjct: 448 WRQK 451
>AF022973-3|AAC25799.1| 551|Caenorhabditis elegans Asparaginyl trna
synthetase protein2 protein.
Length = 551
Score = 73.3 bits (172), Expect = 1e-13
Identities = 34/83 (40%), Positives = 51/83 (61%)
Frame = +3
Query: 258 VIYHLESYDITTIRASLPMYLLSKYIKEKTDTTVVFSGEGTDELAQGYIYFRDAPSEKDA 437
V++ LE++D IR + YLL ++I + +D V+ SGEG DEL Y Y + AP+
Sbjct: 300 VVFALETFDPLIIRCGIAHYLLCQHISKSSDVKVLLSGEGADELFGSYAYMQRAPNALHL 359
Query: 438 HKESVRLLSDIYLYDGLRADRTT 506
HKE +R + ++ YD LR DR+T
Sbjct: 360 HKEILRRMHHLHQYDVLRCDRST 382
Score = 48.4 bits (110), Expect = 5e-06
Identities = 28/56 (50%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Frame = +2
Query: 518 LELRVPFLDIQFTHHYLSIPPKLR-QPQNGRLRKHLLRSSFAKSGLLPDCVLWRHK 682
LE+RVPFLD +F +PP + P +L KH+LRS+F G LPD VLWR K
Sbjct: 387 LEIRVPFLDKRFIDLVSRLPPSYKLMPM--KLEKHVLRSAF--EGWLPDEVLWRSK 438
Score = 35.5 bits (78), Expect = 0.037
Identities = 22/66 (33%), Positives = 29/66 (43%)
Frame = +1
Query: 13 KRLMSDRRIXXXXXXXXXXXXITAIVNYLAKEYKLPYKIQTFAIGMGDSPDLAAARTVAD 192
KRLM +R I +I K+ + F++G DSPDL A+ VAD
Sbjct: 223 KRLMGNRNFGFMLSGGLDSSLIASIATRFLKQKPI-----AFSVGFEDSPDLENAKKVAD 277
Query: 193 YLGTEH 210
YL H
Sbjct: 278 YLKIPH 283
>U41034-7|AAN72427.1| 465|Caenorhabditis elegans Hypothetical
protein M02D8.4b protein.
Length = 465
Score = 62.9 bits (146), Expect = 2e-10
Identities = 49/157 (31%), Positives = 78/157 (49%), Gaps = 1/157 (0%)
Frame = +1
Query: 1 AACRKRLMSDRRIXXXXXXXXXXXXITAIVNYLAKEYKLPYKIQTFAIGMG-DSPDLAAA 177
A+ KRLMSD I +++I + K + + +F+IG+ +SPD+ AA
Sbjct: 220 ASVHKRLMSDAPIGVLLSGGLDSSLVSSIASREMKRRGMA--VHSFSIGVDHNSPDVVAA 277
Query: 178 RTVADYLGTEHHEVQFDENDIRKDLETLFTI*NLMI*QLFERVCQCTFCQSILKKKQTQQ 357
R VA ++GT HHE F ++ + +LF I +LM+ F + QCT +++
Sbjct: 278 RKVAKFIGTTHHEFYF-SIEVSRTCVSLFGILSLMMSHPFVLLLQCTSSPKKSGNWESKL 336
Query: 358 WYLAEKEPMN*RKAISTSETHRLKRTHIKRAYVCFLI 468
++L EKE M ISTS RT ++ + F I
Sbjct: 337 FFL-EKELMKSSVDISTSTMPHPMRTFKRKPSIVFFI 372
>L16559-6|AAA27931.1| 397|Caenorhabditis elegans Hypothetical
protein C06E1.8 protein.
Length = 397
Score = 33.9 bits (74), Expect = 0.11
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Frame = +1
Query: 304 VCQCTFCQSILKKKQTQQWYLAEKEPMN*RKAISTSE---THRLKRTHIKRAYVC 459
+C FC S + Q + + RK IS+SE TH K+ HI R Y+C
Sbjct: 55 ICSKVFCHSSSLSRHRMQAHFKSYKCTVCRKDISSSESLRTHMFKQHHISRMYMC 109
>AF106576-1|AAC78177.2| 664|Caenorhabditis elegans Hypothetical
protein W07E6.1 protein.
Length = 664
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +3
Query: 60 IRFLVNHRHCKLSCKGIQIALQNTNFRNRDGRFSRSCSRQNR 185
+ FL+ RHC+L G+ I + R RD RF S S R
Sbjct: 450 VNFLLERRHCELVPTGLSIGVDGYT-RFRDYRFHPSLSMTKR 490
>Z81039-2|CAB02774.1| 2150|Caenorhabditis elegans Hypothetical
protein C25D7.3 protein.
Length = 2150
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = +1
Query: 160 PDLAAARTVADYLGTEHHEVQFDENDIRKDLETLFTI*NLMI 285
P +A TV DY G E H +++ + +LE +F + +++
Sbjct: 396 PQVATIETVRDYSGVEQHRLKYIRPE--NELEIMFQLATVLV 435
>M85149-1|AAA28144.1| 2150|Caenorhabditis elegans zinc finger
protein protein.
Length = 2150
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = +1
Query: 160 PDLAAARTVADYLGTEHHEVQFDENDIRKDLETLFTI*NLMI 285
P +A TV DY G E H +++ + +LE +F + +++
Sbjct: 396 PQVATIETVRDYSGVEQHRLKYIRPE--NELEIMFQLATVLV 435
>AJ277649-1|CAB90211.1| 917|Caenorhabditis elegans CHE-14 protein
protein.
Length = 917
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = -1
Query: 214 RDVPFLNNPPRFW--RLQDLENRPSRLRKFVFC 122
R +PF+N+ P+FW R D ++ R F+ C
Sbjct: 618 RQLPFVNHQPKFWPERFLDWSDKYPCARGFLCC 650
>AF067618-5|AAC19198.2| 917|Caenorhabditis elegans Abnormal
chemotaxis protein 14 protein.
Length = 917
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = -1
Query: 214 RDVPFLNNPPRFW--RLQDLENRPSRLRKFVFC 122
R +PF+N+ P+FW R D ++ R F+ C
Sbjct: 618 RQLPFVNHQPKFWPERFLDWSDKYPCARGFLCC 650
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,849,124
Number of Sequences: 27780
Number of extensions: 326833
Number of successful extensions: 783
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 745
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 777
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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