Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30647
         (720 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    46   0.001
UniRef50_Q41H11 Cluster: Putative uncharacterized protein; n=1; ...    33   7.1  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 46.0 bits (104), Expect = 0.001
 Identities = 18/21 (85%), Positives = 21/21 (100%)
 Frame = +3

Query: 390 LLLRWVEKLTAHLMLSGYWSP 452
           LLLRWV++LTAHL+LSGYWSP
Sbjct: 155 LLLRWVDELTAHLVLSGYWSP 175



 Score = 33.1 bits (72), Expect = 7.1
 Identities = 13/17 (76%), Positives = 14/17 (82%)
 Frame = +2

Query: 449 PIDIYDVNAPPTLRYKF 499
           P  +YDVNAPPT RYKF
Sbjct: 175 PRHLYDVNAPPTSRYKF 191


>UniRef50_Q41H11 Cluster: Putative uncharacterized protein; n=1;
           Exiguobacterium sibiricum 255-15|Rep: Putative
           uncharacterized protein - Exiguobacterium sibiricum
           255-15
          Length = 314

 Score = 33.1 bits (72), Expect = 7.1
 Identities = 19/51 (37%), Positives = 27/51 (52%)
 Frame = +3

Query: 534 LSNRNALQLHGRNRAGRWYLPAQTSLEVLPPVKKGALNPIVFXPLEVVLAY 686
           L   +A+ LHG +  G   L   TS E+LPP  KG ++   +  +  VLAY
Sbjct: 154 LGRESAIFLHGVSMGGATVL--MTSGELLPPQIKGIISDCAYTSVNAVLAY 202


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 646,688,697
Number of Sequences: 1657284
Number of extensions: 12232956
Number of successful extensions: 24408
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 23727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24407
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 58264468239
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)