Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30640
(762 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 235 3e-62
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 228 3e-60
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 211 5e-55
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 211 5e-55
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 201 4e-52
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 201 5e-52
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 199 2e-51
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 199 2e-51
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 145 3e-35
X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 142 3e-34
Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical p... 122 4e-28
Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical pr... 122 4e-28
Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical pr... 91 1e-18
L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 83 3e-16
Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical pr... 72 4e-13
Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical pr... 72 4e-13
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 64 8e-11
Z68753-7|CAA92987.1| 240|Caenorhabditis elegans Hypothetical pr... 32 0.51
AF039044-13|AAG24128.2| 435|Caenorhabditis elegans Hypothetical... 32 0.51
Z81592-7|CAB63314.1| 436|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z81592-6|CAB04733.2| 431|Caenorhabditis elegans Hypothetical pr... 29 2.7
AC024813-3|AAK27881.1| 461|Caenorhabditis elegans Est (ever sho... 29 4.8
AC024813-2|ABE73329.1| 1027|Caenorhabditis elegans Est (ever sho... 29 4.8
AC024813-1|AAK27880.3| 1241|Caenorhabditis elegans Est (ever sho... 29 4.8
Z80220-6|CAB02305.1| 282|Caenorhabditis elegans Hypothetical pr... 28 8.3
U39996-7|AAA81093.1| 1667|Caenorhabditis elegans Temporarily ass... 28 8.3
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 235 bits (574), Expect = 3e-62
Identities = 133/216 (61%), Positives = 151/216 (69%), Gaps = 6/216 (2%)
Frame = +3
Query: 63 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 242
M+K AVGIDLGTTYSCVGVF HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
Sbjct: 1 MSKHNAVGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 243 MNP-NTQYSMPNVSSDVSSKMLLCKPT*STGLSRYP---VMEANLRSR*HIRVK--TKTF 404
MNP NT + + + K P + + +P + + + + K K F
Sbjct: 61 MNPHNTVFDAKRL---IGRKF--DDPAVQSDMKHWPFKVISAEGAKPKVQVEYKGENKIF 115
Query: 405 FPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYSMTLKDKPQKMQVPSLGLNVLRIIN 584
PEE+SSMVL KMKETAEA+LG TV++AV+TVPAY + + K GLNVLRIIN
Sbjct: 116 TPEEISSMVLLKMKETAEAFLGTTVKDAVVTVPAYFNDSQRQATKDAGAIAGLNVLRIIN 175
Query: 585 EPTAAAIAYGLDKKGTGERNVLIFGPRRRYFDVSIL 692
EPTAAAIAYGLDKKG GERNVLIF FDVSIL
Sbjct: 176 EPTAAAIAYGLDKKGHGERNVLIFDLGGGTFDVSIL 211
Score = 114 bits (274), Expect = 7e-26
Identities = 69/169 (40%), Positives = 86/169 (50%), Gaps = 1/169 (0%)
Frame = +2
Query: 248 PQHTIFDAKRLIGRKFEDATVQADMKHWPFEV-SSDGGKPKIKVAYKGEDKNLFPRGSQF 424
P +T+FDAKRLIGRKF+D VQ+DMKHWPF+V S++G KPK++V YKGE+K P
Sbjct: 63 PHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQVEYKGENKIFTPEEISS 122
Query: 425 HGAYENEGNCRSLSWQNCAECSYHGSRVFNDSQRQATKDAGTISGLERSPNHQ*TDCCCD 604
+ + + + FNDSQRQATKDAG I+GL
Sbjct: 123 MVLLKMKETAEAFLGTTVKDAVVTVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAAI 182
