Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30641
(602 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P50882 Cluster: 60S ribosomal protein L9; n=17; Eukaryo... 154 2e-36
UniRef50_P32969 Cluster: 60S ribosomal protein L9; n=86; Eukaryo... 128 1e-28
UniRef50_P49210 Cluster: 60S ribosomal protein L9; n=55; Eukaryo... 113 4e-24
UniRef50_Q10232 Cluster: 60S ribosomal protein L9-A; n=6; Eukary... 109 7e-23
UniRef50_O02376 Cluster: 60S ribosomal protein L9; n=1; Haemonch... 107 2e-22
UniRef50_Q54XI5 Cluster: 60S ribosomal protein L9; n=1; Dictyost... 103 2e-21
UniRef50_Q4P4X4 Cluster: Putative uncharacterized protein; n=1; ... 101 1e-20
UniRef50_P05738 Cluster: 60S ribosomal protein L9-A; n=40; Eukar... 99 9e-20
UniRef50_Q7QU08 Cluster: GLP_108_35846_36403; n=1; Giardia lambl... 93 6e-18
UniRef50_UPI00004985C5 Cluster: 60S ribosomal protein L9; n=2; E... 87 2e-16
UniRef50_Q9AW64 Cluster: 60S ribosomal protein L9; n=1; Guillard... 87 2e-16
UniRef50_UPI0001554F35 Cluster: PREDICTED: similar to Chain A, S... 85 1e-15
UniRef50_A0DI71 Cluster: Chromosome undetermined scaffold_51, wh... 82 9e-15
UniRef50_UPI0000D9FBAF Cluster: PREDICTED: similar to 60S riboso... 80 5e-14
UniRef50_Q8SSF7 Cluster: 60S RIBOSOMAL PROTEIN L9; n=1; Encephal... 79 1e-13
UniRef50_Q8U015 Cluster: 50S ribosomal protein L6P; n=14; Euryar... 73 7e-12
UniRef50_Q5JJG4 Cluster: 50S ribosomal protein L6P; n=3; Archaea... 69 1e-10
UniRef50_O28370 Cluster: 50S ribosomal protein L6P; n=4; Euryarc... 64 3e-09
UniRef50_UPI0000DA368E Cluster: PREDICTED: similar to 60S riboso... 63 4e-09
UniRef50_A0RVY9 Cluster: Ribosomal protein L6P/L9E; n=1; Cenarch... 63 4e-09
UniRef50_A2GN76 Cluster: Ribosomal protein L6, putative; n=2; Tr... 63 6e-09
UniRef50_A3CT13 Cluster: 50S ribosomal protein L6P; n=2; Methano... 62 7e-09
UniRef50_A1RXT3 Cluster: Ribosomal protein L6; n=2; Thermoprotei... 62 1e-08
UniRef50_UPI000021E22B Cluster: PREDICTED: similar to ribosomal ... 60 4e-08
UniRef50_UPI0000DA3DDB Cluster: PREDICTED: similar to 60S riboso... 59 7e-08
UniRef50_O05637 Cluster: 50S ribosomal protein L6P; n=8; Thermop... 59 7e-08
UniRef50_Q8ZVA7 Cluster: 50S ribosomal protein L6P; n=5; Thermop... 59 7e-08
UniRef50_Q74MR6 Cluster: 50S ribosomal protein L6P; n=1; Nanoarc... 56 6e-07
UniRef50_Q97BW0 Cluster: 50S ribosomal protein L6P; n=1; Thermop... 55 1e-06
UniRef50_P14135 Cluster: 50S ribosomal protein L6P; n=5; Halobac... 54 3e-06
UniRef50_Q3LWE8 Cluster: Ribosomal protein L9; n=1; Bigelowiella... 54 3e-06
UniRef50_A7DSX9 Cluster: Ribosomal protein L6; n=1; Candidatus N... 54 3e-06
UniRef50_Q673R2 Cluster: 50S ribosomal protein L6P; n=2; environ... 53 5e-06
UniRef50_Q6L1B1 Cluster: 50S ribosomal protein L6P; n=3; Thermop... 52 1e-05
UniRef50_Q8TW14 Cluster: 50S ribosomal protein L6P; n=3; cellula... 51 2e-05
UniRef50_Q8PV34 Cluster: 50S ribosomal protein L6P; n=4; Methano... 48 2e-04
UniRef50_A4M9T7 Cluster: 50S ribosomal protein L6; n=3; Thermoto... 46 5e-04
UniRef50_Q5AEN3 Cluster: Putative uncharacterized protein; n=1; ... 46 0.001
UniRef50_Q8ETW8 Cluster: 50S ribosomal protein L6; n=40; Bacteri... 43 0.005
UniRef50_Q48D51 Cluster: 50S ribosomal protein L6; n=6; Proteoba... 43 0.006
UniRef50_Q6E6D2 Cluster: Large subunit ribosomal protein L9e; n=... 42 0.008
UniRef50_A0BWM5 Cluster: Chromosome undetermined scaffold_132, w... 42 0.011
UniRef50_P46898 Cluster: 50S ribosomal protein L6; n=7; Bacilli|... 39 0.10
UniRef50_Q9ZAE4 Cluster: 50S ribosomal protein L6; n=4; cellular... 38 0.14
UniRef50_Q3ZZN4 Cluster: 50S ribosomal protein L6; n=7; Bacteria... 38 0.14
UniRef50_A5GIT1 Cluster: 50S ribosomal protein L6; n=7; Bacteria... 37 0.32
UniRef50_Q7UN05 Cluster: 50S ribosomal protein L6; n=3; Planctom... 36 0.56
UniRef50_Q9RSL3 Cluster: 50S ribosomal protein L6; n=65; cellula... 36 0.56
UniRef50_Q83ER1 Cluster: 50S ribosomal protein L6; n=108; Proteo... 36 0.56
UniRef50_A5LSZ6 Cluster: 50S ribosomal protein L6; n=1; Streptoc... 35 1.7
UniRef50_Q11HR7 Cluster: 50S ribosomal protein L6; n=73; Proteob... 35 1.7
UniRef50_Q4QI55 Cluster: Putative uncharacterized protein; n=3; ... 34 2.3
UniRef50_Q6YR07 Cluster: 50S ribosomal protein L6; n=16; Firmicu... 34 2.3
UniRef50_Q8A491 Cluster: 50S ribosomal protein L6; n=34; Bacteri... 34 2.3
UniRef50_A6S819 Cluster: Citrate synthase; n=1; Botryotinia fuck... 34 3.0
UniRef50_Q0ID19 Cluster: 50S ribosomal protein L6; n=6; Bacteria... 33 3.9
UniRef50_P92943 Cluster: Chloride channel protein CLC-d; n=8; Ma... 33 5.2
UniRef50_Q6KI40 Cluster: 50S ribosomal protein l6; n=4; Mycoplas... 33 6.9
UniRef50_Q8TMD2 Cluster: Putative uncharacterized protein; n=3; ... 33 6.9
UniRef50_Q2JIL3 Cluster: 50S ribosomal protein L6; n=44; cellula... 33 6.9
UniRef50_Q9ZCS0 Cluster: 50S ribosomal protein L6; n=10; Rickett... 33 6.9
UniRef50_Q1E190 Cluster: Putative uncharacterized protein; n=1; ... 32 9.1
UniRef50_Q5FM76 Cluster: 50S ribosomal protein L6; n=10; Firmicu... 32 9.1
>UniRef50_P50882 Cluster: 60S ribosomal protein L9; n=17;
Eukaryota|Rep: 60S ribosomal protein L9 - Drosophila
melanogaster (Fruit fly)
Length = 190
Score = 154 bits (373), Expect = 2e-36
Identities = 72/86 (83%), Positives = 79/86 (91%)
Frame = +2
Query: 254 TKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDEL 433
T GFQYKMRAVYAHFPINCVT+E N++IEIRNFLGEKYIRRV+MAPGVTVVNS QKDEL
Sbjct: 83 TFGFQYKMRAVYAHFPINCVTSENNTVIEIRNFLGEKYIRRVEMAPGVTVVNSTAQKDEL 142
Query: 434 IIEGNSLEDVSSSAALIQQSTTVKNR 511
I+EGN +E VS SAALIQQSTTVKN+
Sbjct: 143 IVEGNDIESVSGSAALIQQSTTVKNK 168
Score = 118 bits (283), Expect = 1e-25
Identities = 55/82 (67%), Positives = 67/82 (81%)
Frame = +3
Query: 9 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFG 188
M+ I +NQ VKIP + VK+R+VT+ G RG LKR+FKHLA+D+ M + R LKVEKWFG
Sbjct: 1 MRTINSNQCVKIPKDIKASVKARVVTITGTRGTLKRSFKHLALDMYMPDKRTLKVEKWFG 60
Query: 189 SKKELAAVRTVCSHVENMIKGV 254
+KKELAAVRTVCSH+ENMIKGV
Sbjct: 61 TKKELAAVRTVCSHIENMIKGV 82
Score = 39.9 bits (89), Expect = 0.045
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +1
Query: 511 DIRKFLDGLYVSEKTTVV 564
DIRKFLDGLYVSEKTTVV
Sbjct: 169 DIRKFLDGLYVSEKTTVV 186
>UniRef50_P32969 Cluster: 60S ribosomal protein L9; n=86;
Eukaryota|Rep: 60S ribosomal protein L9 - Homo sapiens
(Human)
Length = 192
Score = 128 bits (308), Expect = 1e-28
Identities = 61/86 (70%), Positives = 71/86 (82%)
Frame = +2
Query: 254 TKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDEL 433
T GF+YKMR+VYAHFPIN V E S++EIRNFLGEKYIRRV+M PGV S QKDEL
Sbjct: 85 TLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRPGVACSVSQAQKDEL 144
Query: 434 IIEGNSLEDVSSSAALIQQSTTVKNR 511
I+EGN +E VS+SAALIQQ+TTVKN+
Sbjct: 145 ILEGNDIELVSNSAALIQQATTVKNK 170
Score = 100 bits (240), Expect = 2e-20
Identities = 44/84 (52%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = +3
Query: 9 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRL--LKVEKW 182
MK I++NQ V IP+ + + +K R V VKGPRG L+R+F H+ V++ ++ + L+V+KW
Sbjct: 1 MKTILSNQTVDIPENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKKKKRLRVDKW 60
Query: 183 FGSKKELAAVRTVCSHVENMIKGV 254
+G++KELA VRT+CSHV+NMIKGV
Sbjct: 61 WGNRKELATVRTICSHVQNMIKGV 84
Score = 34.7 bits (76), Expect = 1.7
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +1
Query: 511 DIRKFLDGLYVSEKTTV 561
DIRKFLDG+YVSEK TV
Sbjct: 171 DIRKFLDGIYVSEKGTV 187
>UniRef50_P49210 Cluster: 60S ribosomal protein L9; n=55;
Eukaryota|Rep: 60S ribosomal protein L9 - Oryza sativa
subsp. japonica (Rice)
Length = 190
Score = 113 bits (271), Expect = 4e-24
Identities = 53/86 (61%), Positives = 65/86 (75%)
Frame = +2
Query: 254 TKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDEL 433
TKG++YKMR VYAHFPIN T N+ IEIRNFLGEK +R+V M GVT++ S K KDEL
Sbjct: 84 TKGYRYKMRFVYAHFPINASITNSNTAIEIRNFLGEKKVRKVDMLEGVTILRSEKVKDEL 143
Query: 434 IIEGNSLEDVSSSAALIQQSTTVKNR 511
+++GN +E VS SAALI Q VKN+
Sbjct: 144 VLDGNDIELVSRSAALINQKCHVKNK 169
Score = 97.5 bits (232), Expect = 2e-19
Identities = 43/85 (50%), Positives = 67/85 (78%), Gaps = 1/85 (1%)
Frame = +3
Query: 9 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMV-NPRLLKVEKWF 185
MK I+A++ ++IP+G+TV V +++VTV+GPRG L RNFKHL +D +++ R L+V+ WF
Sbjct: 1 MKTILASETMEIPEGVTVQVAAKVVTVEGPRGKLTRNFKHLNLDFQLLEGGRKLQVDAWF 60
Query: 186 GSKKELAAVRTVCSHVENMIKGVLK 260
G+++ +AA+RT SHV+N+I GV K
Sbjct: 61 GTRRTMAAIRTAISHVQNLITGVTK 85
Score = 34.3 bits (75), Expect = 2.3
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +1
Query: 511 DIRKFLDGLYVSEKTTVVLD 570
DIRKFLDG+YVS+K T+ D
Sbjct: 170 DIRKFLDGIYVSDKGTITED 189
>UniRef50_Q10232 Cluster: 60S ribosomal protein L9-A; n=6;
Eukaryota|Rep: 60S ribosomal protein L9-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 190
Score = 109 bits (261), Expect = 7e-23
Identities = 52/86 (60%), Positives = 65/86 (75%)
Frame = +2
Query: 254 TKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDEL 433
T+GF+YKMR VYAHFPIN TE +++EIRNFLGE+ R +K PGVTV S KDE+
Sbjct: 83 TQGFRYKMRLVYAHFPININLTENGTVVEIRNFLGERITRVIKCLPGVTVSISSAVKDEI 142
Query: 434 IIEGNSLEDVSSSAALIQQSTTVKNR 511
I+EGNSLE+VS SAA I+Q V+N+
Sbjct: 143 ILEGNSLENVSQSAANIKQICNVRNK 168
Score = 70.9 bits (166), Expect = 2e-11
Identities = 35/101 (34%), Positives = 59/101 (58%)
Frame = +3
Query: 12 KQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGS 191
+ I ++ + IP G+TV +K+R VTV GPRG LK+N +H+ ++++ +K W GS
Sbjct: 3 RDIYKDETLTIPKGVTVDIKARNVTVTGPRGTLKQNLRHVDIEMKK-QGNTIKFIVWHGS 61
Query: 192 KKELAAVRTVCSHVENMIKGVLKASNTRCVLCMLTSPLTVS 314
+K A +R+V S + NMI GV + + L P+ ++
Sbjct: 62 RKHNACIRSVYSIINNMIIGVTQGFRYKMRLVYAHFPININ 102
>UniRef50_O02376 Cluster: 60S ribosomal protein L9; n=1; Haemonchus
contortus|Rep: 60S ribosomal protein L9 - Haemonchus
contortus (Barber pole worm)
Length = 141
Score = 107 bits (257), Expect = 2e-22
Identities = 47/84 (55%), Positives = 63/84 (75%)
Frame = +3
Query: 9 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFG 188
MK + +N V PDG+T VK+R+V V GPRG LKR+F+HL +++ V L+V KWFG
Sbjct: 1 MKLVESNDTVDFPDGVTFTVKNRVVHVTGPRGTLKRDFRHLHMEMERVGKNQLRVRKWFG 60
Query: 189 SKKELAAVRTVCSHVENMIKGVLK 260
+KE+AA+RTVCSH++NMIKGV K
Sbjct: 61 VRKEIAAIRTVCSHIQNMIKGVTK 84
Score = 66.1 bits (154), Expect = 6e-10
Identities = 28/44 (63%), Positives = 34/44 (77%)
Frame = +2
Query: 254 TKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKM 385
TKGF+YKMR+VYAHFPIN +G +EIRNFLGEK +R V +
Sbjct: 83 TKGFRYKMRSVYAHFPINVTLQDGGRTVEIRNFLGEKIVRPVPL 126
>UniRef50_Q54XI5 Cluster: 60S ribosomal protein L9; n=1;
Dictyostelium discoideum AX4|Rep: 60S ribosomal protein
L9 - Dictyostelium discoideum AX4
Length = 206
Score = 103 bits (248), Expect = 2e-21
Identities = 44/84 (52%), Positives = 61/84 (72%)
Frame = +2
Query: 254 TKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDEL 433
TKG++YKMR VYAHFPIN T+G ++EIRNF GEK +RR+++ G+T + K KDE+
Sbjct: 101 TKGYEYKMRFVYAHFPINVAVTDGGRVVEIRNFFGEKIVRRIELLDGITCYRNEKAKDEI 160
Query: 434 IIEGNSLEDVSSSAALIQQSTTVK 505
++ GNSLE +S S A IQ + +K
Sbjct: 161 VLTGNSLELLSQSCATIQLRSAIK 184
Score = 78.6 bits (185), Expect = 1e-13
Identities = 36/87 (41%), Positives = 54/87 (62%)
Frame = +3
Query: 54 LTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHV 233
+TV VK R V V GPRG L ++F H +VDI +V + L V+ WFG++K++A ++T+ S +
Sbjct: 34 VTVDVKGRSVKVTGPRGTLSKSFDHASVDINLVGKKELTVDLWFGNRKQIACIKTITSII 93
Query: 234 ENMIKGVLKASNTRCVLCMLTSPLTVS 314
ENMI GV K + P+ V+
Sbjct: 94 ENMITGVTKGYEYKMRFVYAHFPINVA 120
>UniRef50_Q4P4X4 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 252
Score = 101 bits (242), Expect = 1e-20
Identities = 46/86 (53%), Positives = 60/86 (69%)
Frame = +2
Query: 254 TKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDEL 433
T GFQYKMRAVYAHFPIN + EIRNFLGEK +R + M GVT+ QKD++
Sbjct: 145 TVGFQYKMRAVYAHFPINIIIAGDKKSAEIRNFLGEKRVRNIAMLEGVTIQEDKAQKDQV 204
Query: 434 IIEGNSLEDVSSSAALIQQSTTVKNR 511
++EGN ++ VS SAAL+ +T V+N+
Sbjct: 205 LVEGNDIDLVSQSAALLHGATLVRNK 230
Score = 35.1 bits (77), Expect = 1.3
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Frame = +3
Query: 105 VLKRNFKHLAVDIRMVNP---RLLKVEKWFGSKKELAAVRTVCSHVENMIKGV 254
V +++ KH+ +D R++ + +K W +K A +RT + V NMIKGV
Sbjct: 92 VSQQSLKHMNLDARIIKSPAGQKIKFVVWHAGRKHAACLRTAQACVANMIKGV 144
Score = 33.9 bits (74), Expect = 3.0
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +3
Query: 9 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRN 119
M QI + +P ++V V SR+ TVKGPRG L ++
Sbjct: 1 MLQIFKELDLAVPADVSVSVSSRVFTVKGPRGSLTKS 37
>UniRef50_P05738 Cluster: 60S ribosomal protein L9-A; n=40;
Eukaryota|Rep: 60S ribosomal protein L9-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 191
Score = 98.7 bits (235), Expect = 9e-20
Identities = 48/88 (54%), Positives = 63/88 (71%), Gaps = 2/88 (2%)
Frame = +2
Query: 254 TKGFQYKMRAVYAHFPINC--VTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKD 427
TKG++YKMR VYAHFPIN V +G IE+RNFLG+K IR V + GVT+ S KD
Sbjct: 83 TKGYKYKMRYVYAHFPINVNIVEKDGAKFIEVRNFLGDKKIRNVPVRDGVTIEFSTNVKD 142
Query: 428 ELIIEGNSLEDVSSSAALIQQSTTVKNR 511
E+++ GNS+EDVS +AA +QQ V+N+
Sbjct: 143 EIVLSGNSVEDVSQNAADLQQICRVRNK 170
Score = 87.0 bits (206), Expect = 3e-16
Identities = 42/84 (50%), Positives = 58/84 (69%)
Frame = +3
Query: 9 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFG 188
