Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30646
(699 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g78300.1 68414.m09125 14-3-3 protein GF14 omega (GRF2) identi... 34 0.10
At1g35160.1 68414.m04360 14-3-3 protein GF14 phi (GRF4) identica... 33 0.24
At1g08060.2 68414.m00881 MOM1 identical to MOM1 (mutation in a '... 33 0.24
At1g08060.1 68414.m00880 MOM1 identical to MOM1 (mutation in a '... 33 0.24
At4g09000.1 68417.m01487 14-3-3-like protein GF14 chi / general... 32 0.42
At1g26480.1 68414.m03229 14-3-3 protein GF14 iota (GRF12) identi... 32 0.42
At1g22300.2 68414.m02789 14-3-3 protein GF14 epsilon (GRF10) ide... 31 0.73
At1g22300.1 68414.m02788 14-3-3 protein GF14 epsilon (GRF10) ide... 31 0.73
At1g34760.1 68414.m04323 14-3-3 protein GF14 omicron (GRF11) ide... 31 0.97
At5g65430.2 68418.m08229 14-3-3 protein GF14 kappa (GRF8) identi... 30 1.7
At5g65430.1 68418.m08228 14-3-3 protein GF14 kappa (GRF8) identi... 29 3.0
At5g10450.1 68418.m01211 14-3-3 protein GF14 lambda (GRF6) (AFT1... 29 3.0
At5g38480.1 68418.m04651 14-3-3 protein GF14 psi (GRF3) (RCI1) i... 29 3.9
At2g42590.1 68415.m05270 14-3-3 protein GF14 mu (GRF9) identical... 28 5.2
At5g16050.1 68418.m01876 14-3-3 protein GF14 upsilon (GRF5) iden... 28 6.8
At1g22300.3 68414.m02790 14-3-3 protein GF14 epsilon (GRF10) ide... 28 6.8
>At1g78300.1 68414.m09125 14-3-3 protein GF14 omega (GRF2) identical
to GF14omega isoform GI:487791 from [Arabidopsis
thaliana]
Length = 259
Score = 33.9 bits (74), Expect = 0.10
Identities = 16/31 (51%), Positives = 16/31 (51%)
Frame = +1
Query: 1 DNLTLWTSDMQGDGESADAEQKEPAQDGEDQ 93
DNLTLWTSDMQ D E P E Q
Sbjct: 229 DNLTLWTSDMQDDAADEIKEAAAPKPTEEQQ 259
>At1g35160.1 68414.m04360 14-3-3 protein GF14 phi (GRF4) identical
to GF14 protein phi chain GI:1493805, SP:P46077 from
[Arabidopsis thaliana]
Length = 267
Score = 32.7 bits (71), Expect = 0.24
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
Frame = +1
Query: 1 DNLTLWTSDMQGDG--ESADAEQKEPAQDGED 90
DNLTLWTSDMQ + E +A +PA++ ++
Sbjct: 235 DNLTLWTSDMQDESPEEIKEAAAPKPAEEQKE 266
>At1g08060.2 68414.m00881 MOM1 identical to MOM1 (mutation in a
'Morpheus molecule') [Arabidopsis thaliana]
gi|8132770|gb|AAF73381.1|
Length = 2001
Score = 32.7 bits (71), Expect = 0.24
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
Frame = -3
Query: 688 INEYCITLRLIAISISVDKLTNI-CNITYANLSAAGGMCSSAHPLRAQ*ILPQVHNLNLA 512
+ +YC TL + S+S+ L+ I L++ C + + A NL L
Sbjct: 491 LEQYCQTL--FSKSLSLSSLSKIDLGALEETLNSVRKTCDHPYVMDASLKQLLTKNLELH 548
Query: 511 QVTTTDRPGGGALHFILEILCEIKKNKLK 425
++ + G LH + ++L IKKN LK
Sbjct: 549 EILDVEIKASGKLHLLDKMLTHIKKNGLK 577
>At1g08060.1 68414.m00880 MOM1 identical to MOM1 (mutation in a
'Morpheus molecule') [Arabidopsis thaliana]
gi|8132770|gb|AAF73381.1|
Length = 2001
Score = 32.7 bits (71), Expect = 0.24
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
Frame = -3
Query: 688 INEYCITLRLIAISISVDKLTNI-CNITYANLSAAGGMCSSAHPLRAQ*ILPQVHNLNLA 512
+ +YC TL + S+S+ L+ I L++ C + + A NL L
Sbjct: 491 LEQYCQTL--FSKSLSLSSLSKIDLGALEETLNSVRKTCDHPYVMDASLKQLLTKNLELH 548
Query: 511 QVTTTDRPGGGALHFILEILCEIKKNKLK 425
++ + G LH + ++L IKKN LK
Sbjct: 549 EILDVEIKASGKLHLLDKMLTHIKKNGLK 577
>At4g09000.1 68417.m01487 14-3-3-like protein GF14 chi / general
regulatory factor 1 (GRF1) identical to 14-3-3 protein
GF14 chi chain GI:1702986, SP:P42643 from [Arabidopsis
thaliana]
Length = 267
Score = 31.9 bits (69), Expect = 0.42
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = +1
Query: 1 DNLTLWTSDMQGDGESADAEQKEPA 75
DNLTLWTSDMQ D + D ++ PA
Sbjct: 234 DNLTLWTSDMQ-DDVADDIKEAAPA 257
>At1g26480.1 68414.m03229 14-3-3 protein GF14 iota (GRF12) identical
to 14-3-3 protein GF14iota GI:12963453 from [Arabidopsis
thaliana]
Length = 268
Score = 31.9 bits (69), Expect = 0.42
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +1
