Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30636
(762 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41023-4|AAA82343.2| 414|Caenorhabditis elegans Adaptin, mu/med... 153 2e-37
AF099001-7|AAP13777.1| 441|Caenorhabditis elegans Dumpy : short... 90 2e-18
L26290-1|AAA27981.1| 441|Caenorhabditis elegans clathrin-associ... 87 1e-17
Z83115-4|CAB05557.3| 422|Caenorhabditis elegans Hypothetical pr... 86 3e-17
L26291-1|AAA72418.1| 422|Caenorhabditis elegans protein ( Caeno... 86 3e-17
AF099001-8|AAP13778.1| 435|Caenorhabditis elegans Dumpy : short... 85 7e-17
AF003130-2|AAB54125.2| 426|Caenorhabditis elegans Adaptin, mu/m... 78 6e-15
U53340-2|AAA96207.1| 142|Caenorhabditis elegans Ap-2 small chai... 33 0.29
AF016440-4|AAB65902.1| 157|Caenorhabditis elegans Adaptin, smal... 32 0.51
Z11115-9|CAD30453.1| 889|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z11115-8|CAD30452.1| 888|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z11115-7|CAD30451.1| 899|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z11115-6|CAD30450.1| 894|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z11115-5|CAA77453.2| 883|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z11115-4|CAA77448.2| 905|Caenorhabditis elegans Hypothetical pr... 29 3.6
AF320904-1|AAG41437.1| 889|Caenorhabditis elegans UNC-32F vacuo... 29 3.6
AF320903-1|AAG41436.1| 888|Caenorhabditis elegans UNC-32E vacuo... 29 3.6
AF320902-1|AAG41435.1| 899|Caenorhabditis elegans UNC-32D vacuo... 29 3.6
AF320901-1|AAG41434.1| 894|Caenorhabditis elegans UNC-32C vacuo... 29 3.6
AF320900-1|AAG41433.1| 883|Caenorhabditis elegans UNC-32B neuro... 29 3.6
AF320899-1|AAG41432.1| 905|Caenorhabditis elegans UNC-32A vacuo... 29 3.6
Z83123-6|CAD45601.1| 327|Caenorhabditis elegans Hypothetical pr... 29 4.8
U50312-4|AAA92321.1| 542|Caenorhabditis elegans Temporarily ass... 29 4.8
U61235-1|AAB17540.1| 485|Caenorhabditis elegans ZK protein. 28 8.3
U41530-1|AAA83273.3| 636|Caenorhabditis elegans Hypothetical pr... 28 8.3
U21308-4|AAB93321.1| 484|Caenorhabditis elegans Warthog (hedgeh... 28 8.3
>U41023-4|AAA82343.2| 414|Caenorhabditis elegans Adaptin, mu/medium
chain (clathrinassociated complex) protein 3 protein.
Length = 414
Score = 153 bits (370), Expect = 2e-37
Identities = 75/159 (47%), Positives = 100/159 (62%)
Frame = +3
Query: 255 DVPPVLAAPHHYLISIHRGGVALVAVCKQEVAPLFVIEFLHRVVDTFQDYFSDCTETIIK 434
DVPP+++ PHHYLI++++ + LVAV E PL VIEFLHRV+ TF YF + +++ +K
Sbjct: 44 DVPPIISTPHHYLINVYQNNLFLVAVITVETPPLMVIEFLHRVIQTFTQYFDEFSDSSMK 103
Query: 435 ENYVVVYELLDEMLDNGFPLATESKY*KN*LNHQIF*EQLPILLQENQMYPLHFRLDSCQ 614
EN V+V+ELLDEMLDNGFPL TE ++ + F + +
Sbjct: 104 ENCVMVFELLDEMLDNGFPLVTEMNILQDLIKPPNFLRNIANQVTGRTNLSETLPTGQLS 163
Query: 615 MYLGRRSGVKYANNEAYFDVVEEVDAIIDKSGATVNAGI 731
RR GVKY NNEAYFDV+EE+D I+DK G+TV A I
Sbjct: 164 NIPWRRQGVKYTNNEAYFDVIEEIDVIVDKQGSTVFAEI 202
Score = 68.5 bits (160), Expect = 5e-12
Identities = 28/41 (68%), Positives = 36/41 (87%)
Frame = +2
Query: 509 ILKELIKPPNILRTIANTVTGKSNVSSTLPSGQLSNVPWEK 631
IL++LIKPPN LR IAN VTG++N+S TLP+GQLSN+PW +
Sbjct: 129 ILQDLIKPPNFLRNIANQVTGRTNLSETLPTGQLSNIPWRR 169
Score = 61.7 bits (143), Expect = 6e-10
Identities = 24/39 (61%), Positives = 32/39 (82%)
Frame = +1
Query: 133 MIHSLFIINPSGDVFLEKHWRSVIPRSVCDYYLEAQRAS 249
M++SLF +N SGDV LEKHW+SVI RS+CDY+ + Q+ S
Sbjct: 1 MLNSLFFVNSSGDVLLEKHWKSVIHRSICDYFFDIQKKS 39
>AF099001-7|AAP13777.1| 441|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 23, isoform a protein.
