Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30649
(713 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0) 104 6e-23
SB_19076| Best HMM Match : HECT (HMM E-Value=0) 61 1e-09
SB_6163| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 9e-08
SB_11112| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.057
SB_22045| Best HMM Match : Amelogenin (HMM E-Value=0.23) 35 0.075
SB_59580| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.23
SB_16587| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.69) 32 0.53
SB_32383| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_18968| Best HMM Match : HMG_box (HMM E-Value=1.2e-19) 30 1.6
SB_10020| Best HMM Match : Extensin_2 (HMM E-Value=0.88) 30 2.1
SB_18982| Best HMM Match : M (HMM E-Value=1.1e-06) 29 2.8
SB_4314| Best HMM Match : 4_1_CTD (HMM E-Value=1.8) 29 2.8
SB_29958| Best HMM Match : Pkinase (HMM E-Value=2.6e-08) 29 2.8
SB_21044| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 29 2.8
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_39016| Best HMM Match : Extensin_2 (HMM E-Value=0.53) 29 3.7
SB_29594| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.4e-06) 29 4.9
SB_37483| Best HMM Match : Drf_FH1 (HMM E-Value=6.6) 29 4.9
SB_33821| Best HMM Match : zf-MIZ (HMM E-Value=1.3e-29) 29 4.9
SB_33401| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 29 4.9
SB_52694| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_16714| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_40955| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_22789| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_56087| Best HMM Match : Extensin_2 (HMM E-Value=0.29) 28 8.6
SB_49607| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) 28 8.6
SB_23499| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
SB_40368| Best HMM Match : SASP_gamma (HMM E-Value=2.3) 28 8.6
SB_38456| Best HMM Match : BTB (HMM E-Value=8.8e-26) 28 8.6
SB_27758| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
SB_26832| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
SB_21867| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
>SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 718
Score = 104 bits (250), Expect = 6e-23
Identities = 50/66 (75%), Positives = 57/66 (86%)
Frame = +1
Query: 262 GQEPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHA 441
GQEPL ++LAAA QEQKQMLGERLFPLIQ HPD+AGKITGMLLEIDN+ELLHMLE
Sbjct: 425 GQEPLNPSVLAAATPQEQKQMLGERLFPLIQTNHPDMAGKITGMLLEIDNAELLHMLESR 484
Query: 442 ESLKAK 459
++L+ K
Sbjct: 485 DALQMK 490
>SB_19076| Best HMM Match : HECT (HMM E-Value=0)
Length = 2018
Score = 60.9 bits (141), Expect = 1e-09
Identities = 29/61 (47%), Positives = 42/61 (68%)
Frame = +1
Query: 301 PLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAV 480
PL +Q LGERL+P + + P LA +ITGMLLE+ ++LL +L ++L +VDEAV V
Sbjct: 1644 PLPYHRQSLGERLYPRVHALKPALASRITGMLLELSPAQLLLLLASEDTLVQRVDEAVDV 1703
Query: 481 L 483
+
Sbjct: 1704 I 1704
>SB_6163| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 346
Score = 54.4 bits (125), Expect = 9e-08
Identities = 28/72 (38%), Positives = 46/72 (63%)
Frame = +1
Query: 319 QMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAVLQAHQA 498
Q LG+R++ +Q+++P LA ++TGMLLE+ +L H+L+ E L + A VL ++
Sbjct: 79 QSLGDRVYGTVQQLYPTLAERVTGMLLEMPADQLNHLLDSREGLLEHIHTAAHVLM--ES 136
Query: 499 KQQELKKNKYSE 534
K+QE K K +E
Sbjct: 137 KRQENIKGKDTE 148
Score = 41.1 bits (92), Expect = 9e-04
Identities = 18/41 (43%), Positives = 29/41 (70%)
Frame = +1
Query: 310 EQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHML 432
EQK+ +GE++ I+++HP A ITGMLLE+ +LL+ +
Sbjct: 288 EQKEFIGEKIHDEIRKLHPGHADVITGMLLEMGVDQLLNTI 328
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/68 (32%), Positives = 38/68 (55%)
Frame = +1
Query: 307 QEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAVLQ 486
++ K ++GE ++ + +P A KITGMLLE++ L + + + L + EAV L
Sbjct: 174 EDLKSIIGENIYSQLVEKYPKDADKITGMLLEMELDLLQKVSQDPDLLGQRATEAVETL- 232
Query: 487 AHQAKQQE 510
HQ +Q+
Sbjct: 233 -HQMSKQQ 239
Score = 35.9 bits (79), Expect = 0.033
Identities = 16/53 (30%), Positives = 32/53 (60%)
Frame = +1
Query: 325 LGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAVL 483
LG +++ ++ ++P+ A KITGMLL+ E+ +L + L ++ A ++L
Sbjct: 15 LGAKIYDVVFEIYPNEADKITGMLLDGGEEEVASLLSDEKRLNERIIAAASLL 67
>SB_11112| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 464
Score = 35.1 bits (77), Expect = 0.057
Identities = 24/81 (29%), Positives = 35/81 (43%)
Frame = +2
Query: 8 VRPSTQAASAYANMQPTYRPAPRAPAQSTIRTSLDARPITGQQGVAAAAASIRTPLVSQS 187
+ P S A Q T P+ +AP QST + Q+ + S R P S
Sbjct: 273 IAPYQSTPSQQAPYQST--PSQQAPYQSTPSQQAPYQSTPSQRAPYQSTPSQRAPYQSTP 330
Query: 188 SRPANYKYTPNMRNPPAPQPA 250
S+ A+Y+ TP+ R P P+
Sbjct: 331 SQQASYQSTPSQRAPYQSTPS 351
Score = 34.3 bits (75), Expect = 0.100
Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Frame = +2
Query: 14 PSTQAA-SAYANMQPTYR--PAPRAPAQSTIRTSLDARPITGQQGVAAAAASIRTPLVSQ 184
PS QA + + Q Y+ PA +AP QST + QQ + S + P S
Sbjct: 240 PSQQAPYQSTPSQQAPYQSTPAQQAPYQSTPSQIAPYQSTPSQQAPYQSTPSQQAPYQST 299
Query: 185 SSRPANYKYTPNMRNPPAPQPA 250
S+ A Y+ TP+ R P P+
Sbjct: 300 PSQQAPYQSTPSQRAPYQSTPS 321
Score = 29.5 bits (63), Expect = 2.8
Identities = 18/65 (27%), Positives = 29/65 (44%)
Frame = +2
Query: 65 PAPRAPAQSTIRTSLDARPITGQQGVAAAAASIRTPLVSQSSRPANYKYTPNMRNPPAPQ 244
P+ +AP QST + QQ + S + P S S+ A Y+ TP + P
Sbjct: 210 PSQQAPYQSTPSQRAPYQSTPSQQAPYQSTPSQQAPYQSTPSQQAPYQSTPAQQAPYQST 269
Query: 245 PAVLS 259
P+ ++
Sbjct: 270 PSQIA 274
Score = 29.5 bits (63), Expect = 2.8
Identities = 18/62 (29%), Positives = 27/62 (43%)
Frame = +2
Query: 65 PAPRAPAQSTIRTSLDARPITGQQGVAAAAASIRTPLVSQSSRPANYKYTPNMRNPPAPQ 244
P+ RAP QST + QQ + S + P S ++ A Y+ TP+ P
Sbjct: 220 PSQRAPYQSTPSQQAPYQSTPSQQAPYQSTPSQQAPYQSTPAQQAPYQSTPSQIAPYQST 279
Query: 245 PA 250
P+
Sbjct: 280 PS 281
Score = 29.1 bits (62), Expect = 3.7
Identities = 22/79 (27%), Positives = 33/79 (41%)
Frame = +2
Query: 14 PSTQAASAYANMQPTYRPAPRAPAQSTIRTSLDARPITGQQGVAAAAASIRTPLVSQSSR 193
P S A Q T P+ +AP QST + QQ + + + P S S+
Sbjct: 215 PYQSTPSQRAPYQST--PSQQAPYQSTPSQQAPYQSTPSQQAPYQSTPAQQAPYQSTPSQ 272
Query: 194 PANYKYTPNMRNPPAPQPA 250
A Y+ TP+ + P P+
Sbjct: 273 IAPYQSTPSQQAPYQSTPS 291
>SB_22045| Best HMM Match : Amelogenin (HMM E-Value=0.23)
Length = 149
Score = 34.7 bits (76), Expect = 0.075
Identities = 25/79 (31%), Positives = 32/79 (40%), Gaps = 2/79 (2%)
Frame = +2
Query: 11 RPSTQAASAYANMQPTYRPAPRAPAQSTIRTSLDARPITGQQGVAAAAASIRTPLVS--Q 184
RP T A + A Y P AP QS + + RPIT P+ S Q
Sbjct: 47 RPITSEAQSPAPPNHQYTPITSAP-QSPVPPNHQCRPITSTPQSPVPPNHQHRPITSAAQ 105
Query: 185 SSRPANYKYTPNMRNPPAP 241
S P N++Y P P +P
Sbjct: 106 SPVPPNHQYRPITSTPQSP 124
Score = 32.7 bits (71), Expect = 0.30
Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = +2
Query: 44 NMQPTYRPAPRAPAQSTIRTSLDARPITGQQGVAAAAASIRTPLVS--QSSRPANYKYTP 217
N Y PA + AQS + ++ RPIT + A TP+ S QS P N++ P
Sbjct: 24 NPNHAYSPAT-STAQSPVPSNHQHRPITSEAQSPAPPNHQYTPITSAPQSPVPPNHQCRP 82
Query: 218 NMRNPPAPQP 247
P +P P
Sbjct: 83 ITSTPQSPVP 92
>SB_59580| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 999
Score = 33.1 bits (72), Expect = 0.23
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = +1
Query: 433 EHAESLKAKVDEAVAVLQAHQAKQQELKKNKYSEK 537
++ ES K+K DE + +AH+AK QELKK K E+
Sbjct: 841 KYFESWKSKKDEELK--EAHRAKMQELKKQKQKEE 873
>SB_16587| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.69)
Length = 404
Score = 31.9 bits (69), Expect = 0.53
Identities = 25/87 (28%), Positives = 34/87 (39%), Gaps = 5/87 (5%)
Frame = +2
Query: 5 PVRPSTQAASAYANMQPTY-RPAPRAPAQSTIRTSLDARPITGQQGVAAAAASIRTPLVS 181
P P T A+ A + PT R P A + + + P + VAA R V
Sbjct: 239 PAAPVTPTAAPAARVTPTAARVTPTAAPAAPVTPTAAPAPAQSHEEVAAPNLRKRHVFVP 298
Query: 182 Q----SSRPANYKYTPNMRNPPAPQPA 250
+ S P N + P +P PQPA
Sbjct: 299 ETDDDSPSPTNAEQHPCQTSPATPQPA 325
>SB_32383| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1850
Score = 30.7 bits (66), Expect = 1.2
Identities = 30/96 (31%), Positives = 42/96 (43%), Gaps = 3/96 (3%)
Frame = +2
Query: 5 PVRPSTQAASAY---ANMQPTYRPAPRAPAQSTIRTSLDARPITGQQGVAAAAASIRTPL 175
PV P+ A+AY A + PT PA PAQS + A P T A A + T
Sbjct: 1334 PVNPTAAPATAYPAQAPVNPTAAPATAYPAQSPFNPT--AAPATAYPAQAPANPTAGTAY 1391
