Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30646
         (699 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    26   0.34 
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    26   0.34 
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   1.8  
DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory pro...    23   3.2  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           22   4.2  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   4.2  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   5.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.3  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   7.3  

>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 25.8 bits (54), Expect = 0.34
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +3

Query: 102 VMAAPPPNYIQITIVSYNIQPAVPIRGP 185
           VM +PP N + +T+  Y   P++   GP
Sbjct: 135 VMMSPPGNVLNLTMPKYEPNPSIIDPGP 162


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 25.8 bits (54), Expect = 0.34
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +3

Query: 102 VMAAPPPNYIQITIVSYNIQPAVPIRGP 185
           VM +PP N + +T+  Y   P++   GP
Sbjct: 135 VMMSPPGNVLNLTMPKYEPNPSIIDPGP 162


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
 Frame = +1

Query: 19  TSDMQG-DGESADAEQKEPAQDGEDQD 96
           T D QG D  SADA + E A   E+ D
Sbjct: 695 TEDAQGGDAPSADAAESEDASRMEEVD 721


>DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory
           protein 7 protein.
          Length = 127

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = -2

Query: 356 CNTKEAESPDSARRACQRDRSRD*TTFSKQ 267
           CN K+ E+ +   R   + R+RD    SK+
Sbjct: 77  CNQKQKETAEKVIRHLTQKRARDWERLSKK 106


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -3

Query: 307 SGTGAEIRQRFLNNS*NAYQS 245
           SG G+    R+ NNS + YQS
Sbjct: 166 SGEGSLQENRYYNNSPDQYQS 186


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = -3

Query: 655  AISISVDKLTNICNITYANLSAAGGMCSSAHPLRA 551
            A+S   D L+   N T   L+ +GG   S+HPL A
Sbjct: 961  ALSSMFDSLSG--NNTGDALAPSGGKKGSSHPLAA 993


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 12/27 (44%), Positives = 13/27 (48%)
 Frame = -2

Query: 101 ETSWSSPSCAGSFCSASADSPSPCMSE 21
           E +WSS   A    SA  D  S C SE
Sbjct: 17  ECNWSSGPNATLQSSACTDDLSSCWSE 43


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = -2

Query: 92  WSSPSCAGSFCSASADSPSPCMSEVHSV 9
           W+ P C  S C   A S  P  +++  V
Sbjct: 756 WNYPVCWQSNCKKGASSDKPNFTKLIQV 783


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = -2

Query: 410 YHNTRK*LKQFKCEYSKCCNTKEAESPDSARRACQR 303
           YH +   L ++KC   KC N K     +  +  C++
Sbjct: 861 YHPSIVSLGEYKCVTCKCENGKPTCWRECDKATCEK 896


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,846
Number of Sequences: 336
Number of extensions: 3069
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)