Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30640
         (762 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    54   9e-10
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    54   9e-10
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    51   1e-08
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    23   3.5  

>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 54.4 bits (125), Expect = 9e-10
 Identities = 28/38 (73%), Positives = 29/38 (76%)
 Frame = +3

Query: 579 INEPTAAAIAYGLDKKGTGERNVLIFGPRRRYFDVSIL 692
           INEPTAAAIAYGLDKK   ERNVLIF      FDVS+L
Sbjct: 1   INEPTAAAIAYGLDKKAEKERNVLIFDLGGGTFDVSLL 38



 Score = 32.7 bits (71), Expect = 0.003
 Identities = 13/15 (86%), Positives = 14/15 (93%)
 Frame = +2

Query: 707 GIFEVKSTAGDTHFG 751
           GIFEVK+TAGDTH G
Sbjct: 43  GIFEVKATAGDTHLG 57



 Score = 25.8 bits (54), Expect = 0.38
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = +1

Query: 649 LSLDLGGGTSTCPSLTIEDG 708
           L  DLGGGT     LTIE+G
Sbjct: 24  LIFDLGGGTFDVSLLTIEEG 43


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 54.4 bits (125), Expect = 9e-10
 Identities = 28/38 (73%), Positives = 29/38 (76%)
 Frame = +3

Query: 579 INEPTAAAIAYGLDKKGTGERNVLIFGPRRRYFDVSIL 692
           INEPTAAAIAYGLDKK   ERNVLIF      FDVS+L
Sbjct: 1   INEPTAAAIAYGLDKKAERERNVLIFDLGGGTFDVSLL 38



 Score = 32.7 bits (71), Expect = 0.003
 Identities = 13/15 (86%), Positives = 14/15 (93%)
 Frame = +2

Query: 707 GIFEVKSTAGDTHFG 751
           GIFEVK+TAGDTH G
Sbjct: 43  GIFEVKATAGDTHLG 57



 Score = 25.8 bits (54), Expect = 0.38
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = +1

Query: 649 LSLDLGGGTSTCPSLTIEDG 708
           L  DLGGGT     LTIE+G
Sbjct: 24  LIFDLGGGTFDVSLLTIEEG 43


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 50.8 bits (116), Expect = 1e-08
 Identities = 26/38 (68%), Positives = 30/38 (78%)
 Frame = +3

Query: 579 INEPTAAAIAYGLDKKGTGERNVLIFGPRRRYFDVSIL 692
           INEPTAAAIAYGLDKKG  E+N+L++      FDVSIL
Sbjct: 1   INEPTAAAIAYGLDKKG-AEQNILVYDLGGGTFDVSIL 37



 Score = 28.3 bits (60), Expect = 0.071
 Identities = 10/15 (66%), Positives = 13/15 (86%)
 Frame = +2

Query: 707 GIFEVKSTAGDTHFG 751
           G+FEV +T+GDTH G
Sbjct: 42  GVFEVVATSGDTHLG 56



 Score = 23.8 bits (49), Expect = 1.5
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +1

Query: 649 LSLDLGGGTSTCPSLTIEDG 708
           L  DLGGGT     LTI++G
Sbjct: 23  LVYDLGGGTFDVSILTIDNG 42


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 122 LPAREGGDHRQRPGQQDH 175
           +P R+  DHR RP +  H
Sbjct: 246 IPIRQCDDHRDRPPRHFH 263


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,796
Number of Sequences: 336
Number of extensions: 4838
Number of successful extensions: 16
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)