Query: 605 CLRS*QKGYWRTKCTYLWTSAAVLRRVHP*PSRMGIFEVKSTAGDTHFG 751
+KG+ V GIFEVKSTAGDTH G
Sbjct: 183 AYGLDKKGHGERNVLIFDLGGGTFD-VSILTIEDGIFEVKSTAGDTHLG 230
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 228 bits (558), Expect = 3e-60
Identities = 130/216 (60%), Positives = 149/216 (68%), Gaps = 6/216 (2%)
Frame = +3
Query: 63 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 242
M+K AVGIDLGTTYSCVGVF HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
Sbjct: 1 MSKHNAVGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 243 MNP-NTQYSMPNVSSDVSSKMLLCKPT*STGLSRYP---VMEANLRSR*HIRVK--TKTF 404
MNP NT + + + K P + + +P + + + + K K F
Sbjct: 61 MNPHNTVFDAKRL---IGRK--FDDPAVQSDMKHWPFKVISAEGAKPKVQVEYKGENKIF 115
Query: 405 FPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYSMTLKDKPQKMQVPSLGLNVLRIIN 584
PEE+SSMVL KMK+TAEA+L TV++AV+TVP Y + + K GLNVLRIIN
Sbjct: 116 TPEEISSMVLLKMKKTAEAFLEPTVKDAVVTVPTYFNDSQRQATKDAGAIAGLNVLRIIN 175
Query: 585 EPTAAAIAYGLDKKGTGERNVLIFGPRRRYFDVSIL 692
EPTAAAIAYGLDKKG GERNVLIF FDVSIL
Sbjct: 176 EPTAAAIAYGLDKKGHGERNVLIFDLGGGTFDVSIL 211
Score = 113 bits (273), Expect = 1e-25
Identities = 69/169 (40%), Positives = 86/169 (50%), Gaps = 1/169 (0%)
Frame = +2
Query: 248 PQHTIFDAKRLIGRKFEDATVQADMKHWPFEV-SSDGGKPKIKVAYKGEDKNLFPRGSQF 424
P +T+FDAKRLIGRKF+D VQ+DMKHWPF+V S++G KPK++V YKGE+K P
Sbjct: 63 PHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQVEYKGENKIFTPEEISS 122
Query: 425 HGAYENEGNCRSLSWQNCAECSYHGSRVFNDSQRQATKDAGTISGLERSPNHQ*TDCCCD 604
+ + + + FNDSQRQATKDAG I+GL
Sbjct: 123 MVLLKMKKTAEAFLEPTVKDAVVTVPTYFNDSQRQATKDAGAIAGLNVLRIINEPTAAAI 182
Query: 605 CLRS*QKGYWRTKCTYLWTSAAVLRRVHP*PSRMGIFEVKSTAGDTHFG 751
+KG+ V GIFEVKSTAGDTH G
Sbjct: 183 AYGLDKKGHGERNVLIFDLGGGTFD-VSILTIEDGIFEVKSTAGDTHLG 230
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 211 bits (515), Expect = 5e-55
Identities = 118/217 (54%), Positives = 146/217 (67%), Gaps = 6/217 (2%)
Frame = +3
Query: 63 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 242
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A
Sbjct: 1 MSSCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 243 MNP-NTQYSMPNVSS---DVSSKMLLCK--PT*STGLSRYPVMEANLRSR*HIRVKTKTF 404
NP NT + + D S+ CK P G PV+E ++ + + F
Sbjct: 61 RNPENTVFDAKRLIGRRFDESTVQSDCKHWPFGVKGKQGKPVIEVEVKG------EKRQF 114
Query: 405 FPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYSMTLKDKPQKMQVPSLGLNVLRIIN 584
PEE+S+MVL KMKETAE YLG TV++AVITVPAY + + K GLN +RIIN
Sbjct: 115 NPEEISAMVLQKMKETAETYLGHTVKDAVITVPAYFNDSQRQATKDAATIAGLNAIRIIN 174
Query: 585 EPTAAAIAYGLDKKGTGERNVLIFGPRRRYFDVSILN 695
EPTAAA+AYGLDK E+NVLIF FDVSIL+
Sbjct: 175 EPTAAALAYGLDKGIQDEKNVLIFDLGGGTFDVSILS 211
Score = 102 bits (245), Expect = 2e-22
Identities = 68/171 (39%), Positives = 85/171 (49%), Gaps = 3/171 (1%)
Frame = +2
Query: 248 PQHTIFDAKRLIGRKFEDATVQADMKHWPFEVSSDGGKPKIKVAYKGEDKNLFPRGSQFH 427
P++T+FDAKRLIGR+F+++TVQ+D KHWPF V GKP I+V KGE + P
Sbjct: 63 PENTVFDAKRLIGRRFDESTVQSDCKHWPFGVKGKQGKPVIEVEVKGEKRQFNPEEISAM 122
Query: 428 GAYENEGNCRSLSWQNCAECSYHGSRVFNDSQRQATKDAGTISGLE--RSPNHQ*TDCCC 601
+ + + + FNDSQRQATKDA TI+GL R N
Sbjct: 123 VLQKMKETAETYLGHTVKDAVITVPAYFNDSQRQATKDAATIAGLNAIRIINEPTAAALA 182
Query: 602 DCLRS*QKGYWRTKCTYLWTSAAVLRRVHP*PSRMG-IFEVKSTAGDTHFG 751
L KG K ++ V G IFEVKSTAGDTH G
Sbjct: 183 YGL---DKGIQDEKNVLIFDLGGGTFDVSILSIAEGSIFEVKSTAGDTHLG 230
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 211 bits (515), Expect = 5e-55
