Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30639
         (738 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    43   3e-06
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   2.3  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   2.3  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   4.0  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    22   5.2  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    22   6.9  
DQ494419-1|ABF55370.1|  127|Apis mellifera telomerase reverse tr...    21   9.1  
DQ494418-1|ABF55369.1|  110|Apis mellifera telomerase reverse tr...    21   9.1  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    21   9.1  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    21   9.1  

>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 42.7 bits (96), Expect = 3e-06
 Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
 Frame = +3

Query: 252 QVYLKGKYKASGKLLILPITGDGDTTIKLKNLRIQM-IYPFNLVKNSEGKDVIDLSSYRY 428
           QV     YK  GK+L+LP+ G G + I + +L+    IY     KN  G+  + +  +  
Sbjct: 124 QVDFVADYKIEGKVLLLPVRGAGKSNITMYDLKSHNDIYCEKYEKN--GETYLRIKKHAV 181

Query: 429 SYDVKDNAHFHMTNLFNGNKQLGDVM 506
            ++          NLF+GNK+LG+ M
Sbjct: 182 KFN-PAKVKLRFENLFDGNKELGEQM 206


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -3

Query: 103 LTP*TLNPVIHRLAAAPSIAL 41
           L+P TLN + H LA +P+I +
Sbjct: 11  LSPLTLNRITHILANSPAIII 31


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -3

Query: 103 LTP*TLNPVIHRLAAAPSIAL 41
           L+P TLN + H LA +P+I +
Sbjct: 49  LSPLTLNRITHILANSPAIII 69


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 7   CNLTDAVCLKTSA 45
           CN+ DA+C K +A
Sbjct: 638 CNIMDAICTKLTA 650


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = +3

Query: 396 KDVIDLSSYRYSYDVKDNAHFHMTNLFNGNKQLGDVMLL 512
           K +ID   +  + ++ +  H   T + N  KQLG V  L
Sbjct: 75  KAIIDSDRHSTTREIAEKLHVSHTCIENHLKQLGYVQKL 113


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 280 LQGNSSFCPSQVMGTQLLN 336
           + G +S CPSQ++   L N
Sbjct: 143 ISGETSVCPSQIVVFDLKN 161


>DQ494419-1|ABF55370.1|  127|Apis mellifera telomerase reverse
           transcriptase protein.
          Length = 127

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 435 DVKDNAHFHMTNLF 476
           D+ DN H H+ N+F
Sbjct: 50  DLFDNVHNHIQNIF 63


>DQ494418-1|ABF55369.1|  110|Apis mellifera telomerase reverse
           transcriptase protein.
          Length = 110

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 435 DVKDNAHFHMTNLF 476
           D+ DN H H+ N+F
Sbjct: 33  DLFDNVHNHIQNIF 46


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 7/37 (18%), Positives = 21/37 (56%)
 Frame = +3

Query: 375 LVKNSEGKDVIDLSSYRYSYDVKDNAHFHMTNLFNGN 485
           ++ +   K + + ++Y+Y+Y+  +  + +  N +N N
Sbjct: 314 IISSLSNKTIHNNNNYKYNYNNNNYNNNNYNNNYNNN 350


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +3

Query: 270 KYKASGKLLILPITGDGDTTI 332
           K+K   K    P +GDGDT I
Sbjct: 324 KWKKENKSKGTPGSGDGDTEI 344


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,458
Number of Sequences: 438
Number of extensions: 4530
Number of successful extensions: 18
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23023035
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)