MK I Q++++P+G+TV +KSR+V V GPRG L +N KH+ V VN +L+KV G
Sbjct: 1 MKYIQTEQQIEVPEGVTVSIKSRIVKVVGPRGTLTKNLKHIDVTFTKVNNQLIKVAVHNG 60
Query: 189 SKKELAAVRTVCSHVENMIKGVLK 260
+K +AA+RTV S V+NMI GV K
Sbjct: 61 GRKHVAALRTVKSLVDNMITGVTK 84
>UniRef50_Q7QU08 Cluster: GLP_108_35846_36403; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_108_35846_36403 - Giardia lamblia
ATCC 50803
Length = 185
Score = 92.7 bits (220), Expect = 6e-18
Identities = 44/86 (51%), Positives = 56/86 (65%)
Frame = +2
Query: 254 TKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDEL 433
T GF+YKMR YAHFPI + N IEIRNF+ + RR++ PGVT+ S KDEL
Sbjct: 81 TYGFEYKMRLAYAHFPIAATVVDNNKAIEIRNFMHQIKTRRIECLPGVTIAMSTNVKDEL 140
Query: 434 IIEGNSLEDVSSSAALIQQSTTVKNR 511
I+ G S+EDVS +AA I +S V N+
Sbjct: 141 ILRGISIEDVSHTAARIHESLKVPNK 166
Score = 69.3 bits (162), Expect = 6e-11
Identities = 32/79 (40%), Positives = 46/79 (58%)
Frame = +3
Query: 18 IVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKK 197
+ ++ +K+P + + R+VTVKG +G L R+F H +DI N + V WF K
Sbjct: 3 LCSSMTIKVPTDVECTINKRVVTVKGKKGTLVRDFSHAPLDITHAND-TISVAVWFPRGK 61
Query: 198 ELAAVRTVCSHVENMIKGV 254
A RT+CSH+ENM KGV
Sbjct: 62 RNALPRTICSHIENMFKGV 80
>UniRef50_UPI00004985C5 Cluster: 60S ribosomal protein L9; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L9 - Entamoeba histolytica HM-1:IMSS
Length = 197
Score = 87.4 bits (207), Expect = 2e-16
Identities = 42/86 (48%), Positives = 56/86 (65%)
Frame = +2
Query: 254 TKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDEL 433
TKG+QYKMR VYAHFP+ V + I+++NFLGEK R ++M GV V KDE+
Sbjct: 93 TKGYQYKMRVVYAHFPVTLVIADDGKSIQVQNFLGEKRTRHIEMYDGVVV--KKLGKDEI 150
Query: 434 IIEGNSLEDVSSSAALIQQSTTVKNR 511
+EGN +E VS SAA I + V+N+
Sbjct: 151 CLEGNDVEKVSQSAANIHAANLVRNK 176
Score = 66.5 bits (155), Expect = 5e-10
Identities = 33/103 (32%), Positives = 59/103 (57%), Gaps = 9/103 (8%)
Frame = +3
Query: 30 QKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDI-------RMVNPR--LLKVEKW 182
+ V IP+G+ + + + + V GPRG L R F+H VDI + P+ ++ ++ W
Sbjct: 9 EHVVIPEGVNIEINRKNIKVTGPRGSLTREFQHPKVDIYASKLVVKKEGPKENVVVIDMW 68
Query: 183 FGSKKELAAVRTVCSHVENMIKGVLKASNTRCVLCMLTSPLTV 311
+G++++ A VRT+ SH++NMI GV K + + P+T+
Sbjct: 69 YGNRRDSAVVRTIASHIKNMITGVTKGYQYKMRVVYAHFPVTL 111
>UniRef50_Q9AW64 Cluster: 60S ribosomal protein L9; n=1; Guillardia
theta|Rep: 60S ribosomal protein L9 - Guillardia theta
(Cryptomonas phi)
Length = 188
Score = 87.4 bits (207), Expect = 2e-16
Identities = 41/84 (48%), Positives = 57/84 (67%)
Frame = +2
Query: 260 GFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELII 439
GF+Y ++ +YAHFPIN T+ S +EIRNFLGEK IR++ M GV + + +KDE+ +
Sbjct: 86 GFEYILQPIYAHFPINLSITDDGSCLEIRNFLGEKRIRKIYMGQGVKIKKNEAKKDEISV 145
Query: 440 EGNSLEDVSSSAALIQQSTTVKNR 511
G+ L VS +AA IQQS KN+
Sbjct: 146 FGSDLNLVSLNAASIQQSCQAKNK 169
Score = 54.0 bits (124), Expect = 3e-06
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +3
Query: 9 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRL-LKVEKWF 185
M I +K+KIP + + K+R ++ G G + R+F+ + IR + + + W
Sbjct: 1 MLTIKTIRKIKIPKNVKIKTKARKISATGSLGSIIRSFEKTQISIRYFEKKKEIILLLWM 60
Query: 186 GSKKELAAVRTVCSHVENMIKGV 254
KK+LA + T+ SH+ NMI GV
Sbjct: 61 AGKKQLAKLNTIASHITNMIVGV 83
>UniRef50_UPI0001554F35 Cluster: PREDICTED: similar to Chain A,
Solution Structure Of The N-Terminal Domain Of Human
Ribosomal Protein L9; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to Chain A, Solution Structure Of The
N-Terminal Domain Of Human Ribosomal Protein L9 -
Ornithorhynchus anatinus
Length = 143
Score = 85.0 bits (201), Expect = 1e-15
Identities = 48/110 (43%), Positives = 70/110 (63%), Gaps = 3/110 (2%)
Frame = +3
Query: 9 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLK--VEKW 182
MK I++NQ V IP + + +K R V VKGP+G L R+F H+ V++ ++ +L K V+KW
Sbjct: 1 MKTILSNQTVDIPANIGIILKGRTVIVKGPQGSLHRDFNHINVELSLLGKKLKKFHVDKW 60
Query: 183 FGSKKELAAVRTVCSHVENMIKGVLKASNTRCVLCMLTSPLTVSPL-RVI 329
+G++KELA V T+CS V+N IK V T V + TV+PL RV+
Sbjct: 61 WGNRKELATVHTICSPVQNTIKWV--TLGTSRVKESVGKEKTVTPLDRVV 108
>UniRef50_A0DI71 Cluster: Chromosome undetermined scaffold_51, whole
genome shotgun sequence; n=6; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_51, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 196
Score = 82.2 bits (194), Expect = 9e-15
Identities = 40/87 (45%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
Frame = +2
Query: 254 TKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVV-NSPKQKDE 430
T G+++KM YAHFPI +EI+NFLGEK IR +K PGVT+ N ++K+
Sbjct: 92 TTGYKFKMVLAYAHFPIIINLIGNGQGVEIKNFLGEKIIRTIKCLPGVTITRNEAEEKNV 151
Query: 431 LIIEGNSLEDVSSSAALIQQSTTVKNR 511
L ++GN L +VS + ALI Q+ VKN+
Sbjct: 152 LTLQGNDLNNVSLTCALIHQACAVKNK 178
Score = 67.7 bits (158), Expect = 2e-10
Identities = 38/111 (34%), Positives = 61/111 (54%), Gaps = 9/111 (8%)
Frame = +3
Query: 9 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRM---VNPR------ 161
MK I+ + V IP+ + + KS++V VKGPRG L +NF+H A+DI++ VN +
Sbjct: 1 MKYILTEEHVPIPEKIEITQKSKVVKVKGPRGELTKNFRHSALDIQVQKKVNKKNNVAKS 60
Query: 162 LLKVEKWFGSKKELAAVRTVCSHVENMIKGVLKASNTRCVLCMLTSPLTVS 314
+ V W +K+ V +V S + NMI+GV + VL P+ ++
Sbjct: 61 RVSVRMWQSYRKQRCQVNSVASQIRNMIRGVTTGYKFKMVLAYAHFPIIIN 111
>UniRef50_UPI0000D9FBAF Cluster: PREDICTED: similar to 60S ribosomal
protein L9, partial; n=1; Macaca mulatta|Rep: PREDICTED:
similar to 60S ribosomal protein L9, partial - Macaca
mulatta
Length = 179
Score = 79.8 bits (188), Expect = 5e-14
Identities = 43/86 (50%), Positives = 56/86 (65%), Gaps = 4/86 (4%)
Frame = +3
Query: 9 MKQIVANQKVKIP-DGLTVHV--KSRLVTVKGPRGVLKRNFKHLAVDIRMVNP-RLLKVE 176
MK I + ++IP DG TV V KSR + V G G L+R F+H+ VD+++V R + VE
Sbjct: 60 MKTIHSQIDIQIPEDGSTVKVTLKSRHIVVSGKYGKLERTFRHIPVDMKLVEDGRKITVE 119
Query: 177 KWFGSKKELAAVRTVCSHVENMIKGV 254
WFG K A +RTVCSH+ENMI GV
Sbjct: 120 MWFGLTKNKACIRTVCSHIENMITGV 145
Score = 47.2 bits (107), Expect = 3e-04
Identities = 21/31 (67%), Positives = 23/31 (74%)
Frame = +2
Query: 263 FQYKMRAVYAHFPINCVTTEGNSIIEIRNFL 355
+QYK+R VYAHFPIN T S IEIRNFL
Sbjct: 149 YQYKLRFVYAHFPINSNITNDGSTIEIRNFL 179
>UniRef50_Q8SSF7 Cluster: 60S RIBOSOMAL PROTEIN L9; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L9 -
Encephalitozoon cuniculi
Length = 204
Score = 78.6 bits (185), Expect = 1e-13
Identities = 41/88 (46%), Positives = 52/88 (59%)
Frame = +2
Query: 254 TKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDEL 433
T GF Y M+AVY HF IN E I+ ++NFLGEK ++R +M G V ++KD +
Sbjct: 102 TVGFAYTMKAVYNHFSINMEIKEDGKILLVKNFLGEKNVKRFRMR-GAARVRLDERKDTI 160
Query: 434 IIEGNSLEDVSSSAALIQQSTTVKNRIS 517
+IEG SL DVS SA I KNR S