Identities = 118/217 (54%), Positives = 146/217 (67%), Gaps = 6/217 (2%)
Frame = +3
Query: 63 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 242
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A
Sbjct: 1 MSSCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 243 MNP-NTQYSMPNVSS---DVSSKMLLCK--PT*STGLSRYPVMEANLRSR*HIRVKTKTF 404
NP NT + + D S+ CK P G PV+E ++ + + F
Sbjct: 61 RNPENTVFDAKRLIGRRFDESTVQSDCKHWPFGVKGKQGKPVIEVEVKG------EKRQF 114
Query: 405 FPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYSMTLKDKPQKMQVPSLGLNVLRIIN 584
PEE+S+MVL KMKETAE YLG TV++AVITVPAY + + K GLN +RIIN
Sbjct: 115 NPEEISAMVLQKMKETAETYLGHTVKDAVITVPAYFNDSQRQATKDAATIAGLNAIRIIN 174
Query: 585 EPTAAAIAYGLDKKGTGERNVLIFGPRRRYFDVSILN 695
EPTAAA+AYGLDK E+NVLIF FDVSIL+
Sbjct: 175 EPTAAALAYGLDKGIQDEKNVLIFDLGGGTFDVSILS 211
Score = 102 bits (245), Expect = 2e-22
Identities = 68/171 (39%), Positives = 85/171 (49%), Gaps = 3/171 (1%)
Frame = +2
Query: 248 PQHTIFDAKRLIGRKFEDATVQADMKHWPFEVSSDGGKPKIKVAYKGEDKNLFPRGSQFH 427
P++T+FDAKRLIGR+F+++TVQ+D KHWPF V GKP I+V KGE + P
Sbjct: 63 PENTVFDAKRLIGRRFDESTVQSDCKHWPFGVKGKQGKPVIEVEVKGEKRQFNPEEISAM 122
Query: 428 GAYENEGNCRSLSWQNCAECSYHGSRVFNDSQRQATKDAGTISGLE--RSPNHQ*TDCCC 601
+ + + + FNDSQRQATKDA TI+GL R N
Sbjct: 123 VLQKMKETAETYLGHTVKDAVITVPAYFNDSQRQATKDAATIAGLNAIRIINEPTAAALA 182
Query: 602 DCLRS*QKGYWRTKCTYLWTSAAVLRRVHP*PSRMG-IFEVKSTAGDTHFG 751
L KG K ++ V G IFEVKSTAGDTH G
Sbjct: 183 YGL---DKGIQDEKNVLIFDLGGGTFDVSILSIAEGSIFEVKSTAGDTHLG 230
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 201 bits (491), Expect = 4e-52
Identities = 115/211 (54%), Positives = 144/211 (68%), Gaps = 7/211 (3%)
Frame = +3
Query: 81 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT--ERLIGDAAKNQVAMNP- 251
+GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAF+ ERLIGDAAKNQ+ +NP
Sbjct: 33 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFSGDQGERLIGDAAKNQLTINPE 92
Query: 252 NTQYSMPNVSSDVSSKMLLCKPT*STGLSRYPVMEANLRSR*HIRVK----TKTFFPEEV 419
NT + + ++ T + +P + ++ ++ VK TK F PEEV
Sbjct: 93 NTIFDAKRLIGRFYNEK-----TVQQDIKHWPFKIVDKSNKPNVEVKVGSETKQFTPEEV 147
Query: 420 SSMVLTKMKETAEAYLGKTVQNAVITVPAYSMTLKDKPQKMQVPSLGLNVLRIINEPTAA 599
S+MVLTKMK+ AE+YLG V+NAV+TVPAY + + K GLNV+RIINEPTAA
Sbjct: 148 SAMVLTKMKQIAESYLGHEVKNAVVTVPAYFNDAQKQATKDAGSIAGLNVVRIINEPTAA 207
Query: 600 AIAYGLDKKGTGERNVLIFGPRRRYFDVSIL 692
AIAYGLDKK GERN+L+F FDVS+L
Sbjct: 208 AIAYGLDKK-DGERNILVFDLGGGTFDVSLL 237
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 201 bits (490), Expect = 5e-52
Identities = 112/217 (51%), Positives = 143/217 (65%), Gaps = 6/217 (2%)
Frame = +3
Query: 63 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 242
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A
Sbjct: 1 MSTCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 243 MNP-NTQYSMPNV-----SSDVSSKMLLCKPT*STGLSRYPVMEANLRSR*HIRVKTKTF 404
NP NT + + + + P G PV+E ++ + + F
Sbjct: 61 RNPENTVFDAKRLIGRRFDEETVQSDIKHWPFTVKGKQGKPVVEVEVKG------EKREF 114
Query: 405 FPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYSMTLKDKPQKMQVPSLGLNVLRIIN 584
EE+S+MVL KMKETAEA LG +V++AVITVPAY + + K GLN +RIIN
Sbjct: 115 NAEEISAMVLQKMKETAEAVLGHSVRDAVITVPAYFNDSQRQATKDAATIAGLNAIRIIN 174
Query: 585 EPTAAAIAYGLDKKGTGERNVLIFGPRRRYFDVSILN 695
EPTAAA+AYGLDK T E+N+LIF FDVSIL+
Sbjct: 175 EPTAAALAYGLDKGITDEKNILIFDLGGGTFDVSILS 211
Score = 100 bits (239), Expect = 1e-21
