Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30639
(738 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g64080.1 68414.m07259 expressed protein identical to hypothet... 30 1.8
At1g73280.1 68414.m08480 serine carboxypeptidase S10 family prot... 29 2.4
At2g22980.1 68415.m02731 serine carboxypeptidase S10 family prot... 29 3.2
At1g73290.1 68414.m08481 serine carboxypeptidase S10 family prot... 29 3.2
At5g49910.1 68418.m06180 heat shock protein 70 / HSP70 (HSC70-7)... 29 4.3
At5g23110.1 68418.m02703 zinc finger (C3HC4-type RING finger) fa... 29 4.3
At5g08310.1 68418.m00978 pentatricopeptide (PPR) repeat-containi... 28 5.6
At3g07540.1 68416.m00900 formin homology 2 domain-containing pro... 27 9.8
At3g06850.2 68416.m00813 branched chain alpha-keto acid dehydrog... 27 9.8
At3g06850.1 68416.m00812 branched chain alpha-keto acid dehydrog... 27 9.8
At2g23010.2 68415.m02745 serine carboxypeptidase S10 family prot... 27 9.8
At2g23010.1 68415.m02744 serine carboxypeptidase S10 family prot... 27 9.8
At2g05250.1 68415.m00553 DNAJ heat shock N-terminal domain-conta... 27 9.8
At2g05230.1 68415.m00551 DNAJ heat shock N-terminal domain-conta... 27 9.8
>At1g64080.1 68414.m07259 expressed protein identical to
hypothetical protein GB:AAF24565 GI:6692100 from
[Arabidopsis thaliana]
Length = 411
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/51 (31%), Positives = 30/51 (58%)
Frame = -2
Query: 218 KSTLNLSMIVSFIPVISASVSANFNPARSTFMAST*RGSNTLDPKSGNPSV 66
KST+ +++ V +P+IS N + S+ +S+ S++L ++GN SV
Sbjct: 207 KSTVTVNLKVEEVPIISLFSRENSSKNSSSSSSSSSSSSSSLKKQNGNESV 257
>At1g73280.1 68414.m08480 serine carboxypeptidase S10 family protein
similar to serine carboxypeptidase I precursor
(SP:P07519) [Hordeum vulgare]; glucose acyltransferase
GB:AAD01263 [Solanum berthaultii]; contains Pfam
profile: PF00450 Serine carboxypeptidase;
Length = 441
Score = 29.5 bits (63), Expect = 2.4
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3
Query: 426 YSYDVKDNAHFHMTNLFNGNKQL 494
Y+YD+K + +HM N NG + L
Sbjct: 337 YNYDIKSSIPYHMNNSINGYRSL 359
>At2g22980.1 68415.m02731 serine carboxypeptidase S10 family protein
similar to serine carboxypeptidase I precursor
(SP:P37890) from [Oryza sativa]
Length = 313
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +3
Query: 381 KNSEGKDV-IDLSSYRYSYDVKDNAHFHMTNLFNGNKQL 494
K S GK V + + Y+YD+K + +HM N +G + L
Sbjct: 193 KGSIGKWVQCNYKNISYNYDIKSSVAYHMKNSIDGYRSL 231
>At1g73290.1 68414.m08481 serine carboxypeptidase S10 family protein
similar to serine carboxypeptidase I precursor
(SP:P07519) [Hordeum vulgare]; glucose acyltransferase
GB:AAD01263 [Solanum berthaultii]; contains Pfam
profile: PF00450 Serine carboxypeptidase;
Length = 438
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = +3
Query: 324 TTIKLKNLRIQMIYPFNLVKNSEGKDVIDLSSYRYSYDVKDNAHFHMTNLFNGNKQL 494
TT + ++ ++ N K S G+ V Y++D+K + +HM N NG + L
Sbjct: 302 TTYWVNDVNVRKALQIN--KESIGEWVRCYFGIPYTHDIKSSVPYHMNNSINGYRSL 356
>At5g49910.1 68418.m06180 heat shock protein 70 / HSP70 (HSC70-7)
identical to heat shock protein 70 [Arabidopsis
thaliana] GI:6746592
Length = 718
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +1
Query: 19 DAVCLKTSAQLMVPQLTDGLPDLGSKVLDPLYVEAIKVDLAGLKLALTDAEITGMKDTI 195
DA+ K A +V Q L +LG K+ P+ E ++ L LK + +KDT+
Sbjct: 602 DAIDTKNQADSVVYQTEKQLKELGEKIPGPV-KEKVEAKLQELKEKIASGSTQEIKDTM 659
>At5g23110.1 68418.m02703 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 4706
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/60 (30%), Positives = 33/60 (55%)
Frame = +1