Sbjct: 161 VIEGPSLSDVSQSAGTITNECKAKNRDS 188
Score = 41.1 bits (92), Expect = 0.020
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Frame = +3
Query: 9 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRG-VLKRNFKH-LAVDIRMVNPRLLKVEKW 182
+ +I+ + VK+P+ T + ++ T +GP+G +++ +H L DI N +++ W
Sbjct: 21 LMRILVTRIVKVPEDCTATQEGKIFTFQGPKGSIVEDCTRHPLTFDIHEGN---IRIRLW 77
Query: 183 FGSKKELAAVRTVCSHVENMIKGV 254
G +K +A TV S + N IK V
Sbjct: 78 NGKRKAMALAITVESLLRNAIKAV 101
>UniRef50_Q8U015 Cluster: 50S ribosomal protein L6P; n=14;
Euryarchaeota|Rep: 50S ribosomal protein L6P -
Pyrococcus furiosus
Length = 184
Score = 72.5 bits (170), Expect = 7e-12
Identities = 39/83 (46%), Positives = 56/83 (67%)
Frame = +2
Query: 254 TKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDEL 433
T+GF YK++ VY+HFPI+ V +G+ +I I NFLGEK R+ K+ PGVTV + E+
Sbjct: 83 TEGFTYKLKVVYSHFPIS-VKVQGDEVI-IENFLGEKAPRKAKILPGVTV---KVRGQEI 137
Query: 434 IIEGNSLEDVSSSAALIQQSTTV 502
I+EG E V +AA I+Q+T +
Sbjct: 138 IVEGIDKEAVGQTAANIEQATRI 160
Score = 56.8 bits (131), Expect = 4e-07
Identities = 31/94 (32%), Positives = 54/94 (57%)
Frame = +3
Query: 30 QKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAA 209
++V+IP+G+ V V+ V VKGP+G L+R F + I + ++ + K F +K++A
Sbjct: 9 EEVEIPEGVEVTVEGYKVKVKGPKGELEREFFWPGIQIFTEDGNVV-IYKDFPRRKDVAI 67
Query: 210 VRTVCSHVENMIKGVLKASNTRCVLCMLTSPLTV 311
RT +H+ NMIKGV + + + P++V
Sbjct: 68 ARTFAAHIRNMIKGVTEGFTYKLKVVYSHFPISV 101
>UniRef50_Q5JJG4 Cluster: 50S ribosomal protein L6P; n=3;
Archaea|Rep: 50S ribosomal protein L6P - Pyrococcus
kodakaraensis (Thermococcus kodakaraensis)
Length = 184
Score = 68.5 bits (160), Expect = 1e-10
Identities = 36/83 (43%), Positives = 55/83 (66%)
Frame = +2
Query: 254 TKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDEL 433
T+GF+Y+++ VY+HFP+ V +G+ ++ I NFLGEK RR K+ PGVTV + E+
Sbjct: 83 TEGFKYRLKVVYSHFPMT-VKVQGDEVV-IENFLGEKNPRRAKILPGVTV---KVKGSEI 137
Query: 434 IIEGNSLEDVSSSAALIQQSTTV 502
+EG E V +AA I+Q+T +
Sbjct: 138 EVEGIDKEAVGQTAANIEQATRI 160
Score = 66.1 bits (154), Expect = 6e-10
Identities = 35/94 (37%), Positives = 57/94 (60%)
Frame = +3
Query: 30 QKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAA 209
++++IP+G+ V V+ V VKGP+G L+R K+ V I + +++ + K F KK++A
Sbjct: 9 EEIEIPEGVEVTVEGNTVKVKGPKGELQRELKYPGVQIFTEDGKVV-IYKEFPRKKDVAI 67
Query: 210 VRTVCSHVENMIKGVLKASNTRCVLCMLTSPLTV 311
VRT +H+ NMIKGV + R + P+TV
Sbjct: 68 VRTFKAHINNMIKGVTEGFKYRLKVVYSHFPMTV 101
>UniRef50_O28370 Cluster: 50S ribosomal protein L6P; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L6P -
Archaeoglobus fulgidus
Length = 196
Score = 63.7 bits (148), Expect = 3e-09
Identities = 33/85 (38%), Positives = 53/85 (62%)
Frame = +2
Query: 257 KGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELI 436
+GF+Y ++ VYAHFPI V EGN +I I NF+GEK+ RR K+ V S + ++
Sbjct: 102 EGFEYHLKVVYAHFPIK-VRVEGNEVI-IENFIGEKHPRRAKIVGRAQVEISGQ---DIY 156
Query: 437 IEGNSLEDVSSSAALIQQSTTVKNR 511
+ G +E+ +AA ++Q+T +K +
Sbjct: 157 VRGIDIEECGQTAANLEQATKIKRK 181
Score = 33.1 bits (72), Expect = 5.2
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Frame = +3
Query: 15 QIVANQKVKIPDGLTVHVKS---RLVTVK--GPRGVLKRNFKHLAVDIRMVNPRLLKVEK 179
++ + V++P+ + + ++ R T+K GP+G R K+ V I + + ++ +V
Sbjct: 17 EVYEERVVEVPEDVQLTIEGDSFRGYTLKAVGPKGENTRYLKYRGVFIEVGDGKV-RVYT 75
Query: 180 WFGSKKELAAVRTVCSHVENMIKGV 254
KK A V T H+EN+I GV
Sbjct: 76 TSPKKKHKAMVGTFAGHIENLITGV 100
>UniRef50_UPI0000DA368E Cluster: PREDICTED: similar to 60S ribosomal
protein L9; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 60S ribosomal protein L9 - Rattus norvegicus
Length = 92
Score = 63.3 bits (147), Expect = 4e-09
Identities = 32/75 (42%), Positives = 46/75 (61%)
Frame = +2
Query: 212 EDSLFTCREHD*RSTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAP 391
++ L +C EHD GF Y+MR+VYA FP N + E S+IE + +G+KYI RV++
Sbjct: 20 QNHLQSCSEHD---QGGFHYRMRSVYAGFPTNVIIQENGSVIEHWSAMGKKYIHRVQIRT 76
Query: 392 GVTVVNSPKQKDELI 436
V S QK+EL+
Sbjct: 77 SVAFYASQAQKNELM 91
>UniRef50_A0RVY9 Cluster: Ribosomal protein L6P/L9E; n=1;
Cenarchaeum symbiosum|Rep: Ribosomal protein L6P/L9E -
Cenarchaeum symbiosum
Length = 165
Score = 63.3 bits (147), Expect = 4e-09
Identities = 33/84 (39%), Positives = 54/84 (64%)
Frame = +2
Query: 260 GFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELII 439
G+ K++ VYAHFPI + +G I+ + NF GE+ R+ K+ G VV+ + +++I+
Sbjct: 69 GYTIKLKVVYAHFPIT-IKQDGAMIL-VENFQGERSARKAKIVGGTKVVS---KGEDVIV 123
Query: 440 EGNSLEDVSSSAALIQQSTTVKNR 511
G+ L DVS +AA ++Q T VKN+
Sbjct: 124 TGHVLTDVSQTAANLEQGTKVKNK 147
>UniRef50_A2GN76 Cluster: Ribosomal protein L6, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein L6,
putative - Trichomonas vaginalis G3
Length = 197
Score = 62.9 bits (146), Expect = 6e-09
Identities = 34/87 (39%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Frame = +2
Query: 254 TKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTV-VNSPKQKDE 430
T G++YKM VY+HFPI +E + F+G K + V GV + N KDE
Sbjct: 91 TLGWRYKMHFVYSHFPIKHTCSEDGRTFDFNGFMGHKEHKIVTAPEGVRIWSNESVAKDE 150
Query: 431 LIIEGNSLEDVSSSAALIQQSTTVKNR 511
+ IEG +LEDVS I Q T +K++
Sbjct: 151 INIEGANLEDVSLVCGQIHQLTKIKDK 177
Score = 42.3 bits (95), Expect = 0.008
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Frame = +3
Query: 12 KQIVANQKVKIPDGLTVHVKSRLVTVK--GPR----GVLKRNFKHLAVDIRM-VNPRLLK 170
+ ++ + KIP+ + VKS +VT++ P+ L ++ HL +D N +
Sbjct: 3 RPVLHQEHFKIPENIKCTVKSGVVTIEHQDPKDKKTSKLVKDLSHLKLDFEYDENDHQIV 62
Query: 171 VEKWFGSKKELAAVRTVCSHVENMIKGV 254
WFG++K LA + T+ V+NMI GV
Sbjct: 63 ARCWFGNRKLLARIGTLFGIVKNMITGV 90
>UniRef50_A3CT13 Cluster: 50S ribosomal protein L6P; n=2;
Methanomicrobiales|Rep: 50S ribosomal protein L6P -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 174
Score = 62.5 bits (145), Expect = 7e-09
Identities = 36/84 (42%), Positives = 51/84 (60%)
Frame = +2
Query: 260 GFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELII 439
G++Y+M+ VY+HFPI + +GN +EI NFLGEK R K+ GVTV DE+ I
Sbjct: 81 GYEYRMKVVYSHFPIQ-LKQQGNR-LEITNFLGEKQPRIAKIIEGVTVKIG---NDEVTI 135
Query: 440 EGNSLEDVSSSAALIQQSTTVKNR 511
G E V ++AA I+ +T + R
Sbjct: 136 TGIDKEKVGNTAANIEHATRITKR 159
Score = 46.4 bits (105), Expect = 5e-04
Identities = 26/75 (34%), Positives = 44/75 (58%)
Frame = +3
Query: 30 QKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAA 209
++V+IP G+ V + ++TV GP+G L R+ + +D+ MV + V K+ LA
Sbjct: 5 RQVEIPPGVDVTLDGGVLTVSGPKGTLVRDMRFPQIDL-MVEGGEVVVSTASEKKRILAM 63
Query: 210 VRTVCSHVENMIKGV 254
T+ +H +NMI+GV
Sbjct: 64 TGTLEAHAKNMIRGV 78
>UniRef50_A1RXT3 Cluster: Ribosomal protein L6; n=2;
Thermoprotei|Rep: Ribosomal protein L6 - Thermofilum