Identities = 66/171 (38%), Positives = 86/171 (50%), Gaps = 3/171 (1%)
Frame = +2
Query: 248 PQHTIFDAKRLIGRKFEDATVQADMKHWPFEVSSDGGKPKIKVAYKGEDKNLFPRGSQFH 427
P++T+FDAKRLIGR+F++ TVQ+D+KHWPF V GKP ++V KGE +
Sbjct: 63 PENTVFDAKRLIGRRFDEETVQSDIKHWPFTVKGKQGKPVVEVEVKGEKREFNAEEISAM 122
Query: 428 GAYENEGNCRSLSWQNCAECSYHGSRVFNDSQRQATKDAGTISGLE--RSPNHQ*TDCCC 601
+ + ++ + + FNDSQRQATKDA TI+GL R N
Sbjct: 123 VLQKMKETAEAVLGHSVRDAVITVPAYFNDSQRQATKDAATIAGLNAIRIINEPTAAALA 182
Query: 602 DCLRS*QKGYWRTKCTYLWTSAAVLRRVHP*PSRMG-IFEVKSTAGDTHFG 751
L KG K ++ V G IFEVKSTAGDTH G
Sbjct: 183 YGL---DKGITDEKNILIFDLGGGTFDVSILSIAEGSIFEVKSTAGDTHLG 230
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 199 bits (486), Expect = 2e-51
Identities = 115/212 (54%), Positives = 143/212 (67%), Gaps = 8/212 (3%)
Frame = +3
Query: 81 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTE--RLIGDAAKNQVAMNP- 251
+GIDLGTTYSCVGV+++G+VEIIANDQGNR TPSYVAF+ + RLIGDAAKNQ+ +NP
Sbjct: 36 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINPE 95
Query: 252 NTQYSMPN-VSSDVSSKMLLCKPT*STGLSRYPVMEANLRSR*HIRVKT----KTFFPEE 416
NT + + D + K T + +P + ++ + VK K F PEE
Sbjct: 96 NTIFDAKRLIGRDYNDK------TVQADIKHWPFKVIDKSNKPSVEVKVGSDNKQFTPEE 149
Query: 417 VSSMVLTKMKETAEAYLGKTVQNAVITVPAYSMTLKDKPQKMQVPSLGLNVLRIINEPTA 596
VS+MVL KMKE AE+YLGK V+NAV+TVPAY + + K GLNV+RIINEPTA
Sbjct: 150 VSAMVLVKMKEIAESYLGKEVKNAVVTVPAYFNDAQRQATKDAGTIAGLNVVRIINEPTA 209
Query: 597 AAIAYGLDKKGTGERNVLIFGPRRRYFDVSIL 692
AAIAYGLDKK GERN+L+F FDVS+L
Sbjct: 210 AAIAYGLDKK-DGERNILVFDLGGGTFDVSML 240
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 199 bits (486), Expect = 2e-51
Identities = 115/212 (54%), Positives = 143/212 (67%), Gaps = 8/212 (3%)
Frame = +3
Query: 81 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTE--RLIGDAAKNQVAMNP- 251
+GIDLGTTYSCVGV+++G+VEIIANDQGNR TPSYVAF+ + RLIGDAAKNQ+ +NP
Sbjct: 36 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINPE 95
Query: 252 NTQYSMPN-VSSDVSSKMLLCKPT*STGLSRYPVMEANLRSR*HIRVKT----KTFFPEE 416
NT + + D + K T + +P + ++ + VK K F PEE
Sbjct: 96 NTIFDAKRLIGRDYNDK------TVQADIKHWPFKVIDKSNKPSVEVKVGSDNKQFTPEE 149
Query: 417 VSSMVLTKMKETAEAYLGKTVQNAVITVPAYSMTLKDKPQKMQVPSLGLNVLRIINEPTA 596
VS+MVL KMKE AE+YLGK V+NAV+TVPAY + + K GLNV+RIINEPTA
Sbjct: 150 VSAMVLVKMKEIAESYLGKEVKNAVVTVPAYFNDAQRQATKDAGTIAGLNVVRIINEPTA 209
Query: 597 AAIAYGLDKKGTGERNVLIFGPRRRYFDVSIL 692
AAIAYGLDKK GERN+L+F FDVS+L
Sbjct: 210 AAIAYGLDKK-DGERNILVFDLGGGTFDVSML 240
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 145 bits (351), Expect = 3e-35
Identities = 90/210 (42%), Positives = 122/210 (58%), Gaps = 2/210 (0%)
Frame = +3
Query: 69 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 245
K +GIDLGTT SCV + + ++I N +G RTTPS VAFT D ERL+G AK Q
Sbjct: 30 KGHVIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQAVT 89
Query: 246 NP-NTQYSMPNVSSDVSSKMLLCKPT*STGLSRYPVMEANLRSR*HIRVKTKTFFPEEVS 422
N NT ++ + + K + Y +++A+ + + K + P +V
Sbjct: 90 NSANTLFATKRLIGRRYEDPEVQK---DLKVVPYKIVKASNGDA-WVEAQGKVYSPSQVG 145
Query: 423 SMVLTKMKETAEAYLGKTVQNAVITVPAYSMTLKDKPQKMQVPSLGLNVLRIINEPTAAA 602
+ VL KMKETAE+YLG TV NAV+TVPAY + + K GLNVLR+INEPTAAA
Sbjct: 146 AFVLMKMKETAESYLGTTVNNAVVTVPAYFNDSQRQATKDAGQISGLNVLRVINEPTAAA 205
Query: 603 IAYGLDKKGTGERNVLIFGPRRRYFDVSIL 692
+AYGLD K G++ + ++ FDVSIL
Sbjct: 206 LAYGLD-KDAGDKIIAVYDLGGGTFDVSIL 234
>X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein.