Length = 441
Score = 89.8 bits (213), Expect = 2e-18
Identities = 51/158 (32%), Positives = 82/158 (51%), Gaps = 2/158 (1%)
Frame = +3
Query: 264 PVLAAPHHYLISIHRGGVALVAVCKQEVAPLFVIEFLHRVVDTFQDYFSDCTETIIKENY 443
PV + RG V + AV +Q V V EFL R DT Q YF E +K N+
Sbjct: 46 PVTNMARTSFFHVKRGNVWICAVTRQNVNAAMVFEFLKRFADTMQSYFGKLNEENVKNNF 105
Query: 444 VVVYELLDEMLDNGFPLATESKY*KN*LNHQ-IF*EQLPILLQENQMYPLHFRLDSCQMY 620
V++YELLDE+LD G+P T+ K + Q + P+ + + + + ++
Sbjct: 106 VLIYELLDEILDFGYPQNTDPGVLKTFITQQGVRTADAPVPVTKEEQSQITSQVTG---Q 162
Query: 621 LG-RRSGVKYANNEAYFDVVEEVDAIIDKSGATVNAGI 731
+G RR G+KY NE + DV+E V+ ++++ G ++A +
Sbjct: 163 IGWRREGIKYRRNELFLDVIEYVNLLMNQQGQVLSAHV 200
>L26290-1|AAA27981.1| 441|Caenorhabditis elegans
clathrin-associated protein homologueprotein.
Length = 441
Score = 87.4 bits (207), Expect = 1e-17
Identities = 50/158 (31%), Positives = 81/158 (51%), Gaps = 2/158 (1%)
Frame = +3
Query: 264 PVLAAPHHYLISIHRGGVALVAVCKQEVAPLFVIEFLHRVVDTFQDYFSDCTETIIKENY 443
PV + RG V + AV +Q V V FL R DT Q YF E +K N+
Sbjct: 46 PVTNMARTSFFHVKRGNVWICAVTRQNVNAAMVFAFLKRFADTMQSYFGKLNEENVKNNF 105
Query: 444 VVVYELLDEMLDNGFPLATESKY*KN*LNHQ-IF*EQLPILLQENQMYPLHFRLDSCQMY 620
V++YELLDE+LD G+P T+ K + Q + P+ + + + + ++
Sbjct: 106 VLIYELLDEILDFGYPQNTDPGVLKTFITQQGVRTADAPVPVTKEEQSQITSQVTG---Q 162
Query: 621 LG-RRSGVKYANNEAYFDVVEEVDAIIDKSGATVNAGI 731
+G RR G+KY NE + DV+E V+ ++++ G ++A +
Sbjct: 163 IGWRREGIKYRRNELFLDVIEYVNLLMNQQGQVLSAHV 200
>Z83115-4|CAB05557.3| 422|Caenorhabditis elegans Hypothetical
protein K11D2.3a protein.
Length = 422
Score = 85.8 bits (203), Expect = 3e-17
Identities = 48/156 (30%), Positives = 76/156 (48%)
Frame = +3
Query: 264 PVLAAPHHYLISIHRGGVALVAVCKQEVAPLFVIEFLHRVVDTFQDYFSDCTETIIKENY 443
PVL + I + LV+ C+ V ++ FL++ V+ F +YF D E +++N+
Sbjct: 48 PVLTYQDTNFVFIKHTNIYLVSACRSNVNVTMILSFLYKCVEVFSEYFKDVEEESVRDNF 107
Query: 444 VVVYELLDEMLDNGFPLATESKY*KN*LNHQIF*EQLPILLQENQMYPLHFRLDSCQMYL 623
VV+YELLDEM+D GFP TES+ L I E ++ +
Sbjct: 108 VVIYELLDEMMDFGFPQTTESRI----LQEYITQEGQKLISAPRPPMAV------TNAVS 157
Query: 624 GRRSGVKYANNEAYFDVVEEVDAIIDKSGATVNAGI 731
R G+KY NE + DV+E V+ + +G + + I
Sbjct: 158 WRSEGIKYRKNEVFLDVIESVNMLASANGTVLQSEI 193
>L26291-1|AAA72418.1| 422|Caenorhabditis elegans protein (
Caenorhabditis elegans(unc-101) mRNA, complete cds. ).
Length = 422
Score = 85.8 bits (203), Expect = 3e-17
Identities = 48/156 (30%), Positives = 76/156 (48%)
Frame = +3
Query: 264 PVLAAPHHYLISIHRGGVALVAVCKQEVAPLFVIEFLHRVVDTFQDYFSDCTETIIKENY 443
PVL + I + LV+ C+ V ++ FL++ V+ F +YF D E +++N+
Sbjct: 48 PVLTYQDTNFVFIKHTNIYLVSACRSNVNVTMILSFLYKCVEVFSEYFKDVEEESVRDNF 107
Query: 444 VVVYELLDEMLDNGFPLATESKY*KN*LNHQIF*EQLPILLQENQMYPLHFRLDSCQMYL 623
VV+YELLDEM+D GFP TES+ L I E ++ +
Sbjct: 108 VVIYELLDEMMDFGFPQTTESRI----LQEYITQEGQKLISAPRPPMAV------TNAVS 157
Query: 624 GRRSGVKYANNEAYFDVVEEVDAIIDKSGATVNAGI 731
R G+KY NE + DV+E V+ + +G + + I
Sbjct: 158 WRSEGIKYRKNEVFLDVIESVNMLASANGTVLQSEI 193
>AF099001-8|AAP13778.1| 435|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 23, isoform b protein.
Length = 435
Score = 84.6 bits (200), Expect = 7e-17
Identities = 51/156 (32%), Positives = 75/156 (48%)
Frame = +3
Query: 264 PVLAAPHHYLISIHRGGVALVAVCKQEVAPLFVIEFLHRVVDTFQDYFSDCTETIIKENY 443
PV + RG V + AV +Q V V EFL R DT Q YF E +K N+
Sbjct: 46 PVTNMARTSFFHVKRGNVWICAVTRQNVNAAMVFEFLKRFADTMQSYFGKLNEENVKNNF 105
Query: 444 VVVYELLDEMLDNGFPLATESKY*KN*LNHQIF*EQLPILLQENQMYPLHFRLDSCQMYL 623
V++YELLDE+LD G+P T+ K + Q + +E Q
Sbjct: 106 VLIYELLDEILDFGYPQNTDPGVLKTFITQQ----GVRTATKEEQS---QITSQVTGQIG 158
Query: 624 GRRSGVKYANNEAYFDVVEEVDAIIDKSGATVNAGI 731
RR G+KY NE + DV+E V+ ++++ G ++A +
Sbjct: 159 WRREGIKYRRNELFLDVIEYVNLLMNQQGQVLSAHV 194
>AF003130-2|AAB54125.2| 426|Caenorhabditis elegans Adaptin,
mu/medium chain (clathrinassociated complex) protein 1
protein.