pendens (strain Hrk 5)
Length = 191
Score = 62.1 bits (144), Expect = 1e-08
Identities = 35/86 (40%), Positives = 56/86 (65%)
Frame = +2
Query: 254 TKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDEL 433
TKG++YK++ VYAHFP++ + E + II I NFLGE+ R + PG V +KD++
Sbjct: 83 TKGYRYKLKIVYAHFPMS-LKVEKDKII-IENFLGERGKRIAGIMPGAKV---KIEKDDV 137
Query: 434 IIEGNSLEDVSSSAALIQQSTTVKNR 511
I+EG L+ V+ +AA I +T ++ +
Sbjct: 138 IVEGIDLDAVAQTAANIHLATHLRGK 163
Score = 59.3 bits (137), Expect = 7e-08
Identities = 33/102 (32%), Positives = 56/102 (54%), Gaps = 1/102 (0%)
Frame = +3
Query: 9 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHL-AVDIRMVNPRLLKVEKWF 185
M+ + + V IP+G+ VHV + V V+GP G ++++F H + IR V + VE +
Sbjct: 1 MRVLQKTESVPIPEGVKVHVNGKRVEVEGPLGKVEKDFSHARRISIR-VEGNSVVVETFH 59
Query: 186 GSKKELAAVRTVCSHVENMIKGVLKASNTRCVLCMLTSPLTV 311
+KK+ A V T+ S + NMI GV K + + P+++
Sbjct: 60 ATKKDYALVGTIASIINNMIIGVTKGYRYKLKIVYAHFPMSL 101
>UniRef50_UPI000021E22B Cluster: PREDICTED: similar to ribosomal
protein L9; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L9 - Rattus norvegicus
Length = 77
Score = 60.1 bits (139), Expect = 4e-08
Identities = 35/84 (41%), Positives = 52/84 (61%), Gaps = 2/84 (2%)
Frame = +3
Query: 9 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRL--LKVEKW 182
M+ I NQ VKIP+ + +V VK RG L+R+F H+ +++R++ R L+V+KW
Sbjct: 1 MRIIHINQAVKIPEN------AHIVIVKDTRGTLQRDFNHINIELRLLAKRKKQLQVDKW 54
Query: 183 FGSKKELAAVRTVCSHVENMIKGV 254
+ K LA T+ SHV+NMIK V
Sbjct: 55 LKTMK-LATAHTIYSHVQNMIKRV 77
>UniRef50_UPI0000DA3DDB Cluster: PREDICTED: similar to 60S ribosomal
protein L9; n=3; Euarchontoglires|Rep: PREDICTED:
similar to 60S ribosomal protein L9 - Rattus norvegicus
Length = 145
Score = 59.3 bits (137), Expect = 7e-08
Identities = 38/84 (45%), Positives = 49/84 (58%)
Frame = +2
Query: 260 GFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELII 439
GF+YK+R+VYAHFP+N V +M GV S QKDELI+
Sbjct: 52 GFRYKVRSVYAHFPLNVV----------------------QMRTGVACSVSQAQKDELIL 89
Query: 440 EGNSLEDVSSSAALIQQSTTVKNR 511
EGN E VS+SAALIQ++T V+N+
Sbjct: 90 EGNDTELVSNSAALIQKATAVENQ 113
Score = 41.1 bits (92), Expect = 0.020
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = +3
Query: 195 KELAAVRTVCSHVENMIKGV 254
KELA VRT+CSHV+NMIKGV
Sbjct: 30 KELATVRTICSHVQNMIKGV 49
Score = 32.3 bits (70), Expect = 9.1
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = +1
Query: 511 DIRKFLDGLYVSEKTTV 561
DIRKF+DG+YVSEK T+
Sbjct: 114 DIRKFVDGIYVSEKGTM 130
>UniRef50_O05637 Cluster: 50S ribosomal protein L6P; n=8;
Thermoprotei|Rep: 50S ribosomal protein L6P - Sulfolobus
acidocaldarius
Length = 189
Score = 59.3 bits (137), Expect = 7e-08
Identities = 28/81 (34%), Positives = 53/81 (65%)
Frame = +2
Query: 260 GFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELII 439
G++Y ++ + HFPI+ V G+ + ++ N +GEK IRR K+ PGV V + +++++
Sbjct: 88 GYRYYLKVISTHFPIS-VKVSGDEV-QVSNLIGEKNIRRAKILPGVKVT---VKGEDIVV 142
Query: 440 EGNSLEDVSSSAALIQQSTTV 502
EG+ + +V+ +AA I+ ST +
Sbjct: 143 EGSDIYNVAQTAANIESSTKI 163
Score = 48.8 bits (111), Expect = 1e-04
Identities = 23/84 (27%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Frame = +3
Query: 9 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRM-VNPRLLKVEKWF 185
+K ++++IPD + V +++ ++ VKGP+G + ++F + A IR+ +N + +E F
Sbjct: 4 LKAAYIREEIQIPDKVKVSLENNVLKVKGPKGEVIKDFSY-AKGIRIQLNEGKIILETTF 62
Query: 186 GSKKELAAVRTVCSHVENMIKGVL 257
+++ A + ++ +H++NMI G +
Sbjct: 63 ADRRKKALLYSIIAHIKNMITGTI 86
>UniRef50_Q8ZVA7 Cluster: 50S ribosomal protein L6P; n=5;
Thermoproteaceae|Rep: 50S ribosomal protein L6P -
Pyrobaculum aerophilum
Length = 196
Score = 59.3 bits (137), Expect = 7e-08
Identities = 32/81 (39%), Positives = 51/81 (62%)
Frame = +2
Query: 254 TKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDEL 433
T+G++YK++ +Y HFP+ V +GN ++ I NFLG K + + GV V K K+++
Sbjct: 87 TRGWRYKLKVIYTHFPM-LVKVQGNQLV-IENFLGRKSKITLNIPKGVKV--EVKGKEDI 142
Query: 434 IIEGNSLEDVSSSAALIQQST 496
+IEG E VS+ AA +Q +T
Sbjct: 143 VIEGIDRELVSTFAAAVQAAT 163
Score = 38.7 bits (86), Expect = 0.10
Identities = 24/89 (26%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Frame = +3
Query: 9 MKQIVANQKVKIPDGLTVHVKSR-----LVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKV 173
M+ + + ++V+IP G++V ++ +V VKGP G + + FK+ V + + + +++ +
Sbjct: 1 MRVVYSVEEVEIPKGVSVSIERTGPFDYIVKVKGPLGEVTKEFKNTPVVMSLQDGKIV-M 59
Query: 174 EKWFGSKKELAAVRTVCSHVENMIKGVLK 260
E + K+E A + T ++NM GV +
Sbjct: 60 EVFKARKREYAILGTYKGILKNMFLGVTR 88
>UniRef50_Q74MR6 Cluster: 50S ribosomal protein L6P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L6P -
Nanoarchaeum equitans
Length = 192
Score = 56.0 bits (129), Expect = 6e-07
Identities = 27/101 (26%), Positives = 55/101 (54%)
Frame = +3
Query: 9 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFG 188
M+ + ++ IP+ + V ++ ++ V GP+G ++R F H + + VN + +E +F
Sbjct: 1 MRIPIIKYEIPIPENVKVSYENNILKVSGPKGEVERKFYHPLIKLS-VNDNKIILETYFA 59
Query: 189 SKKELAAVRTVCSHVENMIKGVLKASNTRCVLCMLTSPLTV 311
+++E + T SH++NM++GV R +C P+ V
Sbjct: 60 TRREKRLINTWRSHIKNMLEGVQNPFVYRLKVCYTHFPMRV 100
Score = 52.0 bits (119), Expect = 1e-05
Identities = 38/107 (35%), Positives = 55/107 (51%), Gaps = 8/107 (7%)
Frame = +2
Query: 200 ACRREDSLF-TCREHD*RSTKGFQ----YKMRAVYAHFPINCVTTEGNSIIEIRNFLGEK 364
A RRE L T R H +G Q Y+++ Y HFP+ V EGN +I + NFLGEK
Sbjct: 59 ATRREKRLINTWRSHIKNMLEGVQNPFVYRLKVCYTHFPMR-VKLEGNKLI-VENFLGEK 116
Query: 365 --YIRRVKMAPGVTV-VNSPKQKDELIIEGNSLEDVSSSAALIQQST 496
I+ + V V + K + E+++E E A++I+QST
Sbjct: 117 APIIKELPYLDKVKVKIEQNKDETEIVVESPDKEKAGIVASMIEQST 163
>UniRef50_Q97BW0 Cluster: 50S ribosomal protein L6P; n=1;
Thermoplasma volcanium|Rep: 50S ribosomal protein L6P -
Thermoplasma volcanium
Length = 178
Score = 54.8 bits (126), Expect = 1e-06
Identities = 31/83 (37%), Positives = 53/83 (63%)
Frame = +2
Query: 257 KGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELI 436
+GFQY+M+ Y+HFP+ V+ +G +++ I NF GE+ R ++ G T V+ + D L
Sbjct: 83 EGFQYEMKIDYSHFPMR-VSVKGKTVV-IENFFGERSPRTAEIV-GETQVS--VKGDRLF 137
Query: 437 IEGNSLEDVSSSAALIQQSTTVK 505
+ G S +DV +AA I+++T +K
Sbjct: 138 LNGPSKKDVGETAANIERATIIK 160
>UniRef50_P14135 Cluster: 50S ribosomal protein L6P; n=5;
Halobacteriaceae|Rep: 50S ribosomal protein L6P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 178
Score = 54.0 bits (124), Expect = 3e-06
Identities = 33/86 (38%), Positives = 50/86 (58%)
Frame = +2
Query: 254 TKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDEL 433
T+G++Y M Y+HFP+ V EG+ ++ I NFLGEK RR + G T V +EL
Sbjct: 78 TEGWEYGMEVFYSHFPMQ-VNVEGDEVV-IENFLGEKAPRRTTI-HGDTDVEI--DGEEL 132
Query: 434 IIEGNSLEDVSSSAALIQQSTTVKNR 511
+ G +E V +AA I+Q T + ++
Sbjct: 133 TVSGPDIEAVGQTAADIEQLTRINDK 158
Score = 33.9 bits (74), Expect = 3.0
Identities = 19/74 (25%), Positives = 38/74 (51%)
Frame = +3
Query: 33 KVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAV 212
+++IP+ + +TV+G G + R + +D+ V+ + +E + K ++ +
Sbjct: 5 ELEIPEDVDAEQDHLDITVEGDNGSVTRRLWYPDIDVS-VDGDTVVIESDEDNAKTMSTI 63
Query: 213 RTVCSHVENMIKGV 254
T SH+ENM GV
Sbjct: 64 GTFQSHIENMFHGV 77
>UniRef50_Q3LWE8 Cluster: Ribosomal protein L9; n=1; Bigelowiella
natans|Rep: Ribosomal protein L9 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 190
Score = 53.6 bits (123), Expect = 3e-06
Identities = 26/86 (30%), Positives = 45/86 (52%)
Frame = +2
Query: 254 TKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDEL 433
+KGF Y ++ VY+HFPI+ + + +EI N G K I + V V + K E+
Sbjct: 85 SKGFTYLLKIVYSHFPISVKYIQNENTLEITNLFGLKRIDSFFIPSSVQVCTNNLNKKEI 144
Query: 434 IIEGNSLEDVSSSAALIQQSTTVKNR 511
I+ +E + ++LIQ ++ N+
Sbjct: 145 ILLSKDIETLGILSSLIQNKCSINNK 170
Score = 46.4 bits (105), Expect = 5e-04
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Frame = +3
Query: 9 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDI--RMVNPRLLKVEKW 182
MK ++ + +P + + +K + + KG G L + F + V+I + + L V +
Sbjct: 1 MKHVLVQSIINVPKDVKIRIKEKTIYTKGINGELSKKFNNKNVNIIYKKNDSNSLIVRCY 60
Query: 183 FGSKKELAAVRTVCSHVENMIKGVLK 260
+ +K A VRT+ S + NMI GV K
Sbjct: 61 YNNKSSSAIVRTITSIIYNMIIGVSK 86
>UniRef50_A7DSX9 Cluster: Ribosomal protein L6; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L6
- Candidatus Nitrosopumilus maritimus SCM1
Length = 185
Score = 53.6 bits (123), Expect = 3e-06
Identities = 32/85 (37%), Positives = 50/85 (58%)
Frame = +2
Query: 257 KGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELI 436
+G+ KM+ V+AHFPI V EG I+ I NF GE+ R + V+ PK +D ++
Sbjct: 86 EGYTIKMKVVFAHFPIT-VKVEGKKIL-IENFQGERAPRSTHIMGNTKVI--PKGED-VL 140
Query: 437 IEGNSLEDVSSSAALIQQSTTVKNR 511
+ G D++ +AA I+ +T VKN+
Sbjct: 141 LTGEVWTDITQTAANIELTTKVKNK 165
Score = 43.6 bits (98), Expect = 0.004
Identities = 22/93 (23%), Positives = 51/93 (54%)
Frame = +3
Query: 33 KVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAV 212
+V+IP+G+TV ++ +GP G +NF+++ V I + + + + ++ K++ A +
Sbjct: 12 QVEIPEGVTVTQNKNMLLFEGPLGKTHKNFRNIPVKIEIADGK-VNLKTIGERKRDYAIL 70
Query: 213 RTVCSHVENMIKGVLKASNTRCVLCMLTSPLTV 311
T S + N+ +G+++ + + P+TV
Sbjct: 71 HTARSIIRNICEGLVEGYTIKMKVVFAHFPITV 103
>UniRef50_Q673R2 Cluster: 50S ribosomal protein L6P; n=2;
environmental samples|Rep: 50S ribosomal protein L6P -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 188
Score = 53.2 bits (122), Expect = 5e-06
Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Frame = +2
Query: 260 GFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAP--GVTVVNSPKQKDEL 433
GF+YK++AVY+HFP+ + GN + + N GEK + RV P V + K ++
Sbjct: 85 GFEYKLKAVYSHFPMT-IRVNGNQ-MTVTNLFGEK-VPRVAALPWSPAEVEVKVQNKTDV 141
Query: 434 IIEGNSLEDVSSSAALIQQSTTVKNR 511
+ G E V +AA I++S +KNR
Sbjct: 142 TVSGADREKVGQTAANIERSCRIKNR 167
Score = 41.9 bits (94), Expect = 0.011
Identities = 25/74 (33%), Positives = 38/74 (51%)
Frame = +3
Query: 33 KVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAV 212
K+ +P+G+T V VTV L R F+H +++R + L+V KKE A
Sbjct: 10 KISLPEGVTAAVNGNDVTVAKDGNSLTREFRHPRIEVRDSSGE-LEVFVNLPRKKEKALA 68
Query: 213 RTVCSHVENMIKGV 254
T +H+ NM +GV
Sbjct: 69 GTWAAHLTNMARGV 82
>UniRef50_Q6L1B1 Cluster: 50S ribosomal protein L6P; n=3;
Thermoplasmatales|Rep: 50S ribosomal protein L6P -
Picrophilus torridus
Length = 180
Score = 52.0 bits (119), Expect = 1e-05
Identities = 29/85 (34%), Positives = 48/85 (56%)
Frame = +2
Query: 254 TKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDEL 433
TKGF+Y M+ + HFP+ V+ G+ +I + NFLGEK R K+ G V + D +
Sbjct: 82 TKGFEYHMKIDFTHFPMR-VSVRGDKLI-VENFLGEKSPRSAKIVDGCKV---SVKGDRI 136
Query: 434 IIEGNSLEDVSSSAALIQQSTTVKN 508
I G + +AA I+++T +++
Sbjct: 137 TINGIDKRKIGETAANIERATYIRH 161
>UniRef50_Q8TW14 Cluster: 50S ribosomal protein L6P; n=3; cellular
organisms|Rep: 50S ribosomal protein L6P - Methanopyrus
kandleri
Length = 204
Score = 50.8 bits (116), Expect = 2e-05
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Frame = +2
Query: 254 TKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMA-PGVTVVNSPKQKDE 430
T+G +YK++ VY+HFP + + I NF+GE R ++ P T V Q +
Sbjct: 100 TEGHEYKLKLVYSHFPPEVKVDQKEGKVYIENFMGENVPRVAEIVDPENTEV--IVQGQD 157
Query: 431 LIIEGNSLEDVSSSAALIQQSTTVKNR 511
+I+ G E V +AA ++Q+T +K+R
Sbjct: 158 IIVRGIDKEAVGQTAANLEQATYIKDR 184
Score = 37.5 bits (83), Expect = 0.24
Identities = 23/84 (27%), Positives = 47/84 (55%), Gaps = 5/84 (5%)
Frame = +3
Query: 18 IVANQKVKIPDGLTVHVKSRL-----VTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKW 182
IV ++VKI D + + + R VTVKGP+G + + F + V + + + ++ +
Sbjct: 17 IVMEERVKIKDDVEIEISQREDRRYEVTVKGPKGEVTKEFYYPDVYLWVEDDEVV-IAAT 75
Query: 183 FGSKKELAAVRTVCSHVENMIKGV 254
++++ A + + +++ENM KGV
Sbjct: 76 RSNRRQKAILGMIKAYIENMQKGV 99
>UniRef50_Q8PV34 Cluster: 50S ribosomal protein L6P; n=4;
Methanomicrobia|Rep: 50S ribosomal protein L6P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 176
Score = 47.6 bits (108), Expect = 2e-04
Identities = 25/92 (27%), Positives = 50/92 (54%)
Frame = +3
Query: 36 VKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVR 215
++IP+G++V + + T KGP+G ++R F + + I + ++ V+ K++ A V
Sbjct: 9 IEIPEGVSVSLSQDVFTAKGPKGTVERTFWYPGIKIEVREGEVV-VDAESSRKEQKAMVG 67
Query: 216 TVCSHVENMIKGVLKASNTRCVLCMLTSPLTV 311
T SH++N+I GV + + + P+ V
Sbjct: 68 TFASHLKNLIIGVSEGFECKMNIVYAHFPMQV 99
>UniRef50_A4M9T7 Cluster: 50S ribosomal protein L6; n=3;
Thermotogaceae|Rep: 50S ribosomal protein L6 - Petrotoga
mobilis SJ95
Length = 186
Score = 46.4 bits (105), Expect = 5e-04
Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 6/84 (7%)
Frame = +3
Query: 21 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNF-KHLAVDIRMVNPRLLK----VEKWF 185
+A++ IPDG+ + V + + +KG G L N ++L VD R N ++K V K
Sbjct: 6 IADKPTIIPDGVELSVDGQTIKIKGKNGELSLNLPEYLEVD-RDNNELMIKTKEGVVKRS 64
Query: 186 GSKKELAAVR-TVCSHVENMIKGV 254
+K L A+R T SHV NMIKGV
Sbjct: 65 SDEKRLKALRGTFTSHVRNMIKGV 88
>UniRef50_Q5AEN3 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 140
Score = 45.6 bits (103), Expect = 0.001
Identities = 33/87 (37%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Frame = -2
Query: 508 ILDCSRLLNESSRARDIFQRVAFND*FILLFWRVNDSHTRCHLYPSDVFLTQEVTYLNN* 329
+ D + LLN SS R+ FQ V N+ FILL R T S+ F TQE++ N
Sbjct: 40 VSDTTDLLNISSILRNSFQGVTRNNQFILLSRRNFHGDTFMDFNFSNSFFTQEISNFNVI 99
Query: 328 ITL--SGDTVNGEVSIHSTHLVLEAFS 254
+T+ + VN E+ I+ +HLV FS