Query: 176 VSQSSRPANYKYTPNMRNPPAPQPAVLSKDKNL*PL 283
+Q+ P N P + A QPA + ++ P+
Sbjct: 1392 PTQA--PFNTTAAPVYQT--AGQPAQSNPTQSAQPM 1423
>SB_18968| Best HMM Match : HMG_box (HMM E-Value=1.2e-19)
Length = 1204
Score = 30.3 bits (65), Expect = 1.6
Identities = 24/86 (27%), Positives = 39/86 (45%)
Frame = +2
Query: 17 STQAASAYANMQPTYRPAPRAPAQSTIRTSLDARPITGQQGVAAAAASIRTPLVSQSSRP 196
S Q AS M P + +PR Q + P TG Q + + +R+P+ + S +
Sbjct: 425 SPQIASPQMGMSPGHANSPRPIPQ------FPSNP-TGMQTSSMPQSPVRSPMNAPSPQA 477
Query: 197 ANYKYTPNMRNPPAPQPAVLSKDKNL 274
A +RN +P V+SK K++
Sbjct: 478 ARTPQPSAVRNLSSPGSQVVSKGKDV 503
>SB_10020| Best HMM Match : Extensin_2 (HMM E-Value=0.88)
Length = 379
Score = 29.9 bits (64), Expect = 2.1
Identities = 23/81 (28%), Positives = 32/81 (39%)
Frame = +2
Query: 2 PPVRPSTQAASAYANMQPTYRPAPRAPAQSTIRTSLDARPITGQQGVAAAAASIRTPLVS 181
P + S S A Y+P PR ++ SL ARP + + S P +
Sbjct: 76 PRIPTSLSLVSLQAPPSYPYKPLPRIHTSPSL-VSLQARPSYPYKPLPRIPTS---PSLV 131
Query: 182 QSSRPANYKYTPNMRNPPAPQ 244
PA+Y Y P R P P+
Sbjct: 132 SLQAPASYLYKPLPRYKPLPR 152
>SB_18982| Best HMM Match : M (HMM E-Value=1.1e-06)
Length = 825
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/37 (37%), Positives = 25/37 (67%)
Frame = +1
Query: 418 LLHMLEHAESLKAKVDEAVAVLQAHQAKQQELKKNKY 528
L H LE E+L+ +V+E AVL+ +AK +L+ +++
Sbjct: 646 LYHQLERNETLEVQVEELTAVLEQWEAK-SDLRDSEF 681
>SB_4314| Best HMM Match : 4_1_CTD (HMM E-Value=1.8)
Length = 922
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +2
Query: 2 PPVRPSTQAASAYANMQPTYRPAPRAPAQSTIRTSLDARPITGQQGVAAAAAS 160
PP TQA +A T P PR+P +S+ RP +G++ +A+++
Sbjct: 752 PPSSQKTQANTASQASVDTASPLPRSPKRSSPILPPINRPASGRKSTTSASSA 804
>SB_29958| Best HMM Match : Pkinase (HMM E-Value=2.6e-08)
Length = 857
Score = 29.5 bits (63), Expect = 2.8
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = -1
Query: 248 LVVELVGCACLVYIYNWLGDCFE 180
L+ +L GC ++ +YNWL +C+E
Sbjct: 561 LLNQLQGCDHIIKLYNWLRNCWE 583
>SB_21044| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 1507
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Frame = -1
Query: 317 FCSWSGAAASIVEVRGSCPWIAL-LVVELVGCACLVY 210
F W G VE G CP + + GC C++Y
Sbjct: 695 FSEWGGGGGGAVEPAGYCPRVIYDCPCVIYGCPCVIY 731
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/37 (37%), Positives = 25/37 (67%)
Frame = +1
Query: 418 LLHMLEHAESLKAKVDEAVAVLQAHQAKQQELKKNKY 528
L H LE E+L+ +V+E AVL+ +AK +L+ +++
Sbjct: 624 LYHQLERNETLEVQVEELTAVLEQWEAK-SDLRDSEF 659
>SB_39016| Best HMM Match : Extensin_2 (HMM E-Value=0.53)
Length = 287
Score = 29.1 bits (62), Expect = 3.7
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 5/64 (7%)
Frame = +2
Query: 65 PAPRAPAQSTIRTSLDARPITGQQGVAAAAASIRTPLVSQSSRPANYKYTPNMR-----N 229
PAP AP+ + + + P T V +A QSS ++Y Y P +
