Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30642
         (631 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40958-5|AAA81764.1|  654|Caenorhabditis elegans Hypothetical pr...    28   4.8  
U28737-8|ABA61869.1|  537|Caenorhabditis elegans Hypothetical pr...    28   4.8  
U28737-7|ABA61870.1|  501|Caenorhabditis elegans Hypothetical pr...    28   4.8  
Z98877-14|CAD56615.1|  338|Caenorhabditis elegans Hypothetical p...    28   6.3  
Z70754-6|CAA94776.1|  242|Caenorhabditis elegans Hypothetical pr...    27   8.4  
AL110487-1|CAB54424.1|  610|Caenorhabditis elegans Hypothetical ...    27   8.4  

>U40958-5|AAA81764.1|  654|Caenorhabditis elegans Hypothetical
           protein F09F9.4 protein.
          Length = 654

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 15/52 (28%), Positives = 28/52 (53%)
 Frame = +2

Query: 458 HALARVCRDDIESDC*HIYLILLRTARARQHTHKTIRALQNTITDTEITVLF 613
           H L ++CR+D+ SD    Y          + + KT+ A+  T+ DT+ +++F
Sbjct: 117 HILPKLCREDL-SDIQLEYRSFQVFPGEEESSWKTVSAVAKTLKDTKTSLIF 167


>U28737-8|ABA61869.1|  537|Caenorhabditis elegans Hypothetical
           protein F14B8.5a protein.
          Length = 537

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -1

Query: 607 HCNFGVSNGIL*CAYSFMRVLPCACSTQQY 518
           +CNF  SN    C +SF+ V+ CA  + QY
Sbjct: 172 NCNFVPSNHQNQCQFSFVLVISCADQSIQY 201


>U28737-7|ABA61870.1|  501|Caenorhabditis elegans Hypothetical
           protein F14B8.5b protein.
          Length = 501

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -1

Query: 607 HCNFGVSNGIL*CAYSFMRVLPCACSTQQY 518
           +CNF  SN    C +SF+ V+ CA  + QY
Sbjct: 136 NCNFVPSNHQNQCQFSFVLVISCADQSIQY 165


>Z98877-14|CAD56615.1|  338|Caenorhabditis elegans Hypothetical
           protein Y69H2.14 protein.
          Length = 338

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 6/38 (15%)
 Frame = -3

Query: 110 DNCKPQSPARRSFSGLPGPLGQ----GE--HADSFSVA 15
           ++C+  +PAR+   G PGP GQ    GE  H+D+ S A
Sbjct: 190 NDCQTCAPARQGAPGPPGPAGQPGQPGEPGHSDTSSTA 227


>Z70754-6|CAA94776.1|  242|Caenorhabditis elegans Hypothetical
           protein F58E6.6 protein.
          Length = 242

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 12/45 (26%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
 Frame = -2

Query: 603 VISVSVMV-FCSARIVLCVCCRARAVRSSIRYICQQSDSISSRQT 472
           ++++++ V F    +VL + CR R VR     +C+ +++ S+  T
Sbjct: 173 ILAIALAVLFILLVVVLWIVCRRRTVRLDSETVCESAENNSNMST 217


>AL110487-1|CAB54424.1|  610|Caenorhabditis elegans Hypothetical
           protein Y39E4B.1 protein.
          Length = 610

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = -1

Query: 136 LLGIPRLWGIIANPNPQHEGVSAGCPGL*ARENM 35
           L G+P ++G++  P+   EG++    G    ENM
Sbjct: 300 LYGVPGVYGVVTLPSGVREGINMFLEGFIRTENM 333


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,468,651
Number of Sequences: 27780
Number of extensions: 299648
Number of successful extensions: 913
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 838
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 911
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1385109898
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)