Sbjct: 100 LTIFFNNVNVNWEMRINKSHLVFVTFS 126
>UniRef50_Q8ETW8 Cluster: 50S ribosomal protein L6; n=40;
Bacteria|Rep: 50S ribosomal protein L6 - Oceanobacillus
iheyensis
Length = 178
Score = 43.2 bits (97), Expect = 0.005
Identities = 28/80 (35%), Positives = 43/80 (53%)
Frame = +3
Query: 21 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 200
V + V+IP+G+ + + + VTVKGP+G L R H + I + +L VE+ K+
Sbjct: 4 VGLKPVEIPEGVELKLDNNTVTVKGPKGELSREL-HPDMKIN-IEDNVLTVERPSDHKEH 61
Query: 201 LAAVRTVCSHVENMIKGVLK 260
A T S + NM+ GV K
Sbjct: 62 RALHGTTRSLINNMVIGVSK 81
>UniRef50_Q48D51 Cluster: 50S ribosomal protein L6; n=6;
Proteobacteria|Rep: 50S ribosomal protein L6 -
Pseudomonas syringae pv. phaseolicola (strain 1448A /
Race 6)
Length = 179
Score = 42.7 bits (96), Expect = 0.006
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Frame = +3
Query: 21 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPR-LLKVEKWFGSKK 197
VA VK+P G+ V + +L++VKGP+G L+ H +V++ +V L+ G ++
Sbjct: 4 VAKNPVKLPSGVEVKLVGQLLSVKGPKGTLEL-IIHSSVEVEIVEEAGELRFAARNGDQQ 62
Query: 198 ELAAVRTVCSHVENMIKGV 254
A T + V NM++GV
Sbjct: 63 TRAMAGTTRALVNNMVQGV 81
>UniRef50_Q6E6D2 Cluster: Large subunit ribosomal protein L9e; n=1;
Antonospora locustae|Rep: Large subunit ribosomal
protein L9e - Antonospora locustae (Nosema locustae)
Length = 160
Score = 42.3 bits (95), Expect = 0.008
Identities = 27/98 (27%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
Frame = +3
Query: 9 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKH--LAVDIRMVNPRLLKVEKW 182
MK+++ +KV+IP+G +V + R++TV+G R R+ H L +D+ + RL ++
Sbjct: 1 MKRLLCEEKVEIPEGCSVEILERVMTVRGKRATAVRDLSHFVLTMDVHEGHVRL----RY 56
Query: 183 FGSKKELAAVRTVCSHVENMIKGVLKASNTRCVLCMLT 296
+++ VC +N I G + LC T
Sbjct: 57 GMAQQGAQQADYVCICDQNCIVGCMSGYEYTLRLCTST 94
>UniRef50_A0BWM5 Cluster: Chromosome undetermined scaffold_132,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_132,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 167
Score = 41.9 bits (94), Expect = 0.011
Identities = 22/69 (31%), Positives = 41/69 (59%), Gaps = 9/69 (13%)
Frame = +3
Query: 75 RLVTVKGPRGVLKRNFKHLAVDIRMVNP-------RLLKVE--KWFGSKKELAAVRTVCS 227
+L+ + GPRG+L RNFKH ++DI++ L+K+E K+ V+++ +
Sbjct: 53 KLIMIIGPRGILNRNFKHASLDIQVQKEIKEIKQIGLIKIEYQDVVQYSKQRFQVKSIAA 112
Query: 228 HVENMIKGV 254
++NMI+G+
Sbjct: 113 QIKNMIRGI 121
Score = 32.3 bits (70), Expect = 9.1
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +2
Query: 392 GVTVVNSP-KQKDELIIEGNSLEDVSSSAALIQQSTTVKNR 511
GV + ++K+ LI+ N L +VS + ALI Q+ VKN+
Sbjct: 124 GVVITRKEAEEKNVLILSANDLNNVSLTCALIHQACAVKNK 164
>UniRef50_P46898 Cluster: 50S ribosomal protein L6; n=7;
Bacilli|Rep: 50S ribosomal protein L6 - Bacillus
subtilis
Length = 179
Score = 38.7 bits (86), Expect = 0.10
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Frame = +3
Query: 21 VANQKVKIPDGLTVHVK-SRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKK 197
V + ++IP +TV + + V VKGP+G L R F H ++I+ V +L V + K+
Sbjct: 4 VGKKLLEIPSDVTVTLNDNNTVAVKGPKGELTRTF-HPDMEIK-VEDNVLTVARPSDQKE 61
Query: 198 ELAAVRTVCSHVENMIKGVLK 260
A T S + NM++GV K
Sbjct: 62 HRALHGTTRSLLGNMVEGVSK 82
>UniRef50_Q9ZAE4 Cluster: 50S ribosomal protein L6; n=4; cellular
organisms|Rep: 50S ribosomal protein L6 - Thermotoga
maritima
Length = 184
Score = 38.3 bits (85), Expect = 0.14
Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Frame = +3
Query: 21 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNF-KHLAVDIR----MVNPRLLKVEKWF 185
+A + + +P G+TV +K +V VKGP+G L + F ++ +++ V P ++ +
Sbjct: 4 LAKKPIVLPQGVTVEIKDNVVKVKGPKGELSQEFLPYVKIEVEGNEVWVRPNEEQIIRKS 63
Query: 186 GSKKELAAVRTVCSHVENMIKGV 254
+K T S + NM+ GV
Sbjct: 64 DWRKVKMFQGTYWSLIRNMVVGV 86
>UniRef50_Q3ZZN4 Cluster: 50S ribosomal protein L6; n=7;
Bacteria|Rep: 50S ribosomal protein L6 - Dehalococcoides
sp. (strain CBDB1)
Length = 182
Score = 38.3 bits (85), Expect = 0.14
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +3
Query: 21 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFK 125
+ +K+P G+ V + VTVKGP+G L R+F+
Sbjct: 4 IGKMPIKVPPGIKVDINGNDVTVKGPKGTLSRSFR 38
>UniRef50_A5GIT1 Cluster: 50S ribosomal protein L6; n=7;
Bacteria|Rep: 50S ribosomal protein L6 - Synechococcus
sp. (strain WH7803)
Length = 179
Score = 37.1 bits (82), Expect = 0.32
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +3
Query: 21 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 200
+ + IPD ++V + VTVKGP+G LKR V + V+ ++ K++
Sbjct: 4 IGKSPIPIPDKVSVSLDGLAVTVKGPKGELKRTLPD-GVTVNQVDNTIVVAPT--SEKRQ 60
Query: 201 LAAVRTVC-SHVENMIKGVLK 260
+C + V NMI+GV K
Sbjct: 61 SRERHGLCRTLVANMIEGVSK 81
>UniRef50_Q7UN05 Cluster: 50S ribosomal protein L6; n=3;
Planctomycetaceae|Rep: 50S ribosomal protein L6 -
Rhodopirellula baltica
Length = 181
Score = 36.3 bits (80), Expect = 0.56
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +3
Query: 21 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKH 128
+ N+ V IP G+TV + R + V+GP+G K +FKH
Sbjct: 4 IGNKPVAIPSGVTVSIADRNIDVEGPKG--KLSFKH 37
>UniRef50_Q9RSL3 Cluster: 50S ribosomal protein L6; n=65; cellular
organisms|Rep: 50S ribosomal protein L6 - Deinococcus
radiodurans
Length = 185
Score = 36.3 bits (80), Expect = 0.56
Identities = 23/78 (29%), Positives = 41/78 (52%)
Frame = +3
Query: 21 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 200
+ Q + +P G+TV+ + + VKGP+G L + + + +R +LL VE+ ++K
Sbjct: 4 IGKQPIAVPSGVTVNAQDGVFKVKGPKGELTVPY-NTELTVRQDGDQLL-VERPSDAQKH 61
Query: 201 LAAVRTVCSHVENMIKGV 254
A + V N +KGV
Sbjct: 62 RALHGLTRTLVANAVKGV 79
>UniRef50_Q83ER1 Cluster: 50S ribosomal protein L6; n=108;
Proteobacteria|Rep: 50S ribosomal protein L6 - Coxiella
burnetii
Length = 178
Score = 36.3 bits (80), Expect = 0.56
Identities = 26/78 (33%), Positives = 38/78 (48%)
Frame = +3
Query: 21 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 200
VA +KIP G+ V+V + +TVKG G L R H AV + + L + S
Sbjct: 5 VAKNPIKIPTGVEVNVAGQQITVKGKLGTLTRVI-HRAVKVTKTDAELQTICA-NDSPGS 62
Query: 201 LAAVRTVCSHVENMIKGV 254
A T + + NM++GV
Sbjct: 63 NALAGTARAVLANMVQGV 80
>UniRef50_A5LSZ6 Cluster: 50S ribosomal protein L6; n=1;
Streptococcus pneumoniae SP9-BS68|Rep: 50S ribosomal
protein L6 - Streptococcus pneumoniae SP9-BS68
Length = 139
Score = 34.7 bits (76), Expect = 1.7
Identities = 23/78 (29%), Positives = 40/78 (51%)
Frame = +3
Query: 21 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 200
+ N+ + +P G+ + +VTVKGP+G L R F ++IR V + + + SK+
Sbjct: 4 IGNKVIVLPAGVELANNDNVVTVKGPKGELTREFSK-DIEIR-VEGTEITLHRPNDSKEM 61
Query: 201 LAAVRTVCSHVENMIKGV 254
T + + NM+ GV
Sbjct: 62 KTIHGTTRALLNNMVVGV 79