Length = 487
Score = 142 bits (343), Expect = 3e-34
Identities = 89/210 (42%), Positives = 121/210 (57%), Gaps = 2/210 (0%)
Frame = +3
Query: 69 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 245
K +GIDLGTT SCV + + ++I N +G RTTPS VAFT D ERL+G AK Q
Sbjct: 30 KGHVIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQAVT 89
Query: 246 NP-NTQYSMPNVSSDVSSKMLLCKPT*STGLSRYPVMEANLRSR*HIRVKTKTFFPEEVS 422
N NT ++ + + K + Y +++A+ + + K + P +V
Sbjct: 90 NSANTLFATKRLIGRRYEDPEVQK---DLKVVPYKIVKASNGDA-WVEAQGKEYPPSQVG 145
Query: 423 SMVLTKMKETAEAYLGKTVQNAVITVPAYSMTLKDKPQKMQVPSLGLNVLRIINEPTAAA 602
+ VL KMKETAE+YLG TV N V+TVPAY + + K GLNVLR+INEPTAAA
Sbjct: 146 AFVLMKMKETAESYLGTTVNNPVVTVPAYFNDSQRQATKDAGQISGLNVLRVINEPTAAA 205
Query: 603 IAYGLDKKGTGERNVLIFGPRRRYFDVSIL 692
+AYGLD K G++ + ++ FDVSIL
Sbjct: 206 LAYGLD-KDAGDKIIAVYDLGGGTFDVSIL 234
>Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 122 bits (293), Expect = 4e-28
Identities = 78/210 (37%), Positives = 110/210 (52%), Gaps = 1/210 (0%)
Frame = +3
Query: 78 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF-TDTERLIGDAAKNQVAMNPN 254
++GIDLGTT+SCV +Q+G+V I+ N+ G RTTPS +A D + LIG AK+ + N
Sbjct: 2 SIGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAKDVIGKATN 61
Query: 255 TQYSMPNVSSDVSSKMLLCKPT*STGLSRYPVMEANLRSR*HIRVKTKTFFPEEVSSMVL 434
+ + + + +LL + H K F VSS++L
Sbjct: 62 SLFDVKRIIGRRYDDVLLQRDMPLWPFKVEKDDNGIPYLEIHKNEKPLKFSAVTVSSLIL 121
Query: 435 TKMKETAEAYLGKTVQNAVITVPAYSMTLKDKPQKMQVPSLGLNVLRIINEPTAAAIAYG 614
+K AE LG V++AVITVPAY + + + GL VLRI+NEPTAAAIAY
Sbjct: 122 RCLKYNAERKLGLEVKSAVITVPAYFNATQRRATEEAAEIAGLKVLRILNEPTAAAIAYS 181
Query: 615 LDKKGTGERNVLIFGPRRRYFDVSILNHRG 704
L + RN+LI+ FDV+ +N G
Sbjct: 182 LKGQRLSRRNILIYDLGGGTFDVAAVNVDG 211
Score = 48.8 bits (111), Expect = 4e-06
Identities = 32/106 (30%), Positives = 53/106 (50%), Gaps = 2/106 (1%)
Frame = +2
Query: 254 HTIFDAKRLIGRKFEDATVQADMKHWPFEV-SSDGGKPKIKVAYKGEDKNLFPRGSQFHG 430
+++FD KR+IGR+++D +Q DM WPF+V D G P +++ +K E F +
Sbjct: 61 NSLFDVKRIIGRRYDDVLLQRDMPLWPFKVEKDDNGIPYLEI-HKNEKPLKFSAVTVSSL 119
Query: 431 AYE-NEGNCRSLSWQNCAECSYHGSRVFNDSQRQATKDAGTISGLE 565
+ N FN +QR+AT++A I+GL+
Sbjct: 120 ILRCLKYNAERKLGLEVKSAVITVPAYFNATQRRATEEAAEIAGLK 165
>Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 122 bits (293), Expect = 4e-28
Identities = 78/210 (37%), Positives = 110/210 (52%), Gaps = 1/210 (0%)
Frame = +3
Query: 78 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF-TDTERLIGDAAKNQVAMNPN 254
++GIDLGTT+SCV +Q+G+V I+ N+ G RTTPS +A D + LIG AK+ + N
Sbjct: 2 SIGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAKDVIGKATN 61
Query: 255 TQYSMPNVSSDVSSKMLLCKPT*STGLSRYPVMEANLRSR*HIRVKTKTFFPEEVSSMVL 434
+ + + + +LL + H K F VSS++L
Sbjct: 62 SLFDVKRIIGRRYDDVLLQRDMPLWPFKVEKDDNGIPYLEIHKNEKPLKFSAVTVSSLIL 121
Query: 435 TKMKETAEAYLGKTVQNAVITVPAYSMTLKDKPQKMQVPSLGLNVLRIINEPTAAAIAYG 614
+K AE LG V++AVITVPAY + + + GL VLRI+NEPTAAAIAY
Sbjct: 122 RCLKYNAERKLGLEVKSAVITVPAYFNATQRRATEEAAEIAGLKVLRILNEPTAAAIAYS 181
Query: 615 LDKKGTGERNVLIFGPRRRYFDVSILNHRG 704
L + RN+LI+ FDV+ +N G
Sbjct: 182 LKGQRLSRRNILIYDLGGGTFDVAAVNVDG 211
Score = 48.8 bits (111), Expect = 4e-06
Identities = 32/106 (30%), Positives = 53/106 (50%), Gaps = 2/106 (1%)
Frame = +2
Query: 254 HTIFDAKRLIGRKFEDATVQADMKHWPFEV-SSDGGKPKIKVAYKGEDKNLFPRGSQFHG 430
+++FD KR+IGR+++D +Q DM WPF+V D G P +++ +K E F +
Sbjct: 61 NSLFDVKRIIGRRYDDVLLQRDMPLWPFKVEKDDNGIPYLEI-HKNEKPLKFSAVTVSSL 119
Query: 431 AYE-NEGNCRSLSWQNCAECSYHGSRVFNDSQRQATKDAGTISGLE 565
+ N FN +QR+AT++A I+GL+
Sbjct: 120 ILRCLKYNAERKLGLEVKSAVITVPAYFNATQRRATEEAAEIAGLK 165
>Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical
protein F54C9.2 protein.