Length = 426
Score = 78.2 bits (184), Expect = 6e-15
Identities = 44/139 (31%), Positives = 72/139 (51%)
Frame = +3
Query: 315 VALVAVCKQEVAPLFVIEFLHRVVDTFQDYFSDCTETIIKENYVVVYELLDEMLDNGFPL 494
V LV + K+ + V+ L+++V+ F +YF E +++N+V++YEL DEMLD G+P
Sbjct: 65 VYLVTISKKNTNVILVLSALYKIVEVFCEYFKTLEEEAVRDNFVIIYELFDEMLDFGYPQ 124
Query: 495 ATESKY*KN*LNHQIF*EQLPILLQENQMYPLHFRLDSCQMYLGRRSGVKYANNEAYFDV 674
TESK Q F I Q N++ + + R G+KY NE + DV
Sbjct: 125 TTESKI------LQEF-----ITQQGNRLETVRPPMAVTNAVSWRSEGIKYRKNEVFLDV 173
Query: 675 VEEVDAIIDKSGATVNAGI 731
+E V+ + + G + + I
Sbjct: 174 IESVNMLANAQGTVLRSEI 192
>U53340-2|AAA96207.1| 142|Caenorhabditis elegans Ap-2 small chain
(clathrin associatedcomplex) protein 2 protein.
Length = 142
Score = 32.7 bits (71), Expect = 0.29
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +3
Query: 354 LFVIEFLHRVVDTFQDYFSDCTETIIKENYVVVYELLDEM 473
L+ +E +H V+ +YF + E + N+ VY ++DEM
Sbjct: 78 LYYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEM 117
>AF016440-4|AAB65902.1| 157|Caenorhabditis elegans Adaptin, small
chain (clathrinassociated complex) protein 1 protein.
Length = 157
Score = 31.9 bits (69), Expect = 0.51
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = +3
Query: 354 LFVIEFLHRVVDTFQDYFSDCTETIIKENYVVVYELLDEMLDNGFPLATESK 509
L +E +HR V+ YF E I N+ Y +LDE L G T K
Sbjct: 78 LITLEVIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLLAGEIQETSKK 129
>Z11115-9|CAD30453.1| 889|Caenorhabditis elegans Hypothetical
protein ZK637.8f protein.
Length = 889
Score = 29.1 bits (62), Expect = 3.6
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 190 WRSVIPRSVCDYYLEAQRAS 249
W++ IP SV DYYL+ ++ S
Sbjct: 499 WQNTIPESVIDYYLDDEKRS 518
>Z11115-8|CAD30452.1| 888|Caenorhabditis elegans Hypothetical
protein ZK637.8e protein.
Length = 888
Score = 29.1 bits (62), Expect = 3.6
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 190 WRSVIPRSVCDYYLEAQRAS 249
W++ IP SV DYYL+ ++ S
Sbjct: 504 WQNTIPESVIDYYLDDEKRS 523
>Z11115-7|CAD30451.1| 899|Caenorhabditis elegans Hypothetical
protein ZK637.8d protein.
Length = 899
Score = 29.1 bits (62), Expect = 3.6
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 190 WRSVIPRSVCDYYLEAQRAS 249
W++ IP SV DYYL+ ++ S
Sbjct: 515 WQNTIPESVIDYYLDDEKRS 534
>Z11115-6|CAD30450.1| 894|Caenorhabditis elegans Hypothetical
protein ZK637.8c protein.
Length = 894
Score = 29.1 bits (62), Expect = 3.6
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 190 WRSVIPRSVCDYYLEAQRAS 249
W++ IP SV DYYL+ ++ S
Sbjct: 504 WQNTIPESVIDYYLDDEKRS 523
>Z11115-5|CAA77453.2| 883|Caenorhabditis elegans Hypothetical
protein ZK637.8b protein.
Length = 883
Score = 29.1 bits (62), Expect = 3.6
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 190 WRSVIPRSVCDYYLEAQRAS 249
W++ IP SV DYYL+ ++ S
Sbjct: 499 WQNTIPESVIDYYLDDEKRS 518
>Z11115-4|CAA77448.2| 905|Caenorhabditis elegans Hypothetical
protein ZK637.8a protein.
Length = 905
Score = 29.1 bits (62), Expect = 3.6
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 190 WRSVIPRSVCDYYLEAQRAS 249
W++ IP SV DYYL+ ++ S
Sbjct: 515 WQNTIPESVIDYYLDDEKRS 534
>AF320904-1|AAG41437.1| 889|Caenorhabditis elegans UNC-32F vacuolar
proton pump 101kDa subunit variant protein.
Length = 889
Score = 29.1 bits (62), Expect = 3.6
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 190 WRSVIPRSVCDYYLEAQRAS 249
W++ IP SV DYYL+ ++ S
Sbjct: 499 WQNTIPESVIDYYLDDEKRS 518
>AF320903-1|AAG41436.1| 888|Caenorhabditis elegans UNC-32E vacuolar
proton pump 101kDa subunit variant protein.