>UniRef50_Q11HR7 Cluster: 50S ribosomal protein L6; n=73;
Proteobacteria|Rep: 50S ribosomal protein L6 -
Mesorhizobium sp. (strain BNC1)
Length = 177
Score = 34.7 bits (76), Expect = 1.7
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +3
Query: 21 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLK 113
+ + V +P G+T +V ++VT KGP+G LK
Sbjct: 4 IGKKPVPVPQGVTANVDGQVVTAKGPKGELK 34
>UniRef50_Q4QI55 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 946
Score = 34.3 bits (75), Expect = 2.3
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = -2
Query: 247 LIMFSTCEQTVLTAASSFLDPNHFSTFRRRGFTMRMSTA--KCLKFLLRTPRGPLTVTRR 74
L +F+ C ++V+ A+S L P+H + R GF + TA + FL R PL + R
Sbjct: 22 LELFAACRESVVHVAASHLLPDHVAVTTRNGFVELIDTATGEFRLFLTYLDRIPLDASLR 81
Query: 73 DFT 65
F+
Sbjct: 82 CFS 84
>UniRef50_Q6YR07 Cluster: 50S ribosomal protein L6; n=16;
Firmicutes|Rep: 50S ribosomal protein L6 - Onion yellows
phytoplasma
Length = 184
Score = 34.3 bits (75), Expect = 2.3
Identities = 13/37 (35%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = +3
Query: 21 VANQKVKIPDGLTVHVKSR-LVTVKGPRGVLKRNFKH 128
V N+ +++P+ + V +K R ++V+GP+G L+ F H
Sbjct: 4 VGNKAIEVPNAVKVDIKDRNFISVEGPKGKLEYQFNH 40
>UniRef50_Q8A491 Cluster: 50S ribosomal protein L6; n=34;
Bacteria|Rep: 50S ribosomal protein L6 - Bacteroides
thetaiotaomicron
Length = 189
Score = 34.3 bits (75), Expect = 2.3
Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Frame = +3
Query: 36 VKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVE---KWFGSKKELA 206
+ IP G+TV +K +VTVKGP+G L + + + A+++ + + + E + + K+
Sbjct: 9 ISIPAGVTVTLKDDVVTVKGPKGELSQ-YVNPAINVAIEDGHVTLTENEKEMIDNPKQKH 67
Query: 207 AVRTVC-SHVENMIKGV 254
A + S V NM+ GV
Sbjct: 68 AFHGLYRSLVHNMVVGV 84
>UniRef50_A6S819 Cluster: Citrate synthase; n=1; Botryotinia
fuckeliana B05.10|Rep: Citrate synthase - Botryotinia
fuckeliana B05.10
Length = 534
Score = 33.9 bits (74), Expect = 3.0
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = -2
Query: 328 ITLSGDTVNGEVSIHSTHLVLEAFSTPLIMFS 233
+ L GD G VS H+THLV A S P + +S
Sbjct: 297 LALHGDHEGGNVSAHTTHLVGSALSDPFLSYS 328
>UniRef50_Q0ID19 Cluster: 50S ribosomal protein L6; n=6;
Bacteria|Rep: 50S ribosomal protein L6 - Synechococcus
sp. (strain CC9311)
Length = 179
Score = 33.5 bits (73), Expect = 3.9
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +3
Query: 21 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 200
+ + IPD + V + VTVKGP+G LKR V + V+ ++ +K+
Sbjct: 4 IGKNPIPIPDKVNVTLSGLAVTVKGPKGELKRTLPS-GVSVNQVDNSIVVAPT--STKRS 60
Query: 201 LAAVRTVC-SHVENMIKGV 254
+C + V NM+ GV
Sbjct: 61 SRERHGLCRTLVANMVIGV 79
>UniRef50_P92943 Cluster: Chloride channel protein CLC-d; n=8;
Magnoliophyta|Rep: Chloride channel protein CLC-d -
Arabidopsis thaliana (Mouse-ear cress)
Length = 792
Score = 33.1 bits (72), Expect = 5.2
Identities = 23/76 (30%), Positives = 39/76 (51%)
Frame = +2
Query: 299 PINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAA 478
P V E S+ ++ N + +R + + P + V + +L+IE N SSA
Sbjct: 706 PSPYVVPEDMSLTKVYNLFRQLGLRHLFVVPRPSRVIGLITRKDLLIEENG----ESSAV 761
Query: 479 LIQQSTTVKNRISESS 526
+QQST+V+ R SE++
Sbjct: 762 ELQQSTSVRGRYSETA 777
>UniRef50_Q6KI40 Cluster: 50S ribosomal protein l6; n=4;
Mycoplasma|Rep: 50S ribosomal protein l6 - Mycoplasma
mobile
Length = 179
Score = 32.7 bits (71), Expect = 6.9
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +3
Query: 21 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHL-AVDIRMVNPRLLKVEKWFGSKK 197
V + + +P + +++K+ LV +KG GVL N L A+++ + ++ + K
Sbjct: 4 VGRRVLTLPKDVELNIKNNLVEIKGKLGVLTFNVNPLIAIEVENHEVKTIRANE---EKH 60
Query: 198 ELAAVRTVCSHVENMIKGVLK 260
T S +ENMI GV K
Sbjct: 61 TKQLHGTTNSIIENMIIGVSK 81
>UniRef50_Q8TMD2 Cluster: Putative uncharacterized protein; n=3;
Euryarchaeota|Rep: Putative uncharacterized protein -
Methanosarcina acetivorans
Length = 255
Score = 32.7 bits (71), Expect = 6.9
Identities = 21/65 (32%), Positives = 33/65 (50%)
Frame = +2
Query: 326 NSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVK 505
+SI + NF +K+ R V + PGV V +S + KDE G DV + +Q T+
Sbjct: 51 SSIGQAENFSRKKFFRGVVLPPGVPVTSSGRIKDETGFPG----DVVIKDGIWKQGKTIF 106
Query: 506 NRISE 520
N + +
Sbjct: 107 NVVDD 111
>UniRef50_Q2JIL3 Cluster: 50S ribosomal protein L6; n=44; cellular
organisms|Rep: 50S ribosomal protein L6 - Synechococcus
sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria
bacteriumYellowstone B-Prime)
Length = 181
Score = 32.7 bits (71), Expect = 6.9
Identities = 21/89 (23%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Frame = +3
Query: 21 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 200
+ + + +P + + + + + VKGP+G L R+ L + ++ N ++L V + +
Sbjct: 4 IGRRPIALPAKVEIQIDGQHIAVKGPKGQLSRSLPPL-ITVQQ-NAQMLTVSR-LNDSRP 60
Query: 201 LAAVRTVC-SHVENMIKGVLKASNTRCVL 284
+ +C + V NM+ GV K R L
Sbjct: 61 ARQLHGLCRTLVANMVDGVSKGFERRLEL 89
>UniRef50_Q9ZCS0 Cluster: 50S ribosomal protein L6; n=10;
Rickettsieae|Rep: 50S ribosomal protein L6 - Rickettsia
prowazekii
Length = 177
Score = 32.7 bits (71), Expect = 6.9
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = +3
Query: 21 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFK-HLAVDIRMVNPRLLKVEKWFGSKK 197
V + IP+G+ V + V + GP+G L + FK ++A+ ++ L V+ +K
Sbjct: 4 VGKLPITIPEGVKVGLNDLEVKISGPKGELSKTFKGNIAI---IMEENKLVVKPLAVNKN 60
Query: 198 ELAAVRTVCSHVENMIKGV 254
A T S + NMI GV
Sbjct: 61 ARAMWGTARSIICNMITGV 79
>UniRef50_Q1E190 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 405
Score = 32.3 bits (70), Expect = 9.1
Identities = 22/74 (29%), Positives = 31/74 (41%)
Frame = -2
Query: 268 LEAFSTPLIMFSTCEQTVLTAASSFLDPNHFSTFRRRGFTMRMSTAKCLKFLLRTPRGPL 89
L F P ++ S C L + S + P ++ RRR R+ + P GP
Sbjct: 64 LVMFKKPSLLCSCCGSIQLLNSPSSISPQSATSSRRRPHPFRL-PRRFAHVHSTNPLGP- 121
Query: 88 TVTRRDFTWTVSPS 47
RDFTW SP+
Sbjct: 122 ---ERDFTWPTSPT 132
>UniRef50_Q5FM76 Cluster: 50S ribosomal protein L6; n=10;
Firmicutes|Rep: 50S ribosomal protein L6 - Lactobacillus
acidophilus
Length = 176
Score = 32.3 bits (70), Expect = 9.1
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +3
Query: 36 VKIPDGLTVHVKSRLVTVKGPRGVLKRNF 122
+++PD +TV + +TVKGP+G L R F
Sbjct: 9 IEVPDSVTVTKEGDNITVKGPKGELTRYF 37
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 604,301,857
Number of Sequences: 1657284
Number of extensions: 12134410
Number of successful extensions: 29623
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 28751
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29587
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 42732687689
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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