Length = 450
Score = 90.6 bits (215), Expect = 1e-18
Identities = 75/231 (32%), Positives = 111/231 (48%), Gaps = 12/231 (5%)
Frame = +3
Query: 54 KYKMAKAPA--VGIDLGTTYSCVGVFQH--GKVEIIANDQGNRTTPSYVAFTDTER-LIG 218
KY + P GIDLGTTYS +G++ G+ I+ +D G ++ PS VAF LIG
Sbjct: 25 KYGLPPPPPKIAGIDLGTTYSSIGIYHAVTGETIILPDDLGKKSVPSVVAFLPNGTVLIG 84
Query: 219 DAAKNQVAMNPNTQYSMPNVSSDVSSKMLLCKPT*STGLSRYPVMEANLRSR*HIRVK-- 392
A Q NP ++ + + + RYP + NL S +
Sbjct: 85 TRATEQQEHNPKR--TIYDAKRFIGRNFEKNNKDFLSDQKRYP-FKINLDSEGKAFFEIP 141
Query: 393 ----TKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYSMTLKDKPQKMQVPSLG 560
TK +PEE+ S+++ +K A +LG T+ VI+ PA K + + +
Sbjct: 142 LDSGTKNVYPEEIGSLIIGYLKSAAAKHLGVTLGQVVISCPA-EFNEKQRNFTAKAAEIA 200
Query: 561 -LNVLRIINEPTAAAIAYGLDKKGTGERNVLIFGPRRRYFDVSILNHRGWV 710
+ V R+I+EPTAAA+AYGL KK G NV++ DVS+L +G V
Sbjct: 201 EMEVRRVISEPTAAALAYGLHKK-QGVENVVVVDLGGGTLDVSVLWLQGGV 250
Score = 48.0 bits (109), Expect = 7e-06
Identities = 35/111 (31%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Frame = +2
Query: 248 PQHTIFDAKRLIGRKFE--DATVQADMKHWPFEVSSDG-GKPKIKVAYKGEDKNLFPR-- 412
P+ TI+DAKR IGR FE + +D K +PF+++ D GK ++ KN++P
Sbjct: 95 PKRTIYDAKRFIGRNFEKNNKDFLSDQKRYPFKINLDSEGKAFFEIPLDSGTKNVYPEEI 154
Query: 413 GSQFHGAYENEGNCRSLSWQNCAECSYHGSRVFNDSQRQATKDAGTISGLE 565
GS G Y + L + FN+ QR T A I+ +E
Sbjct: 155 GSLIIG-YLKSAAAKHLG-VTLGQVVISCPAEFNEKQRNFTAKAAEIAEME 203
>L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical
protein C30C11.4 protein.
Length = 776
Score = 82.6 bits (195), Expect = 3e-16
Identities = 59/197 (29%), Positives = 98/197 (49%), Gaps = 9/197 (4%)
Frame = +3
Query: 81 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN-PNT 257
+G D+G +GV + G +E+I ND TP+ V+F +R +G AA+ V N NT
Sbjct: 4 LGFDIGNLNCYIGVARQGGIEVITNDYSLHATPACVSFGPKDRSMGVAARQAVTTNIKNT 63
Query: 258 QYSMPNV-----SSDVSSKMLLCKPT*STGLSRYPV-MEANLRSR*HIRVKTKTFFPEEV 419
+ ++ S V+ + + P L + ++ + H TF PE+V
Sbjct: 64 VINFKHLIGRKFSDPVAQRFIPFIPCKVVKLPNDDIGVQVSYLGEPH------TFTPEQV 117
Query: 420 SSMVLTKMKETAEAYLG--KTVQNAVITVPAYSMTLKDKPQKMQVPSLGLNVLRIINEPT 593
+ +LTK++ E+ L K V + V+ VP+Y ++ + + GLN LRI+NE T
Sbjct: 118 LAALLTKLRTIVESQLSDVKKVSDCVLAVPSYFTDVQRRAVLSAIQYAGLNSLRIVNETT 177
Query: 594 AAAIAYGLDKKGTGERN 644
A A+AYG+ K+ E +
Sbjct: 178 AIALAYGIYKQDLPEED 194
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +2
Query: 251 QHTIFDAKRLIGRKFEDATVQADMKHWPFE-VSSDGGKPKIKVAYKGEDKNLFP 409
++T+ + K LIGRKF D Q + P + V ++V+Y GE P
Sbjct: 61 KNTVINFKHLIGRKFSDPVAQRFIPFIPCKVVKLPNDDIGVQVSYLGEPHTFTP 114
>Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical
protein T14G8.3b protein.