Query: 40 SAQLMVPQLTDGLPDLGSKVLDPLYVEAIKVDLAGLKLALTDAEITGMKDTIIDKLSVDL 219
+A+ + + + L +G K+L+ IKV+ + L ++DA TG+ ++I D S DL
Sbjct: 721 NAEKLPAAVRNVLEKIGGKILN----NNIKVEHSDLSSFVSDASYTGVLESIFDAASSDL 776
>At5g08310.1 68418.m00978 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 1280
Score = 28.3 bits (60), Expect = 5.6
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = +3
Query: 378 VKNSEGKDVIDLSSYRYSYDVKDNAHFHMTNLF 476
VK G ++DL R+ + D HFH ++
Sbjct: 1222 VKKIAGHSILDLDGTRHRFIAHDKTHFHSDKIY 1254
>At3g07540.1 68416.m00900 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 841
Score = 27.5 bits (58), Expect = 9.8
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +1
Query: 91 SKVLDPLYVEAIKVDLAGLKLALTDAEITGMKDTIIDKLSVDLAKKQIQV 240
SKVLDP + + V L LKL D ++D D L V+L + +V
Sbjct: 525 SKVLDPRKSQNVAVLLTTLKLTTNDV-CQALRDGHYDALGVELLESLARV 573
>At3g06850.2 68416.m00813 branched chain alpha-keto acid
dehydrogenase E2 subunit (din3) identical to branched
chain alpha-keto acid dehydrogenase E2 subunit (din3)
[Arabidopsis thaliana] GI:7021284
Length = 483
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = -1
Query: 606 YVLTVL*TISMGISRSGFPNSCVNAFQF*FIKVASHHL 493
++ T++ ++SM +++ F NSC NA I SH++
Sbjct: 308 FLPTLIKSLSMALTKYPFVNSCFNAESLEIILKGSHNI 345
>At3g06850.1 68416.m00812 branched chain alpha-keto acid
dehydrogenase E2 subunit (din3) identical to branched
chain alpha-keto acid dehydrogenase E2 subunit (din3)
[Arabidopsis thaliana] GI:7021284
Length = 483
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = -1
Query: 606 YVLTVL*TISMGISRSGFPNSCVNAFQF*FIKVASHHL 493
++ T++ ++SM +++ F NSC NA I SH++
Sbjct: 308 FLPTLIKSLSMALTKYPFVNSCFNAESLEIILKGSHNI 345
>At2g23010.2 68415.m02745 serine carboxypeptidase S10 family protein
similar to serine carboxypeptidase I precursor
(SP:P37890) [Oryza sativa]
Length = 437
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +3
Query: 381 KNSEGKDVIDLSSYRYSYDVKDNAHFHMTNLFNGNKQL 494
K S G+ + D Y D++ + +HM N NG + L
Sbjct: 318 KGSIGEWIRDHRGIPYKSDIRSSIPYHMNNSINGYRSL 355
>At2g23010.1 68415.m02744 serine carboxypeptidase S10 family protein
similar to serine carboxypeptidase I precursor
(SP:P37890) [Oryza sativa]
Length = 437
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +3
Query: 381 KNSEGKDVIDLSSYRYSYDVKDNAHFHMTNLFNGNKQL 494
K S G+ + D Y D++ + +HM N NG + L
Sbjct: 318 KGSIGEWIRDHRGIPYKSDIRSSIPYHMNNSINGYRSL 355
>At2g05250.1 68415.m00553 DNAJ heat shock N-terminal
domain-containing protein contains Pfam profile PF00226
DnaJ domain
Length = 706
Score = 27.5 bits (58), Expect = 9.8
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +1
Query: 70 DGLPDLGSKVLDPLYVEAIKVDLAGLKLALTDAEITGMK 186
DG+P L V + L V+ K+D+A L + TD E MK
Sbjct: 505 DGMPRLYCVVREVLSVQPFKIDIAYLS-SKTDIEFGSMK 542
>At2g05230.1 68415.m00551 DNAJ heat shock N-terminal
domain-containing protein contains Pfam profile PF00226
DnaJ domain
Length = 706
Score = 27.5 bits (58), Expect = 9.8
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +1
Query: 70 DGLPDLGSKVLDPLYVEAIKVDLAGLKLALTDAEITGMK 186
DG+P L V + L V+ K+D+A L + TD E MK
Sbjct: 505 DGMPRLYCVVREVLSVQPFKIDIAYLS-SKTDIEFGSMK 542
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,253,511
Number of Sequences: 28952
Number of extensions: 305789
Number of successful extensions: 699
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 684
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 699
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1624036432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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