Query: 1 DNLTLWTSDMQGDGESADAEQKEPAQD 81
DNLTLWTSD+ DG + + +E Q+
Sbjct: 232 DNLTLWTSDLPEDGGEDNIKTEESKQE 258
>At1g22300.2 68414.m02789 14-3-3 protein GF14 epsilon (GRF10)
identical to 14-3-3 protein GF14 epsilon GI:5802798,
SP:P48347 from [Arabidopsis thaliana]
Length = 254
Score = 31.1 bits (67), Expect = 0.73
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 1 DNLTLWTSDMQGDGESADAEQKEPAQD 81
DNLTLWTSD+ +G+ EP +
Sbjct: 227 DNLTLWTSDLNEEGDERTKGADEPQDE 253
>At1g22300.1 68414.m02788 14-3-3 protein GF14 epsilon (GRF10)
identical to 14-3-3 protein GF14 epsilon GI:5802798,
SP:P48347 from [Arabidopsis thaliana]
Length = 254
Score = 31.1 bits (67), Expect = 0.73
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 1 DNLTLWTSDMQGDGESADAEQKEPAQD 81
DNLTLWTSD+ +G+ EP +
Sbjct: 227 DNLTLWTSDLNEEGDERTKGADEPQDE 253
>At1g34760.1 68414.m04323 14-3-3 protein GF14 omicron (GRF11)
identical to SP:Q9S9Z8, 14-3-3-like protein GF14 omicron
(General regulatory factor 11){Arabidopsis thaliana}
Length = 255
Score = 30.7 bits (66), Expect = 0.97
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 1 DNLTLWTSDMQGDGESADAEQKE 69
DNLTLWTSD++ GE + ++
Sbjct: 227 DNLTLWTSDLEEGGEQSKGHNQQ 249
>At5g65430.2 68418.m08229 14-3-3 protein GF14 kappa (GRF8) identical
to 14-3-3 protein GF14 kappa GI:5802794, SP:P48348 from
[Arabidopsis thaliana]
Length = 246
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +1
Query: 1 DNLTLWTSDMQGD 39
DNLTLWTSDMQ D
Sbjct: 232 DNLTLWTSDMQMD 244
>At5g65430.1 68418.m08228 14-3-3 protein GF14 kappa (GRF8) identical
to 14-3-3 protein GF14 kappa GI:5802794, SP:P48348 from
[Arabidopsis thaliana]
Length = 248
Score = 29.1 bits (62), Expect = 3.0
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +1
Query: 1 DNLTLWTSDMQGDGESA 51
DNLTLWTSDMQ + A
Sbjct: 232 DNLTLWTSDMQEQMDEA 248
>At5g10450.1 68418.m01211 14-3-3 protein GF14 lambda (GRF6) (AFT1)
identical to 14-3-3 GF14lambda GI:1345595 from
[Arabidopsis thaliana]
Length = 248
Score = 29.1 bits (62), Expect = 3.0
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +1
Query: 1 DNLTLWTSDMQGDGESA 51
DNLTLWTSDMQ + A
Sbjct: 232 DNLTLWTSDMQEQMDEA 248
>At5g38480.1 68418.m04651 14-3-3 protein GF14 psi (GRF3) (RCI1)
identical to 14-3-3 protein GF14 psi GI:1168200,
SP:P42644
Length = 255
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +1
Query: 1 DNLTLWTSDMQGDGESADAEQKEP 72
DNLTLWTSDM + E +P
Sbjct: 228 DNLTLWTSDMTDEAGDEIKEASKP 251
>At2g42590.1 68415.m05270 14-3-3 protein GF14 mu (GRF9) identical to
GF14 mu GI:3551052, SP:Q96299 from [Arabidopsis
thaliana]
Length = 263
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 3/35 (8%)
Frame = +1
Query: 1 DNLTLWTSDMQ---GDGESADAEQKEPAQDGEDQD 96
DNLTLWTSD+ GD +P G+D +
Sbjct: 229 DNLTLWTSDISEEGGDDAHKTNGSAKPGAGGDDAE 263
>At5g16050.1 68418.m01876 14-3-3 protein GF14 upsilon (GRF5)
identical to 14-3-3 protein GF14 upsilon GI:2232148 from
[Arabidopsis thaliana]
Length = 268
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 1 DNLTLWTSDMQGDGESADAEQKEPAQDGEDQ 93
DNLTLWTSD+ + E + Q ++Q
Sbjct: 231 DNLTLWTSDLNDEAGDDIKEAPKEVQKVDEQ 261
>At1g22300.3 68414.m02790 14-3-3 protein GF14 epsilon (GRF10)
identical to 14-3-3 protein GF14 epsilon GI:5802798,
SP:P48347 from [Arabidopsis thaliana]
Length = 251
Score = 27.9 bits (59), Expect = 6.8
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +1
Query: 1 DNLTLWTSDMQGDG 42
DNLTLWTSD+ +G
Sbjct: 227 DNLTLWTSDLNEEG 240
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,575,129
Number of Sequences: 28952
Number of extensions: 249646
Number of successful extensions: 584
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 579
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 584
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1496852856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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