Length = 905
Score = 72.1 bits (169), Expect = 4e-13
Identities = 49/189 (25%), Positives = 96/189 (50%), Gaps = 2/189 (1%)
Frame = +3
Query: 66 AKAPAVGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 242
A A+ IDLG+ + +G+ + G ++I+ N + R TP+ ++F + ER +AA +
Sbjct: 8 AALAAMSIDLGSQFIKIGLVKPGVPMDIVLNKESRRKTPNVISFKNDERFFAEAAAAMSS 67
Query: 243 MNPNTQYSMPNVSSDVSSKMLLCKPT*STGLSRYPVMEAN-LRSR*HIRVKTKTFFPEEV 419
+P + Y+ + S ++ K + E + +R K + + E +
Sbjct: 68 SHPQSSYNF--LLSMIARKEGDDAFVTFQKTFPFTAFEFDEVRKTVVFPYKEEKYNVETL 125
Query: 420 SSMVLTKMKETAEAYLGKTVQNAVITVPAYSMTLKDKPQKMQVPSLGLNVLRIINEPTAA 599
+M+L K+ EAY +TV++ VITVP + + + GLN+L+++N+ +AA
Sbjct: 126 LAMILWNAKKVTEAYADQTVKDVVITVPIFLNQAERRAIASAAEIAGLNLLQLLNDGSAA 185
Query: 600 AIAYGLDKK 626
A+ YG+ ++
Sbjct: 186 ALNYGVFRR 194
>Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical
protein T14G8.3a protein.
Length = 921
Score = 72.1 bits (169), Expect = 4e-13
Identities = 49/189 (25%), Positives = 96/189 (50%), Gaps = 2/189 (1%)
Frame = +3
Query: 66 AKAPAVGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 242
A A+ IDLG+ + +G+ + G ++I+ N + R TP+ ++F + ER +AA +
Sbjct: 24 AALAAMSIDLGSQFIKIGLVKPGVPMDIVLNKESRRKTPNVISFKNDERFFAEAAAAMSS 83
Query: 243 MNPNTQYSMPNVSSDVSSKMLLCKPT*STGLSRYPVMEAN-LRSR*HIRVKTKTFFPEEV 419
+P + Y+ + S ++ K + E + +R K + + E +
Sbjct: 84 SHPQSSYNF--LLSMIARKEGDDAFVTFQKTFPFTAFEFDEVRKTVVFPYKEEKYNVETL 141
Query: 420 SSMVLTKMKETAEAYLGKTVQNAVITVPAYSMTLKDKPQKMQVPSLGLNVLRIINEPTAA 599
+M+L K+ EAY +TV++ VITVP + + + GLN+L+++N+ +AA
Sbjct: 142 LAMILWNAKKVTEAYADQTVKDVVITVPIFLNQAERRAIASAAEIAGLNLLQLLNDGSAA 201
Query: 600 AIAYGLDKK 626
A+ YG+ ++
Sbjct: 202 ALNYGVFRR 210
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical
protein T24H7.2 protein.
Length = 925
Score = 64.5 bits (150), Expect = 8e-11
Identities = 53/195 (27%), Positives = 92/195 (47%), Gaps = 7/195 (3%)
Frame = +3
Query: 78 AVGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPN 254
A+ IDLGT + +G+ + G ++I N + R TP+ V D R DAA P+
Sbjct: 26 AMTIDLGTQFLKIGIVKPGIPMDIALNTESRRKTPNVVMIQDGHRTFADAAIGMQVRYPH 85
Query: 255 TQYSMPNVSSDVSSKMLLCKPT*STGLSRYPVMEAN----LRSR*HIRVKTKTFFPEEVS 422
+ N D+ K P+ R E + S + ++ +++ E ++
Sbjct: 86 LVHGQLN---DLVGKSTQ-HPSFELFKRRNTFFEVDDAPKNASSINFKLGGESYTVEALT 141
Query: 423 SMVLTKMKETAEAYL-GKTVQNAVITVPAYSMTLKDKPQKMQVPSLGLNVLRIINEPTAA 599
+M+L K+ E Y +++ VITVP Y + + GL VL++IN+ TAA
Sbjct: 142 AMILANAKKFTEEYAQAAEIKDVVITVPVYFTPAERLAVERAAQMAGLTVLQLINDGTAA 201
Query: 600 AIAYGL-DKKGTGER 641
A+++G+ +K GE+
Sbjct: 202 ALSHGIFRRKEIGEK 216
>Z68753-7|CAA92987.1| 240|Caenorhabditis elegans Hypothetical
protein ZC518.4 protein.