Sbjct: 115 PAPAAPSAAAAPAPVRSVPSTSPSSVRSATPYYPQTQQQQSSVSSSYSYYPRAAPSYYYS 174
Query: 230 PPAP 241
PPAP
Sbjct: 175 PPAP 178
Score = 28.3 bits (60), Expect = 6.5
Identities = 21/72 (29%), Positives = 29/72 (40%), Gaps = 1/72 (1%)
Frame = +2
Query: 5 PVRPSTQAASAYANMQPTYRPAPRAPAQSTIRTSLDARPITGQQGVAAAAASIRT-PLVS 181
P + +A A Q PAP A A + + + P AAA A +R+ P S
Sbjct: 77 PAQAFAPSAPLAAPAQVAAAPAPAAAAPAPVPAAAAPAPAPAAPSAAAAPAPVRSVPSTS 136
Query: 182 QSSRPANYKYTP 217
SS + Y P
Sbjct: 137 PSSVRSATPYYP 148
>SB_29594| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.4e-06)
Length = 1292
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/55 (25%), Positives = 30/55 (54%)
Frame = +1
Query: 373 AGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAVLQAHQAKQQELKKNKYSEK 537
A +++ L+ N+EL++ + E ++ K +E + +++ ELKK+ EK
Sbjct: 903 AAQVSETTLQRINNELINTVSEIEEMRVKAEEEKEKSCSLESQLDELKKSSEEEK 957
>SB_37483| Best HMM Match : Drf_FH1 (HMM E-Value=6.6)
Length = 237
Score = 28.7 bits (61), Expect = 4.9
Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = +2
Query: 65 PAPRAPAQSTIRTSLDARPITGQQGVAAAAASIRTPLVSQSSRPANY--KYTP 217
P P AP + T A P QQ AAS P S +PA+Y YTP
Sbjct: 46 PTPVAPPSTVPYT---ATPAPAQQAPHTTAASQPAPYTPASGQPASYTPAYTP 95
>SB_33821| Best HMM Match : zf-MIZ (HMM E-Value=1.3e-29)
Length = 1202
Score = 28.7 bits (61), Expect = 4.9
Identities = 19/70 (27%), Positives = 23/70 (32%), Gaps = 2/70 (2%)
Frame = +2
Query: 44 NMQPTYRPAPRAPAQSTIRTSLDARPITGQQGVAAAAASIRTPLVSQSSRPANYKYTPNM 223
N P P P APA + A A A A+ L Q P Y+ N
Sbjct: 438 NAPPNASPFPNAPANPAAAAAAAAVAAAAATATATATATATAALQEQQMDPYGYQTGQNQ 497
Query: 224 --RNPPAPQP 247
+N P P
Sbjct: 498 YNQNQQVPHP 507
>SB_33401| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 4277
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/46 (26%), Positives = 22/46 (47%)
Frame = +2
Query: 134 QGVAAAAASIRTPLVSQSSRPANYKYTPNMRNPPAPQPAVLSKDKN 271
+ + A A I + S+ + + + PPAPQ ++S+D N
Sbjct: 4224 RSLVARAGQIAQAICSEQKKEIDLHKRMRLARPPAPQQPIISQDTN 4269
>SB_52694| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1450
Score = 28.3 bits (60), Expect = 6.5
Identities = 23/108 (21%), Positives = 44/108 (40%)
Frame = +1
Query: 220 HAQPTSSTTSSAIQGQEPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLL 399
+ QPT+ + I E + S ++ G +L P+ R P+ GK+ +
Sbjct: 378 YCQPTADLETLGIGSYEAIASEEKYLEQSWQECTERGIKL-PMHYRYEPNARGKVIKQIT 436
Query: 400 EIDNSELLHMLEHAESLKAKVDEAVAVLQAHQAKQQELKKNKYSEKLA 543
E E E ++ VD+ + A + +++E ++ S LA
Sbjct: 437 NFLRQEDEEKNEDVELVEEDVDDTAHNITADEGEEKEEEERVISVSLA 484
>SB_16714| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 961
Score = 28.3 bits (60), Expect = 6.5
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -1
Query: 278 VRGSCPWIALLVVELVGCACLVYIY 204
V G C I LL++ LV C + YIY
