Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30636
         (762 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    23   4.1  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    23   4.1  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    23   4.1  
DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.              22   5.4  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   7.1  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   7.1  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    22   7.1  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   7.1  

>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +1

Query: 289 TSYQFIEEELHLLLSVSRK 345
           T YQFIEE   + LS  R+
Sbjct: 306 TVYQFIEERQRISLSKERR 324


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +1

Query: 289 TSYQFIEEELHLLLSVSRK 345
           T YQFIEE   + LS  R+
Sbjct: 306 TVYQFIEERQRISLSKERR 324


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +1

Query: 289 TSYQFIEEELHLLLSVSRK 345
           T YQFIEE   + LS  R+
Sbjct: 306 TVYQFIEERQRISLSKERR 324


>DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.
          Length = 145

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 547 NNCQYCYRKIKC 582
           +NC+Y YR  KC
Sbjct: 122 DNCEYAYRFNKC 133


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = -1

Query: 516  FNIYFPWPVGSHYLTFHPIIHTPPHN 439
            ++ Y     G   +T   I+H PPH+
Sbjct: 1344 YSCYVENTFGHDTVTHQLIVHAPPHS 1369


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = +1

Query: 196 SVIPRSVCDYYLEAQRASPKMYHRCWLLHIITSYQFIEEEL 318
           SVI R+V   YL+ Q       H C +   +    ++E EL
Sbjct: 319 SVIKRTVVSSYLQLQDLLGDFEHPCVMDCKVGVRTYLESEL 359


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = +1

Query: 196 SVIPRSVCDYYLEAQRASPKMYHRCWLLHIITSYQFIEEEL 318
           SVI R+V   YL+ Q       H C +   +    ++E EL
Sbjct: 234 SVIKRTVVSSYLQLQDLLGDFEHPCVMDCKVGVRTYLESEL 274


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = +1

Query: 196 SVIPRSVCDYYLEAQRASPKMYHRCWLLHIITSYQFIEEEL 318
           SVI R+V   YL+ Q       H C +   +    ++E EL
Sbjct: 553 SVIKRTVVSSYLQLQDLLGDFEHPCVMDCKVGVRTYLESEL 593


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 213,203
Number of Sequences: 438
Number of extensions: 4852
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23789892
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)