Length = 240
Score = 31.9 bits (69), Expect = 0.51
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +2
Query: 308 VQADMKHWPF-EVSSDGGKPKIKVAYK-GEDKNLFPRGSQFHGAYENEGNCRSL 463
++A WP + SDG KP + ++ G+ K LF S+ H ++++ G C S+
Sbjct: 104 LRAVTTRWPHPSIDSDGSKPCVNISCTGGQPKTLFSPSSK-HVSHKSPGQCLSI 156
>AF039044-13|AAG24128.2| 435|Caenorhabditis elegans Hypothetical
protein F48G7.12 protein.
Length = 435
Score = 31.9 bits (69), Expect = 0.51
Identities = 13/54 (24%), Positives = 30/54 (55%)
Frame = +3
Query: 156 DQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNTQYSMPNVSSDVSSKMLLCKP 317
D G+ ++V D +++IG+ + + NT+Y++ + SS+++L +P
Sbjct: 12 DIGDGLFQTHVQLEDVQKVIGEQMNTKARLGENTKYTVIGDGNGFSSRVILVEP 65
>Z81592-7|CAB63314.1| 436|Caenorhabditis elegans Hypothetical
protein T16G1.7 protein.
Length = 436
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/54 (22%), Positives = 28/54 (51%)
Frame = +3
Query: 156 DQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNTQYSMPNVSSDVSSKMLLCKP 317
D G+ ++V D + +IG+ + + NT+Y++ + S+++L +P
Sbjct: 12 DNGDGLFQTHVQLDDVQDVIGEQMNTEARLGKNTKYTVVGDGNGFMSRVILVEP 65
>Z81592-6|CAB04733.2| 431|Caenorhabditis elegans Hypothetical
protein T16G1.6 protein.
Length = 431
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +3
Query: 135 KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNTQYSMPNVSSDVSSKMLLCK 314
K+ I+ N +G T YV D + IG+ + + NT+Y++ + S+++L +
Sbjct: 5 KLTILDNGEGLFQTHVYVK--DVQEAIGEQMNTESRLGENTKYTVVGDGNGFMSRVVLVE 62
Query: 315 P 317
P
Sbjct: 63 P 63
>AC024813-3|AAK27881.1| 461|Caenorhabditis elegans Est (ever
shorter telomeres) homologprotein 1, isoform b protein.
Length = 461
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +2
Query: 359 KPKIKVAYKGEDKNLFPRGSQFHGAYENEGNCRSLSWQ-NCAECSYHGSRVFNDSQRQAT 535
KPK Y+GE + S++HG EN + L+ + + S +G+ + RQ++
Sbjct: 391 KPKEPRRYRGEHDDRDDDASEYHGTLENHMSSGRLAGRIQIVQRSQNGTEAGGNRNRQSS 450
Query: 536 KD 541
++
Sbjct: 451 EE 452
>AC024813-2|ABE73329.1| 1027|Caenorhabditis elegans Est (ever
shorter telomeres) homologprotein 1, isoform c protein.
Length = 1027
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +2
Query: 359 KPKIKVAYKGEDKNLFPRGSQFHGAYENEGNCRSLSWQ-NCAECSYHGSRVFNDSQRQAT 535
KPK Y+GE + S++HG EN + L+ + + S +G+ + RQ++
Sbjct: 234 KPKEPRRYRGEHDDRDDDASEYHGTLENHMSSGRLAGRIQIVQRSQNGTEAGGNRNRQSS 293
Query: 536 KD 541
++
Sbjct: 294 EE 295
>AC024813-1|AAK27880.3| 1241|Caenorhabditis elegans Est (ever
shorter telomeres) homologprotein 1, isoform a protein.
Length = 1241
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +2
Query: 359 KPKIKVAYKGEDKNLFPRGSQFHGAYENEGNCRSLSWQ-NCAECSYHGSRVFNDSQRQAT 535
KPK Y+GE + S++HG EN + L+ + + S +G+ + RQ++
Sbjct: 391 KPKEPRRYRGEHDDRDDDASEYHGTLENHMSSGRLAGRIQIVQRSQNGTEAGGNRNRQSS 450
Query: 536 KD 541
++
Sbjct: 451 EE 452
>Z80220-6|CAB02305.1| 282|Caenorhabditis elegans Hypothetical
protein T08G11.2 protein.
Length = 282
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 170 DHSVLCCVHRHRASHRRCRQEPGGDEPQH 256
D V+CCVH R S+ + Q+ D+ Q+
Sbjct: 23 DGEVVCCVHGRRCSYGKGNQDGKRDDNQY 51
>U39996-7|AAA81093.1| 1667|Caenorhabditis elegans Temporarily
assigned gene nameprotein 177 protein.
Length = 1667
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -3
Query: 370 DLRFASITGYLERPVLHVGLHSSIFELTSDETFGIEY 260
DLR +S L PVL +H+ FEL+S + I Y
Sbjct: 81 DLRSSSDKVLLRLPVLKQEVHNISFELSSSDVLAIMY 117
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,920,360
Number of Sequences: 27780
Number of extensions: 469743
Number of successful extensions: 1436
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1295
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1391
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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