Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30649
(713 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubu... 28 0.33
DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein. 25 2.4
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein. 25 3.1
AY146721-1|AAO12081.1| 144|Anopheles gambiae odorant-binding pr... 25 3.1
AJ439060-6|CAD27757.1| 297|Anopheles gambiae hypothetical prote... 25 3.1
AJ292755-1|CAC00630.1| 837|Anopheles gambiae integrin beta subu... 25 3.1
AF437884-1|AAL84179.1| 144|Anopheles gambiae odorant binding pr... 25 3.1
AY146729-1|AAO12089.1| 156|Anopheles gambiae odorant-binding pr... 24 4.1
AY263177-1|AAP78792.1| 699|Anopheles gambiae TmcC-like protein ... 24 5.4
AJ302656-1|CAC35521.1| 385|Anopheles gambiae gSG1b protein prot... 24 5.4
CR954256-3|CAJ14144.1| 659|Anopheles gambiae cyclin protein. 23 7.2
AJ439353-9|CAD27931.1| 391|Anopheles gambiae transcription fact... 23 7.2
AY873992-1|AAW71999.1| 259|Anopheles gambiae nanos protein. 23 9.5
AY724802-1|AAW50311.1| 134|Anopheles gambiae G protein alpha su... 23 9.5
AY724801-1|AAW50310.1| 134|Anopheles gambiae G protein alpha su... 23 9.5
AY583530-1|AAS93544.1| 260|Anopheles gambiae NOS protein protein. 23 9.5
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T... 23 9.5
>AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubule
binding protein protein.
Length = 838
Score = 27.9 bits (59), Expect = 0.33
Identities = 20/73 (27%), Positives = 30/73 (41%)
Frame = +2
Query: 101 TSLDARPITGQQGVAAAAASIRTPLVSQSSRPANYKYTPNMRNPPAPQPAVLSKDKNL*P 280
T L A P +S+ T ++ S+P ++ P R P+V K + P
Sbjct: 78 TVLAASPAPQPSLAPVVPSSVVTAPPARPSQPPTTRFAPEPRAEVKFVPSVPLKTPPVRP 137
Query: 281 LLCLQQHHSRNRN 319
LL QQ H R+
Sbjct: 138 LLPQQQQHPHQRD 150
>DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein.
Length = 889
Score = 25.0 bits (52), Expect = 2.4
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +2
Query: 194 PANYKYTPNMRNPPAPQP 247
PA + PN + PPAP P
Sbjct: 570 PAGFPNLPNAQPPPAPPP 587
>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
Length = 1664
Score = 24.6 bits (51), Expect = 3.1
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Frame = +2
Query: 56 TYRPAPRAPAQSTIRTSLDARPITGQQGVAAAAASIRTPLV--SQSSRPANYKYTP 217
T PAP AP+ ST S+ AR +T + R P + SS+P + TP
Sbjct: 1309 TSEPAPAAPSNSTPSRSV-ARIVTSFTDSPLFSRRNRQPKAPDADSSKPQSESNTP 1363
>AY146721-1|AAO12081.1| 144|Anopheles gambiae odorant-binding
protein AgamOBP1 protein.
Length = 144
Score = 24.6 bits (51), Expect = 3.1
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3
Query: 345 WKQSFPKHLFL 313
WKQS PKH FL
Sbjct: 133 WKQSDPKHYFL 143
>AJ439060-6|CAD27757.1| 297|Anopheles gambiae hypothetical protein
protein.
Length = 297
Score = 24.6 bits (51), Expect = 3.1
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = +1
Query: 418 LLHMLEHAESLKAKVDEAVAVLQAHQAKQQELKKNKYSEKLAGIKK 555
LLH E +SLK + + + HQ + KN+ K + + K
Sbjct: 193 LLHRQEAGQSLKGPSNNMLQANKPHQQVDEHELKNRIISKYSYVDK 238
>AJ292755-1|CAC00630.1| 837|Anopheles gambiae integrin beta subunit
protein.
Length = 837
Score = 24.6 bits (51), Expect = 3.1
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -2
Query: 94 CRLGRSSRCWSVSGLHICICRCCLCAR 14
CR+ +S SG C+C C+C R
Sbjct: 551 CRMSNASE--ECSGRGQCVCGVCVCER 575
>AF437884-1|AAL84179.1| 144|Anopheles gambiae odorant binding
protein protein.