Sbjct: 723 VDGYCSGIPLLIIALVECIAISYIY 747
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 28.3 bits (60), Expect = 6.5
Identities = 27/114 (23%), Positives = 35/114 (30%), Gaps = 6/114 (5%)
Frame = +2
Query: 2 PPVRPSTQAASAYANMQPT-YRPAPRAPAQSTIRTSLDARPITGQQGVAAAAASIRTPLV 178
PP P+T + A P P P P RP A+ + TP
Sbjct: 894 PPTTPTTPKPTTPAPPPPLPLAPEPPPPLPPPPPPIQTTRPTVPTTPTTQASTTRPTPPP 953
Query: 179 SQSSRPANYKYT-----PNMRNPPAPQPAVLSKDKNL*PLLCLQQHHSRNRNRC 325
S+ P T P PP P P + L P C+ H + C
Sbjct: 954 PTSALPPPIPATQVPPPPLPPLPPPPPPVQTTTAPTLPPASCMPTHEGTSNGAC 1007
>SB_40955| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 383
Score = 28.3 bits (60), Expect = 6.5
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +3
Query: 243 NQQCYPRTRTSDLYYACSSTTPGT 314
++ C+ RT+T+D+ Y C PG+
Sbjct: 232 SRTCFIRTQTNDMLYHCCDAQPGS 255
>SB_22789| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 796
Score = 28.3 bits (60), Expect = 6.5
Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = +2
Query: 59 YRPAPRAP-AQSTIRTSLDARPITGQQGVAAAAASIRTPLVSQSSRPANYKYTPNMRNPP 235
YR R P +QS++ R + G A+A RTP+ + S + Y R PP
Sbjct: 245 YRSPRRGPGSQSSVEDHRPGRGYGSRGGYASADEGPRTPITNGMSGYMSDSYAHGPRTPP 304
>SB_56087| Best HMM Match : Extensin_2 (HMM E-Value=0.29)
Length = 403
Score = 27.9 bits (59), Expect = 8.6
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 3/89 (3%)
Frame = +2
Query: 2 PPVRPSTQAASAYANMQPTYRPAPRAPAQSTIRTSLDARPITGQQGVAAAAASIRTPL-- 175
PP+ S S A+ Y+P PR P S SL A P + A+++ PL
Sbjct: 225 PPIPTSLFLVSLQASPSYPYKPLPRIPT-SLFLVSLQASPSPSLVHLQASSSYPYKPLPR 283
Query: 176 VSQSSRPANYKYTPNMRNPPAPQ-PAVLS 259
++ S + + +P+ P P+ P LS
Sbjct: 284 ITTSLFLVSLQASPSYPYNPLPRIPTSLS 312
>SB_49607| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4538
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +3
Query: 255 YPRTRTSDLYYACSSTTPGTETDAWGTTVSTYSENAP*F 371
YPR R D Y+ C T TD + S+ + +P F
Sbjct: 2522 YPRIRDLDFYWFCYKKTRNVTTDIDALSASSPLQQSPEF 2560
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -1
Query: 311 SWSGAAASIVEVRGSCPWIALLVVELVGCACLVYIYNW 198
+W + A V G C ++ ++V +V C +IYNW
Sbjct: 836 NWGSSPAGDDRVVGYC-YLPNIIVFIVPCTVRFFIYNW 872
>SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)
Length = 1439
Score = 27.9 bits (59), Expect = 8.6
Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 8/77 (10%)
Frame = +2
Query: 53 PTYRPAPRAPAQST-IRTSLDARPITGQQGVAAAAASIRTPLVSQSSRPANYKY------ 211
P P P A S+ + T++ A P V A ++ + TP+ P +
Sbjct: 493 PVAAPPPSVFAPSSGVPTTVTAPPAAPPPSVFAPSSGVPTPVTEPPPAPPPSVFAPSSGV 552
Query: 212 -TPNMRNPPAPQPAVLS 259
TP PPAP P+V +
Sbjct: 553 PTPVTAPPPAPPPSVFA 569
>SB_23499| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 142
Score = 27.9 bits (59), Expect = 8.6
Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 4/87 (4%)
Frame = +2
Query: 2 PPVRPSTQAA---SAYANMQPTYRPAPRAPAQSTIR-TSLDARPITGQQGVAAAAASIRT 169
P ++PS Q + S + ++QP +PA + +Q + S A Q A+
Sbjct: 23 PSIQPSIQPSIHPSIHPSIQPASQPASQPASQPASQPASQPASQPASQPASQPASQPASQ 82
Query: 170 PLVSQSSRPANYKYTPNMRNPPAPQPA 250
P +S+PA+ + + PA QPA
Sbjct: 83 PASQPASQPAS-QPASQPASQPASQPA 108
>SB_40368| Best HMM Match : SASP_gamma (HMM E-Value=2.3)
Length = 325
Score = 27.9 bits (59), Expect = 8.6
Identities = 20/85 (23%), Positives = 36/85 (42%)
Frame = +2
Query: 5 PVRPSTQAASAYANMQPTYRPAPRAPAQSTIRTSLDARPITGQQGVAAAAASIRTPLVSQ 184
P P+ + + QP + P PA+ R+S + +P+ + + A R+ +
Sbjct: 111 PTSPAEKPHQSSKETQPVQQRNPAGPAKKPSRSSKETQPVQQRNPASPAKKHHRSSKETP 170
Query: 185 SSRPANYKYTPNMRNPPAPQPAVLS 259
+S A P+ PP QP L+
Sbjct: 171 TSL-AEKPSWPSRETPPV-QPRNLA 193
>SB_38456| Best HMM Match : BTB (HMM E-Value=8.8e-26)
Length = 1410
Score = 27.9 bits (59), Expect = 8.6
Identities = 17/59 (28%), Positives = 22/59 (37%)
Frame = +2
Query: 71 PRAPAQSTIRTSLDARPITGQQGVAAAAASIRTPLVSQSSRPANYKYTPNMRNPPAPQP 247
P P S + D+ P T + + S TP Q P K P + PP P P
Sbjct: 309 PSEPESSNKSSEPDSTPATNAP--PSDSPSTTTPTTPQPPTPTTPKTHPQLGPPPPPPP 365
>SB_27758| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1926
Score = 27.9 bits (59), Expect = 8.6
Identities = 22/77 (28%), Positives = 30/77 (38%)
Frame = +2
Query: 2 PPVRPSTQAASAYANMQPTYRPAPRAPAQSTIRTSLDARPITGQQGVAAAAASIRTPLVS 181
P R A A PTYR +AP ++T R L P QG A +I V
Sbjct: 1753 PTPRTQQPPARAPPAQPPTYRNPAQAPFEATPREHLPKAPQASGQG-AFPIGAIPRGAVP 1811
Query: 182 QSSRPANYKYTPNMRNP 232
+ + P ++R P
Sbjct: 1812 RGAVPIRSTGDGSLRQP 1828
>SB_26832| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 27.9 bits (59), Expect = 8.6
Identities = 17/62 (27%), Positives = 27/62 (43%)
Frame = +2
Query: 65 PAPRAPAQSTIRTSLDARPITGQQGVAAAAASIRTPLVSQSSRPANYKYTPNMRNPPAPQ 244
P RAP S + + +G + A A +R +V ++ RP + + PPA
Sbjct: 567 PVRRAPRPSESSAAAHSSERSGGKAAAEGEAWVR--VVDENVRPPSQAKVTTTKTPPATA 624
Query: 245 PA 250
PA
Sbjct: 625 PA 626
>SB_21867| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 864
Score = 27.9 bits (59), Expect = 8.6
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +2
Query: 149 AAASIRTPLVSQSSRPANYKYTPNMR-NPPAPQPA 250
AAAS RTP V+Q + A + TP+ R PA P+
Sbjct: 331 AAASTRTPAVNQRASEAKRRKTPSWRILAPALSPS 365
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,536,459
Number of Sequences: 59808
Number of extensions: 386210
Number of successful extensions: 1508
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1317
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1502
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1889780269
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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