Length = 888
Score = 29.1 bits (62), Expect = 3.6
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 190 WRSVIPRSVCDYYLEAQRAS 249
W++ IP SV DYYL+ ++ S
Sbjct: 504 WQNTIPESVIDYYLDDEKRS 523
>AF320902-1|AAG41435.1| 899|Caenorhabditis elegans UNC-32D vacuolar
proton pump 103kDa subunit variant protein.
Length = 899
Score = 29.1 bits (62), Expect = 3.6
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 190 WRSVIPRSVCDYYLEAQRAS 249
W++ IP SV DYYL+ ++ S
Sbjct: 515 WQNTIPESVIDYYLDDEKRS 534
>AF320901-1|AAG41434.1| 894|Caenorhabditis elegans UNC-32C vacuolar
proton pump 102kDa subunit variant protein.
Length = 894
Score = 29.1 bits (62), Expect = 3.6
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 190 WRSVIPRSVCDYYLEAQRAS 249
W++ IP SV DYYL+ ++ S
Sbjct: 504 WQNTIPESVIDYYLDDEKRS 523
>AF320900-1|AAG41433.1| 883|Caenorhabditis elegans UNC-32B neuronal
vacuolar protonpump 100 kDa subunit variant protein.
Length = 883
Score = 29.1 bits (62), Expect = 3.6
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 190 WRSVIPRSVCDYYLEAQRAS 249
W++ IP SV DYYL+ ++ S
Sbjct: 499 WQNTIPESVIDYYLDDEKRS 518
>AF320899-1|AAG41432.1| 905|Caenorhabditis elegans UNC-32A vacuolar
proton pump 103kDa subunit variant protein.
Length = 905
Score = 29.1 bits (62), Expect = 3.6
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 190 WRSVIPRSVCDYYLEAQRAS 249
W++ IP SV DYYL+ ++ S
Sbjct: 515 WQNTIPESVIDYYLDDEKRS 534
>Z83123-6|CAD45601.1| 327|Caenorhabditis elegans Hypothetical
protein T04A11.12 protein.
Length = 327
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -2
Query: 725 GIYGSSTFVNNGIDFFNYIKVSFIVSILY 639
GI+G+STF+N F+ + +V ILY
Sbjct: 14 GIHGNSTFINFEFSFYTLPMLFLLVPILY 42
>U50312-4|AAA92321.1| 542|Caenorhabditis elegans Temporarily
assigned gene nameprotein 38 protein.
Length = 542
Score = 28.7 bits (61), Expect = 4.8
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = -3
Query: 283 CGAANTGGTS*VMLSVLPNNNHILNEGSHFS 191
CG +TGG+ ++L+ L + N +L G ++
Sbjct: 191 CGTMSTGGSISILLACLAHRNRLLKRGEKYT 221
>U61235-1|AAB17540.1| 485|Caenorhabditis elegans ZK protein.
Length = 485
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +3
Query: 651 NNEAYFDVVEEVDAIIDKSGATVNAGI 731
+NE FD+ ++ I+DK G T +G+
Sbjct: 202 SNEVSFDIQRDIGRILDKVGETAASGV 228
>U41530-1|AAA83273.3| 636|Caenorhabditis elegans Hypothetical
protein SSSD1.1 protein.
Length = 636
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +3
Query: 231 GSTESIT*DVPPVLAAPHHYLISIHRGGVALVAVCKQEVAP 353
G + + +VPPV+ +P I + G L+ CK E AP
Sbjct: 29 GLSAKLVVNVPPVIISPSKNAIIHKKVGADLIFECKAEGAP 69
>U21308-4|AAB93321.1| 484|Caenorhabditis elegans Warthog
(hedgehog-like family)protein 1 protein.
Length = 484
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +3
Query: 651 NNEAYFDVVEEVDAIIDKSGATVNAGI 731
+NE FD+ ++ I+DK G T +G+
Sbjct: 201 SNEVSFDIQRDIGRILDKVGETAASGV 227
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,729,512
Number of Sequences: 27780
Number of extensions: 379955
Number of successful extensions: 977
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 923
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 974
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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