Length = 144
Score = 24.6 bits (51), Expect = 3.1
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3
Query: 345 WKQSFPKHLFL 313
WKQS PKH FL
Sbjct: 133 WKQSDPKHYFL 143
>AY146729-1|AAO12089.1| 156|Anopheles gambiae odorant-binding
protein AgamOBP5 protein.
Length = 156
Score = 24.2 bits (50), Expect = 4.1
Identities = 5/7 (71%), Positives = 5/7 (71%)
Frame = -2
Query: 250 CWLWSWW 230
CW W WW
Sbjct: 7 CWWWRWW 13
>AY263177-1|AAP78792.1| 699|Anopheles gambiae TmcC-like protein
protein.
Length = 699
Score = 23.8 bits (49), Expect = 5.4
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +2
Query: 32 SAYANMQPTYRPAPRAPAQSTIRTSLDARP 121
SAY QP P PR +QS A P
Sbjct: 632 SAYQQQQPPVVPPPRTNSQSQASEPTPALP 661
>AJ302656-1|CAC35521.1| 385|Anopheles gambiae gSG1b protein
protein.
Length = 385
Score = 23.8 bits (49), Expect = 5.4
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 454 AKVDEAVAVLQAHQAKQQELKK 519
AK+++AVAV++ H KQ K
Sbjct: 65 AKIEQAVAVIKDHLEKQAAATK 86
>CR954256-3|CAJ14144.1| 659|Anopheles gambiae cyclin protein.
Length = 659
Score = 23.4 bits (48), Expect = 7.2
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +2
Query: 80 PAQSTIRTSLDARPITGQQGVAAAAASIRTPLVSQSSRPANYKYTPN-MRNPPA 238
PA+ +R L R I + AAAAA +R + P RNPPA
Sbjct: 463 PARGHVRARLTRRTIPPTRVAAAAAAPEGRRRRRAIARARRRRCRPRARRNPPA 516
>AJ439353-9|CAD27931.1| 391|Anopheles gambiae transcription factor
protein.
Length = 391
Score = 23.4 bits (48), Expect = 7.2
Identities = 14/50 (28%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = +2
Query: 107 LDARPITGQQGVAAAAASIRTPLVSQSSRPANYKYT-PNMRNPPAPQPAV 253
L+ IT ++ + + R L Q RP N K+T P +R P +
Sbjct: 175 LEEAEITERENIKSLERFRRMELEKQKIRPTNKKFTGPTIRYFSTAMPII 224
>AY873992-1|AAW71999.1| 259|Anopheles gambiae nanos protein.
Length = 259
Score = 23.0 bits (47), Expect = 9.5
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +1
Query: 400 EIDNSELLHMLEHAESLKAKVDEAVAVLQAHQAKQQELKK 519
E+D SEL+ ++ A LK V + ++ Q+ + L+K
Sbjct: 105 EMDGSELMEAVDVAAELKNMVLQDISNQPKQQSTTRPLRK 144
>AY724802-1|AAW50311.1| 134|Anopheles gambiae G protein alpha
subunit AgOn protein.
Length = 134
Score = 23.0 bits (47), Expect = 9.5
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -2
Query: 73 RCWSVSGLHICICR 32
R WS SG+ C CR
Sbjct: 117 RLWSDSGVQECFCR 130
>AY724801-1|AAW50310.1| 134|Anopheles gambiae G protein alpha
subunit AgOa protein.
Length = 134
Score = 23.0 bits (47), Expect = 9.5
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -2
Query: 73 RCWSVSGLHICICR 32
R WS SG+ C CR
Sbjct: 117 RLWSDSGVQECFCR 130
>AY583530-1|AAS93544.1| 260|Anopheles gambiae NOS protein protein.
Length = 260
Score = 23.0 bits (47), Expect = 9.5
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +1
Query: 400 EIDNSELLHMLEHAESLKAKVDEAVAVLQAHQAKQQELKK 519
E+D SEL+ ++ A LK V + ++ Q+ + L+K
Sbjct: 106 EMDGSELMEAVDVAAELKNMVLQDISNQPKQQSTTRPLRK 145
>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1978
Score = 23.0 bits (47), Expect = 9.5
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +2
Query: 71 PRAPAQSTIRTSLDAR-PITGQQGVAAAAASIRTPLVSQSSRPA 199
P P S+ +SL I G +AAAAA+ P + + RP+
Sbjct: 801 PGNPLSSSTSSSLYPNGSIGGVNSLAAAAAATLIPTATTNVRPS 844
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 672,343
Number of Sequences: 2352
Number of extensions: 12783
Number of successful extensions: 52
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 52
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 73177125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -