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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30635
         (684 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2; Endopterygot...   161   1e-38
UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryo...   129   5e-29
UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryo...   123   4e-27
UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;...   110   3e-23
UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal ...    99   5e-20
UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974, w...    98   2e-19
UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; ...    94   2e-18
UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; E...    93   8e-18
UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Scleroti...    89   7e-17
UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL...    88   2e-16
UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium c...    87   3e-16
UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Ol...    85   1e-15
UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal ...    85   2e-15
UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lambli...    82   1e-14
UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, pu...    75   2e-12
UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3; Trich...    74   3e-12
UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9; Euryarc...    74   3e-12
UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n...    73   7e-12
UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1; Encephal...    73   9e-12
UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13; Euryar...    66   6e-10
UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1; L...    64   2e-09
UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2; Euryarc...    63   5e-09
UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3; Archaea...    62   1e-08
UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular org...    60   4e-08
UniRef50_UPI0000DA3D75 Cluster: PREDICTED: similar to ribosomal ...    59   9e-08
UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2; Cryptomo...    58   2e-07
UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4; Thermop...    58   2e-07
UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9; Archaea...    58   2e-07
UniRef50_P60847 Cluster: 50S ribosomal protein L4P; n=1; Nanoarc...    56   8e-07
UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8; Archaea...    54   4e-06
UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia b...    49   9e-05
UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1, pu...    40   0.056
UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarc...    38   0.30 
UniRef50_Q4TDL2 Cluster: Chromosome undetermined SCAF6181, whole...    37   0.40 
UniRef50_Q23TC4 Cluster: Putative uncharacterized protein; n=1; ...    35   1.6  
UniRef50_Q7KKH3 Cluster: Protein SDA1 homolog; n=4; Coelomata|Re...    35   1.6  
UniRef50_A5K648 Cluster: CW-type zinc finger domain-containing p...    34   3.7  
UniRef50_Q28ZB7 Cluster: GA20803-PA; n=1; Drosophila pseudoobscu...    33   4.9  
UniRef50_Q23DJ6 Cluster: Putative uncharacterized protein; n=1; ...    33   6.5  
UniRef50_A4QS15 Cluster: Putative uncharacterized protein; n=2; ...    33   6.5  

>UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2;
           Endopterygota|Rep: Ribosomal protein 23 - Lonomia
           obliqua (Moth)
          Length = 274

 Score =  161 bits (392), Expect = 1e-38
 Identities = 76/103 (73%), Positives = 90/103 (87%)
 Frame = +3

Query: 255 AFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRK 434
           AF RLD +FGSWKTPSK+KKNFNLPQPKMANTDL+RLLKS+EIR+VLRAP KRV+RATRK
Sbjct: 121 AFERLDAIFGSWKTPSKEKKNFNLPQPKMANTDLSRLLKSEEIRRVLRAPIKRVVRATRK 180

Query: 435 LNPLTNNKAMLKLNPYAAVLKEESYLELRRRKNLKGFLLMPRR 563
           LNPLTN KAMLKLNPYAAVLK+++ L+  +RKN +   +  +R
Sbjct: 181 LNPLTNTKAMLKLNPYAAVLKKKAVLDQVKRKNKRALEVAEKR 223



 Score =  144 bits (350), Expect = 1e-33
 Identities = 71/128 (55%), Positives = 87/128 (67%)
 Frame = +1

Query: 1   LRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXX 180
           LRR+KAWSD+LKVYKSQRLRAGKGKMRNRRR+ RKGPLII+NKDQGLTR+FRNIPGV+  
Sbjct: 36  LRRIKAWSDVLKVYKSQRLRAGKGKMRNRRRLHRKGPLIIYNKDQGLTRSFRNIPGVDMV 95

Query: 181 XXXXXXXXXXAPGGHLGRFVIWTQSHSAGLTPYSGHGRHHQNKRRTSTCPNRRWPTLTSH 360
                     APGGH+GRF+IWTQS    L    G  +    +++    P    P + + 
Sbjct: 96  NVNKLNLLHLAPGGHVGRFMIWTQSAFERLDAIFGSWKTPSKEKKNFNLPQ---PKMANT 152

Query: 361 VFSSLMRS 384
             S L++S
Sbjct: 153 DLSRLLKS 160


>UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96;
           Eukaryota|Rep: 60S ribosomal protein L4 - Drosophila
           melanogaster (Fruit fly)
          Length = 401

 Score =  129 bits (312), Expect = 5e-29
 Identities = 60/91 (65%), Positives = 72/91 (79%)
 Frame = +3

Query: 255 AFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRK 434
           AF RL+ LFG+WK PS  KK +NLPQPKMANTDL+RLLKS+EIRKVLR P KRV R+ R+
Sbjct: 259 AFARLNDLFGTWKKPSTLKKGYNLPQPKMANTDLSRLLKSEEIRKVLRDPRKRVFRSVRR 318

Query: 435 LNPLTNNKAMLKLNPYAAVLKEESYLELRRR 527
           LNPLTN + ++KLNPYA VLK  + L   +R
Sbjct: 319 LNPLTNVRQLIKLNPYAEVLKRRAALAAEKR 349



 Score =  127 bits (306), Expect = 3e-28
 Identities = 62/128 (48%), Positives = 82/128 (64%)
 Frame = +1

Query: 1   LRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXX 180
           LRRLK W+DI KVYKSQR RAG+G MR+RRRI R+GPL++++KD+GL +AFRNIPG+E  
Sbjct: 174 LRRLKIWADIQKVYKSQRFRAGRGTMRDRRRIARRGPLVVYDKDEGLRKAFRNIPGIETI 233

Query: 181 XXXXXXXXXXAPGGHLGRFVIWTQSHSAGLTPYSGHGRHHQNKRRTSTCPNRRWPTLTSH 360
                     APGGH+GRFVIWT+S  A L    G  +     ++    P    P + + 
Sbjct: 234 NVDKLNLLKLAPGGHVGRFVIWTESAFARLNDLFGTWKKPSTLKKGYNLPQ---PKMANT 290

Query: 361 VFSSLMRS 384
             S L++S
Sbjct: 291 DLSRLLKS 298


>UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70;
           Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens
           (Human)
          Length = 427

 Score =  123 bits (297), Expect = 4e-27
 Identities = 54/85 (63%), Positives = 66/85 (77%)
 Frame = +1

Query: 1   LRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXX 180
           L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+GP II+N+D G+ +AFRNIPG+   
Sbjct: 171 LKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLL 230

Query: 181 XXXXXXXXXXAPGGHLGRFVIWTQS 255
                     APGGH+GRF IWT+S
Sbjct: 231 NVSKLNILKLAPGGHVGRFCIWTES 255



 Score =  101 bits (242), Expect = 2e-20
 Identities = 46/95 (48%), Positives = 63/95 (66%)
 Frame = +3

Query: 255 AFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRK 434
           AF +LD L+G+W+  +  K N+NLP  KM NTDL+R+LKS EI++ LRAP K++ R   K
Sbjct: 256 AFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLK 315

Query: 435 LNPLTNNKAMLKLNPYAAVLKEESYLELRRRKNLK 539
            NPL N + MLKLNPYA  ++  + L   R   L+
Sbjct: 316 KNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLR 350


>UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;
           Ostreococcus tauri|Rep: Ribosomal protein
           RPL1/RPL2/RL4L4 - Ostreococcus tauri
          Length = 404

 Score =  110 bits (265), Expect = 3e-23
 Identities = 48/85 (56%), Positives = 66/85 (77%)
 Frame = +1

Query: 1   LRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXX 180
           L++L A++DI KV  S+ +R+GKGKMRNRR +QR+GPL+++++D G+TRAFRNIPGVE  
Sbjct: 174 LKQLGAYADIEKVKASRNVRSGKGKMRNRRYVQRRGPLVVYSEDNGVTRAFRNIPGVELC 233

Query: 181 XXXXXXXXXXAPGGHLGRFVIWTQS 255
                     APGGH+GRF+IWT+S
Sbjct: 234 SVDRLGLLTLAPGGHVGRFIIWTKS 258



 Score = 77.4 bits (182), Expect = 3e-13
 Identities = 43/84 (51%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
 Frame = +3

Query: 255 AFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIR--AT 428
           AF +LD +FG+  + S  KK +  P   MA TDLTRL+ SDEI+  L AP    IR  A 
Sbjct: 259 AFEKLDSIFGTSTSKSASKKGWKPPTNIMAQTDLTRLINSDEIQSALNAPKLGAIRAHAP 318

Query: 429 RKLNPLTNNKAMLKLNPYAAVLKE 500
            K NPL N  AM KLNPYA V +E
Sbjct: 319 LKRNPLKNKSAMDKLNPYAKVARE 342


>UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal
           protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
           similar to ribosomal protein L4 - Canis familiaris
          Length = 253

 Score =   99 bits (238), Expect = 5e-20
 Identities = 53/110 (48%), Positives = 70/110 (63%), Gaps = 1/110 (0%)
 Frame = +3

Query: 213 SGRPSWT-FRHLDSVAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRK 389
           S RPS T    L  +AF +LD L+G+W   +  K N+NLP  KM NTDL+R+LKS EI++
Sbjct: 80  SSRPSETSLELLYLIAFCKLDDLYGTWHKAASLKSNYNLPMHKMLNTDLSRILKSPEIQR 139

Query: 390 VLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKEESYLELRRRKNLK 539
            L+AP K++ R   K NPL N   MLKLNPYA  ++  +   LR+ KN K
Sbjct: 140 ALQAPRKKIHRRVLKKNPLKNLGIMLKLNPYAKTMRRNTI--LRQAKNHK 187



 Score = 52.0 bits (119), Expect = 1e-05
 Identities = 22/28 (78%), Positives = 26/28 (92%)
 Frame = +1

Query: 1   LRRLKAWSDILKVYKSQRLRAGKGKMRN 84
           L++LKAW+DI KVY SQR+RAGKGKMRN
Sbjct: 34  LKKLKAWNDIKKVYASQRMRAGKGKMRN 61


>UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome undetermined scaffold_974, whole genome
           shotgun sequence - Vitis vinifera (Grape)
          Length = 386

 Score = 98.3 bits (234), Expect = 2e-19
 Identities = 51/116 (43%), Positives = 67/116 (57%), Gaps = 2/116 (1%)
 Frame = +1

Query: 1   LRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQG-LTRAFRNIPGVEX 177
           L++  A+ D  K   S  +  GKGKMRNRR I RKGPLI++  +   L +AFRNIPGVE 
Sbjct: 34  LKQFDAYLDTEKAKDSHAIHPGKGKMRNRRYISRKGPLIVYGMEGAKLVKAFRNIPGVEV 93

Query: 178 XXXXXXXXXXXAPGGHLGRFVIWTQSHSAGL-TPYSGHGRHHQNKRRTSTCPNRRW 342
                      APGGHLGRFVIWT+S    L + Y    +  + +R  + CP ++W
Sbjct: 94  ANVDRLNLLKLAPGGHLGRFVIWTKSSFEKLDSIYRSFEKKLRRRRMGTCCPVKKW 149


>UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1;
           Phaeosphaeria nodorum|Rep: Putative uncharacterized
           protein - Phaeosphaeria nodorum (Septoria nodorum)
          Length = 349

 Score = 94.3 bits (224), Expect = 2e-18
 Identities = 47/98 (47%), Positives = 60/98 (61%), Gaps = 3/98 (3%)
 Frame = +1

Query: 1   LRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQG---LTRAFRNIPGV 171
           L+ + A +D  K   S++LRAGKGK+R RR  QR+GPL+I+N D+    L +AFRNIPGV
Sbjct: 150 LKAVGAGADCEKAKNSRKLRAGKGKLRGRRHKQRRGPLVIYNPDEDGKELVKAFRNIPGV 209

Query: 172 EXXXXXXXXXXXXAPGGHLGRFVIWTQSHSAGLTPYSG 285
           E            APGGHLGRF++WT S    L    G
Sbjct: 210 ETSSVYSMNLLQLAPGGHLGRFIVWTSSAFGALDTIYG 247



 Score = 70.9 bits (166), Expect = 3e-11
 Identities = 40/90 (44%), Positives = 55/90 (61%), Gaps = 5/90 (5%)
 Frame = +3

Query: 249 SVAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLR-----APNKR 413
           S AFG LD ++GS   PS  KK+F LP   M   DL++++ S +I+KVLR     A +KR
Sbjct: 236 SSAFGALDTIYGSTTEPSALKKDFLLPSTMMKQPDLSKIINSSDIQKVLRPVRGGAVSKR 295

Query: 414 VIRATRKLNPLTNNKAMLKLNPYAAVLKEE 503
            +   +K NPL N +  L+LNPYAA   +E
Sbjct: 296 GV--VQKKNPLKNFQVQLRLNPYAATFSKE 323


>UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5;
           Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
           protein L4 - Entamoeba histolytica HM-1:IMSS
          Length = 431

 Score = 92.7 bits (220), Expect = 8e-18
 Identities = 42/86 (48%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
 Frame = +1

Query: 1   LRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIF-NKDQGLTRAFRNIPGVEX 177
           L+++ A+SD+LKV  S+ +RAG+GKMR R+  +RKGPL+++ N D    +AFRNIPGV+ 
Sbjct: 172 LKKINAYSDVLKVIASKTVRAGQGKMRGRKIKERKGPLVVYGNDDLQAVKAFRNIPGVDT 231

Query: 178 XXXXXXXXXXXAPGGHLGRFVIWTQS 255
                      APG H+GRF+IWT+S
Sbjct: 232 CRVENLSVLNLAPGCHIGRFIIWTES 257



 Score = 55.2 bits (127), Expect = 1e-06
 Identities = 31/80 (38%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
 Frame = +3

Query: 255 AFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVI-RATR 431
           AF +L+ +FG+ K  ++ K  F +   +MA  D+ R++ + E  K+LRA  K V+ +  +
Sbjct: 258 AFKKLNTIFGTQKKMAQGKSGFRIAHAQMAVPDMKRVVVAAEKAKLLRA--KIVLPKVPK 315

Query: 432 KLNPLTNNKAMLKLNPYAAV 491
           + NPL N  AM+KLNPYA +
Sbjct: 316 RANPLKNWAAMVKLNPYAKI 335


>UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2;
           Sclerotiniaceae|Rep: 60S ribosomal protein L4 -
           Sclerotinia sclerotiorum 1980
          Length = 373

 Score = 89.4 bits (212), Expect = 7e-17
 Identities = 43/88 (48%), Positives = 58/88 (65%), Gaps = 3/88 (3%)
 Frame = +1

Query: 1   LRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFN---KDQGLTRAFRNIPGV 171
           L+ + A  D+ KV  S++LRAGKGK+R RR  QR+GPL++++     + L RAFRN+PGV
Sbjct: 173 LKTVGALKDVEKVKDSRKLRAGKGKLRGRRHRQRRGPLVVYDGATDGKELVRAFRNLPGV 232

Query: 172 EXXXXXXXXXXXXAPGGHLGRFVIWTQS 255
           E            APGGHLGRF+IW+ S
Sbjct: 233 ETCDVYSLNLLQLAPGGHLGRFIIWSSS 260



 Score = 65.7 bits (153), Expect = 1e-09
 Identities = 36/88 (40%), Positives = 53/88 (60%), Gaps = 3/88 (3%)
 Frame = +3

Query: 249 SVAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVI--R 422
           S AF  LD ++G+   PS  KK+F LP   ++  D+ RL+ S E++ V+RA     +  R
Sbjct: 259 SSAFKALDNIYGTTTAPSALKKDFLLPSNVVSQADIGRLINSSELQSVIRAAKGSALTKR 318

Query: 423 A-TRKLNPLTNNKAMLKLNPYAAVLKEE 503
           A  +K NPL N + +L+LNPYAA   +E
Sbjct: 319 AGVQKKNPLLNKQVLLRLNPYAAGYSKE 346


>UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL4 -
           Streblomastix strix
          Length = 492

 Score = 87.8 bits (208), Expect = 2e-16
 Identities = 42/84 (50%), Positives = 55/84 (65%)
 Frame = +1

Query: 1   LRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXX 180
           L  LKA  D+    +S+R+R G GK RNRR  QR+G LI+ ++++GL  AFRNI GV+  
Sbjct: 171 LAALKASDDVKHSAESKRIRVGSGKARNRRYTQRRGVLIVHDQNEGLANAFRNISGVDIS 230

Query: 181 XXXXXXXXXXAPGGHLGRFVIWTQ 252
                     APGGHLGRF+IWT+
Sbjct: 231 NVXRLNIRDLAPGGHLGRFIIWTE 254



 Score = 44.8 bits (101), Expect = 0.002
 Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 6/78 (7%)
 Frame = +3

Query: 255 AFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRA---PNKRVIRA 425
           A+ +LD L+G+    +  K  +  P P + NTDL+R++ S  ++ VL+A    +K++I  
Sbjct: 256 AYKKLDKLYGTRFRTALLKNEYKHPTPSVTNTDLSRIIHSPTVQSVLKARGKQSKKIINV 315

Query: 426 TRKL---NPLTNNKAMLK 470
            R L   + L+ N A +K
Sbjct: 316 RRNLLIASKLSQNNARIK 333


>UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium
           caudatum|Rep: Ribosomal protein L4 - Paramecium caudatum
          Length = 252

 Score = 87.4 bits (207), Expect = 3e-16
 Identities = 45/100 (45%), Positives = 60/100 (60%), Gaps = 1/100 (1%)
 Frame = +1

Query: 1   LRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLII-FNKDQGLTRAFRNIPGVEX 177
           L+R  A+ D+ KV  ++ +RAG  K R ++   RKGPL++ FN++  L +AFRN+PGVE 
Sbjct: 18  LKRFGAFEDVQKVVSTKTIRAGVSKSRGKKYRVRKGPLVVYFNENAKLLKAFRNVPGVEV 77

Query: 178 XXXXXXXXXXXAPGGHLGRFVIWTQSHSAGLTPYSGHGRH 297
                      APGG LGRFVIWTQS  A L    G  R+
Sbjct: 78  VNVTRLNLLQLAPGGQLGRFVIWTQSAFANLDKLFGTYRY 117



 Score = 65.3 bits (152), Expect = 1e-09
 Identities = 32/78 (41%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
 Frame = +3

Query: 255 AFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIR-KVLRAPNKRVIRATR 431
           AF  LD LFG+++  S  K  + L +P + N DL R++ S++++ KV  A    V+   +
Sbjct: 104 AFANLDKLFGTYRYSSILKDGYQLLRPLLTNPDLARIINSNQVQEKVQAAKQTTVLHEVQ 163

Query: 432 KLNPLTNNKAMLKLNPYA 485
           K NPL N+KA+ +LNPYA
Sbjct: 164 KKNPLKNSKALDRLNPYA 181


>UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2;
           Oligohymenophorea|Rep: Ribosomal protein L4, putative -
           Paramecium tetraurelia
          Length = 406

 Score = 85.4 bits (202), Expect = 1e-15
 Identities = 45/100 (45%), Positives = 60/100 (60%), Gaps = 1/100 (1%)
 Frame = +1

Query: 1   LRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLII-FNKDQGLTRAFRNIPGVEX 177
           L+R  A+ D+ KV  ++ +RAG  K R ++   RKGPL++ FN++  L +AFRN+PGVE 
Sbjct: 172 LKRFGAFEDVQKVVSTKVVRAGISKQRGKKYRVRKGPLVVYFNENAKLLKAFRNVPGVEV 231

Query: 178 XXXXXXXXXXXAPGGHLGRFVIWTQSHSAGLTPYSGHGRH 297
                      APGG LGRFVIWTQS  A L    G  R+
Sbjct: 232 VNVTRLNLLQLAPGGQLGRFVIWTQSAFAHLDKLFGTYRY 271



 Score = 67.3 bits (157), Expect = 3e-10
 Identities = 37/97 (38%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
 Frame = +3

Query: 255 AFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIR-KVLRAPNKRVIRATR 431
           AF  LD LFG+++  S  K  + L +P + N DL R++ S++++ KV  A   +V+   +
Sbjct: 258 AFAHLDKLFGTYRYASVLKDGYQLLRPLLTNPDLARIINSNQVQEKVQPAKTTKVLHDVQ 317

Query: 432 KLNPLTNNKAMLKLNPYAAVLKEESYLELRRRKNLKG 542
           K NPL N KAM +LNPYA   K+ +      + N KG
Sbjct: 318 KKNPLKNTKAMDRLNPYAK--KQRAAAVAAIKANTKG 352


>UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal
           protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
           similar to ribosomal protein L4 - Canis familiaris
          Length = 248

 Score = 84.6 bits (200), Expect = 2e-15
 Identities = 40/77 (51%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
 Frame = +3

Query: 252 VAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRV-IRAT 428
           +AF +LD L+G+W   +  K N+NLP  KM NTDL+R+LK   I++ LRAP KR+  R  
Sbjct: 172 IAFCKLDDLYGTWPKAASLKSNYNLPMHKMLNTDLSRILKRPGIQRALRAPRKRIHRRVL 231

Query: 429 RKLNPLTNNKAMLKLNP 479
           +K NPL N + MLKLNP
Sbjct: 232 KKKNPLKNLRLMLKLNP 248



 Score = 78.2 bits (184), Expect = 2e-13
 Identities = 34/50 (68%), Positives = 43/50 (86%)
 Frame = +1

Query: 1   LRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRA 150
           L++LKAW+DI KVY SQR+RAGKGKMRNRR IQR+G  II+N+D G+ +A
Sbjct: 112 LKKLKAWNDIKKVYASQRMRAGKGKMRNRRPIQRRGSCIIYNEDNGIIKA 161


>UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lamblia
           ATCC 50803|Rep: GLP_79_45017_44067 - Giardia lamblia
           ATCC 50803
          Length = 316

 Score = 82.2 bits (194), Expect = 1e-14
 Identities = 38/82 (46%), Positives = 52/82 (63%)
 Frame = +1

Query: 25  DILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXX 204
           D+ +   S+ +RAG+GKMRNRR I RKGPL+I+N +  + R FRN+PGV+          
Sbjct: 167 DVERCKDSRHIRAGRGKMRNRRYITRKGPLVIYNTED-VARGFRNLPGVDLCHVSSIRLL 225

Query: 205 XXAPGGHLGRFVIWTQSHSAGL 270
             APG H GR ++WT+S  A L
Sbjct: 226 ELAPGSHPGRLILWTKSAFASL 247



 Score = 45.2 bits (102), Expect = 0.002
 Identities = 19/62 (30%), Positives = 39/62 (62%)
 Frame = +3

Query: 309 KKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAA 488
           K+N+ LP+  +  TD+ R+L+SD ++K    P +  +   RK++P ++ +A+ +L+P   
Sbjct: 254 KQNYTLPRSCITQTDIERILQSDAVQKTF-VPKRDPLVIERKVDPFSSKEALARLDPSGT 312

Query: 489 VL 494
           V+
Sbjct: 313 VM 314


>UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1,
           putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
           protein L4/L1, putative - Plasmodium chabaudi
          Length = 411

 Score = 74.9 bits (176), Expect = 2e-12
 Identities = 34/76 (44%), Positives = 48/76 (63%)
 Frame = +1

Query: 25  DILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXX 204
           ++ ++ KS +LRA  GKMRNR+     GPLII++ D G+ +AFRNIPGV+          
Sbjct: 179 EVNRLIKSXKLRARXGKMRNRKYKISNGPLIIYSXDSGIKKAFRNIPGVDLCNVTKLNLL 238

Query: 205 XXAPGGHLGRFVIWTQ 252
             APGG +GR  IW++
Sbjct: 239 KLAPGGSIGRLCIWSE 254



 Score = 50.8 bits (116), Expect = 3e-05
 Identities = 26/90 (28%), Positives = 48/90 (53%)
 Frame = +3

Query: 255 AFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRK 434
           AF +LD ++G        KKN+ LP+P + N D+ R++ SD+++  L        + T+ 
Sbjct: 256 AFKKLDVIYGKTFQKYVTKKNYILPKPIVNNADIYRIINSDQVQASLLDKKSPCKKRTQN 315

Query: 435 LNPLTNNKAMLKLNPYAAVLKEESYLELRR 524
            N LTN     +LNP   +L+  +  ++++
Sbjct: 316 KNSLTNFAVRCRLNPAYKLLRALAVRKMKK 345


>UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3;
           Trichomonas vaginalis G3|Rep: Ribosomal protein,
           putative - Trichomonas vaginalis G3
          Length = 370

 Score = 74.1 bits (174), Expect = 3e-12
 Identities = 32/85 (37%), Positives = 49/85 (57%)
 Frame = +1

Query: 1   LRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXX 180
           L+++  + D+ +V      R+ KGK R      +KGPL+I+N+D+G+ +AFRNIPGVE  
Sbjct: 168 LKKVGVYGDVQRVLDGSVHRSSKGKFRRAAYKTKKGPLVIYNEDKGIVKAFRNIPGVETI 227

Query: 181 XXXXXXXXXXAPGGHLGRFVIWTQS 255
                     AP   +GR  +WT+S
Sbjct: 228 SVKALALAKLAPAAQVGRLTVWTES 252


>UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9;
           Euryarchaeota|Rep: 50S ribosomal protein L4P -
           Archaeoglobus fulgidus
          Length = 252

 Score = 74.1 bits (174), Expect = 3e-12
 Identities = 31/84 (36%), Positives = 51/84 (60%)
 Frame = +1

Query: 4   RRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXX 183
           R +  ++D+ +  + +R RAG+GKMR RR +++K  L++  KD G+ +A +N+PGV+   
Sbjct: 159 RAIGVYADVERAKERKRYRAGRGKMRGRRYVKKKSVLLVVGKDDGVVKAAKNLPGVDAVV 218

Query: 184 XXXXXXXXXAPGGHLGRFVIWTQS 255
                    APG H GR  +WT+S
Sbjct: 219 VKDLNVELLAPGCHPGRLTVWTKS 242


>UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n=4;
           Cryptosporidium|Rep: 60S ribosomal protein-like,
           putative - Cryptosporidium parvum Iowa II
          Length = 394

 Score = 72.9 bits (171), Expect = 7e-12
 Identities = 39/120 (32%), Positives = 61/120 (50%)
 Frame = +1

Query: 25  DILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXX 204
           ++ ++  S  +R GKGKMRNRRR+   GPL+++ +D G+ +A RNI GV+          
Sbjct: 182 EMKRIESSIAIRCGKGKMRNRRRVCAVGPLVVYAEDNGIVKAMRNIKGVDTCSVERLNLL 241

Query: 205 XXAPGGHLGRFVIWTQSHSAGLTPYSGHGRHHQNKRRTSTCPNRRWPTLTSHVFSSLMRS 384
             APGG  GR  I+T+     L    G   H  + +   T P    P +T+   + ++ S
Sbjct: 242 RLAPGGTFGRLTIFTKGAIKRLQEIYGSYTHGSSSKVGYTLPR---PAMTNADITRIINS 298



 Score = 50.8 bits (116), Expect = 3e-05
 Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
 Frame = +3

Query: 255 AFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPN-----KRVI 419
           A  RL  ++GS+   S  K  + LP+P M N D+TR++ S E++ VLR          + 
Sbjct: 259 AIKRLQEIYGSYTHGSSSKVGYTLPRPAMTNADITRIINSTEVQSVLRPLRGFRCMGSMG 318

Query: 420 RATRKLNPLTNNKAMLKLNPYAAVLKEESYL 512
           R+  K N LTN      LNP    L++ + L
Sbjct: 319 RSKTKKNNLTNLTKRACLNPAYTSLRKSARL 349


>UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1;
           Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L4 -
           Encephalitozoon cuniculi
          Length = 335

 Score = 72.5 bits (170), Expect = 9e-12
 Identities = 38/85 (44%), Positives = 49/85 (57%)
 Frame = +1

Query: 1   LRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXX 180
           LR L    ++ +V KS+ +R GKGKMRNRR  QRKG LI+  +   +   FRNI GV+  
Sbjct: 168 LRNLNMTEELKRVEKSRGVRCGKGKMRNRRYTQRKGILIVHGESSEML-GFRNIRGVDQM 226

Query: 181 XXXXXXXXXXAPGGHLGRFVIWTQS 255
                     APGG  GR +IWT+S
Sbjct: 227 SIDSLDLLELAPGGVAGRLIIWTES 251



 Score = 33.9 bits (74), Expect = 3.7
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +3

Query: 255 AFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAP 404
           AF +LD +FG  +  ++    F LP   + + DL  L  SD ++ +L  P
Sbjct: 252 AFEKLDKIFGGVEREAELTPGFKLPNRIVTHDDLEELFYSDAVQAILDEP 301


>UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13;
           Euryarchaeota|Rep: 50S ribosomal protein L4P -
           Methanopyrus kandleri
          Length = 260

 Score = 66.5 bits (155), Expect = 6e-10
 Identities = 29/77 (37%), Positives = 45/77 (58%)
 Frame = +1

Query: 19  WSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXX 198
           W+D+ +   ++R+RAGKGK R RR ++ K  LI+ ++D+G+    RN PGV+        
Sbjct: 171 WADVERAKSNRRIRAGKGKRRGRRYVKPKSVLIVVDEDEGIKLGARNHPGVDVVEAMHLG 230

Query: 199 XXXXAPGGHLGRFVIWT 249
               APG H GR  ++T
Sbjct: 231 VEHLAPGAHPGRLTVFT 247


>UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1;
           Leishmania major strain Friedlin|Rep: Ribosomal protein
           L1a, putative - Leishmania major strain Friedlin
          Length = 432

 Score = 64.5 bits (150), Expect = 2e-09
 Identities = 31/74 (41%), Positives = 47/74 (63%)
 Frame = +1

Query: 1   LRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXX 180
           L+ + A  D+ +V  S+ +RAG+GKMRNRR + R+GP+++   ++G TRAFRNI G++  
Sbjct: 170 LKAIAAIDDVNRVNDSREIRAGRGKMRNRRYVARRGPMLVMPNNKG-TRAFRNIFGLDLA 228

Query: 181 XXXXXXXXXXAPGG 222
                     APGG
Sbjct: 229 NVSALTLLHLAPGG 242


>UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2;
           Euryarchaeota|Rep: 50S ribosomal protein L4P -
           Methanosphaera stadtmanae (strain DSM 3091)
          Length = 259

 Score = 63.3 bits (147), Expect = 5e-09
 Identities = 28/77 (36%), Positives = 45/77 (58%)
 Frame = +1

Query: 25  DILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXX 204
           DI++  K +++++GKGK+R R+    KGPL++   D+G++   RN  GV+          
Sbjct: 169 DIVRAKKGRKIKSGKGKLRGRKYRTPKGPLVVVGNDRGISLGARNHAGVDVVEVNNINAE 228

Query: 205 XXAPGGHLGRFVIWTQS 255
             APG H GR  I+T+S
Sbjct: 229 LLAPGTHAGRLTIYTKS 245


>UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3;
           Archaea|Rep: 50S ribosomal protein L4P - Sulfolobus
           solfataricus
          Length = 267

 Score = 62.1 bits (144), Expect = 1e-08
 Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
 Frame = +1

Query: 1   LRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLII-FNKDQGLTRAFRNIPGVEX 177
           L+++  + D+ +V +  R+RAGKGKMR R+  +  GPLII  + +  + +A RN+ GV+ 
Sbjct: 167 LKKIGVYDDVERVKERIRIRAGKGKMRGRKYKEPIGPLIIVHDSNSPIIKAARNLAGVDV 226

Query: 178 XXXXXXXXXXXAPGGHLGRFVIWTQS 255
                      APG H GR  I+T+S
Sbjct: 227 VNAKDVSVIHLAPGAHPGRLTIYTES 252


>UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular
           organisms|Rep: Ribosomal protein L4 - uncultured marine
           group II euryarchaeote DeepAnt-JyKC7
          Length = 304

 Score = 60.5 bits (140), Expect = 4e-08
 Identities = 28/78 (35%), Positives = 43/78 (55%)
 Frame = +1

Query: 22  SDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXX 201
           +D+ +    + +RAGKG MR R+    K  L++ ++  GL +A RNIPGV+         
Sbjct: 221 ADLDRARTGRTIRAGKGTMRGRKYRTPKSILLVVSQTNGLAKAARNIPGVDIVVAKDLSA 280

Query: 202 XXXAPGGHLGRFVIWTQS 255
              APGG  GR  +WT++
Sbjct: 281 EDLAPGGDAGRLTVWTKA 298


>UniRef50_UPI0000DA3D75 Cluster: PREDICTED: similar to ribosomal
           protein L4; n=3; Rattus norvegicus|Rep: PREDICTED:
           similar to ribosomal protein L4 - Rattus norvegicus
          Length = 140

 Score = 59.3 bits (137), Expect = 9e-08
 Identities = 30/68 (44%), Positives = 41/68 (60%)
 Frame = +3

Query: 336 KMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKEESYLE 515
           KM N+DL+R+LK  EI++ L+AP K +     K NPLTN + MLKLNP A  +   + L 
Sbjct: 3   KMMNSDLSRILKIPEIQRALQAPCKEIQHRVSKKNPLTNLRIMLKLNPDAKTMHRNTILP 62

Query: 516 LRRRKNLK 539
             R   L+
Sbjct: 63  EARNHKLQ 70


>UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2;
           Cryptomonadaceae|Rep: 60s ribosomal protein L1 -
           Guillardia theta (Cryptomonas phi)
          Length = 255

 Score = 58.4 bits (135), Expect = 2e-07
 Identities = 28/76 (36%), Positives = 44/76 (57%)
 Frame = +1

Query: 22  SDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXX 201
           + I++    ++L++GKGKMRNRR  +  GPL++F  +    ++ RNI  ++         
Sbjct: 172 NSIVRNKLKRKLKSGKGKMRNRRFKKPTGPLLVFKNN---LKSLRNIANIDCMKISALNL 228

Query: 202 XXXAPGGHLGRFVIWT 249
              APGGHLGR  IW+
Sbjct: 229 TKLAPGGHLGRLCIWS 244


>UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4;
           Thermoplasmatales|Rep: 50S ribosomal protein L4P -
           Thermoplasma acidophilum
          Length = 255

 Score = 58.0 bits (134), Expect = 2e-07
 Identities = 31/84 (36%), Positives = 46/84 (54%)
 Frame = +1

Query: 1   LRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXX 180
           L+ L  + DI +  + + +RAG+GKMR RR  Q K  LI+      + +AFR++PGV+  
Sbjct: 162 LKNLGVYEDIERSREGKHIRAGRGKMRGRRYKQPKSVLIVARNSSAM-KAFRSLPGVDIA 220

Query: 181 XXXXXXXXXXAPGGHLGRFVIWTQ 252
                     APGG  GR  I+T+
Sbjct: 221 SPNSLSIRKLAPGGVGGRLTIFTE 244


>UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9;
           Archaea|Rep: 50S ribosomal protein L4P - Pyrobaculum
           aerophilum
          Length = 283

 Score = 58.0 bits (134), Expect = 2e-07
 Identities = 30/81 (37%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
 Frame = +1

Query: 10  LKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNK-DQGLTRAFRNIPGVEXXXX 186
           L  W D+ +  +  ++RAGKGKMR RR  + K  L++ +  +  L  A RN PGV+    
Sbjct: 191 LGLWPDVERAAEGVKIRAGKGKMRGRRYKEPKSVLVVVSDLNAPLIAAVRNFPGVDVVAV 250

Query: 187 XXXXXXXXAPGGHLGRFVIWT 249
                   APGG  GR  +WT
Sbjct: 251 NNLNILVLAPGGVPGRLTLWT 271


>UniRef50_P60847 Cluster: 50S ribosomal protein L4P; n=1;
           Nanoarchaeum equitans|Rep: 50S ribosomal protein L4P -
           Nanoarchaeum equitans
          Length = 268

 Score = 56.0 bits (129), Expect = 8e-07
 Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
 Frame = +1

Query: 1   LRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNK-DQGLTRAFRNIPGVEX 177
           L +L    ++ +VY+ +R RAGKGK R R  I+RKGPLI+ N  ++ L +A  NIPG++ 
Sbjct: 172 LLKLGLEKELERVYEIKR-RAGKGKRRGRAYIERKGPLIVVNDYNEQLFKAVDNIPGLDI 230

Query: 178 XXXXXXXXXXXAPGGHLGRFVI 243
                      APG   GR +I
Sbjct: 231 EEVPNLNVELLAPGAKPGRLLI 252


>UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8;
           Archaea|Rep: 50S ribosomal protein L4P - Aeropyrum
           pernix
          Length = 272

 Score = 53.6 bits (123), Expect = 4e-06
 Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
 Frame = +1

Query: 1   LRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQG-LTRAFRNIPGVEX 177
           L  +  + D+L+  + +R  AGKGKMR RR    K  L +    +  L  A + +PGV+ 
Sbjct: 173 LESVGVYEDVLRAKEGKRYNAGKGKMRGRRYKVPKSVLFVLEDPRSPLALAVKGMPGVDV 232

Query: 178 XXXXXXXXXXXAPGGHLGRFVIWT 249
                      APGGH GR  I+T
Sbjct: 233 VTPTLLSVLHLAPGGHPGRLTIYT 256


>UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia
           bovis|Rep: Ribosomal protein RPL4A - Babesia bovis
          Length = 360

 Score = 49.2 bits (112), Expect = 9e-05
 Identities = 30/79 (37%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
 Frame = +1

Query: 49  QRLRAGKGKMRNRRRIQRKGPLIIFNKD--QGLTRAFRNIPGVEXXXXXXXXXXXXAPGG 222
           +R+    G+ R+ R+ +  GPLII      +G  RAFRNIPGVE            AP G
Sbjct: 180 KRIDKVTGRARDGRKKRPVGPLIILRATAVEG-KRAFRNIPGVEVACVERLNLLKLAPAG 238

Query: 223 HLGRFVIWTQSHSAGLTPY 279
            LGR  +W++S    L  Y
Sbjct: 239 ALGRLCVWSKSAFEALDDY 257



 Score = 32.7 bits (71), Expect = 8.6
 Identities = 14/37 (37%), Positives = 23/37 (62%)
 Frame = +3

Query: 324 LPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRK 434
           +P   + N DL+ L++S  ++  LRAP +   +ATRK
Sbjct: 261 MPTKLLKNADLSALIESTPVQAALRAPREGTPKATRK 297


>UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1,
           putative; n=2; Theileria|Rep: 60S ribosomal subunit
           protein L4/L1, putative - Theileria annulata
          Length = 426

 Score = 39.9 bits (89), Expect = 0.056
 Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 4/63 (6%)
 Frame = +1

Query: 79  RNRRRIQRK--GPLIIFNKD--QGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIW 246
           R +R+ +++  GPL++      +G  RAFRNIPGV+            AP G LGR VI+
Sbjct: 187 RTKRKGKKRPVGPLVVMRSTAVEG-KRAFRNIPGVDVMSVEHMNLLKLAPAGTLGRLVIF 245

Query: 247 TQS 255
           ++S
Sbjct: 246 SKS 248


>UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarcula
           marismortui|Rep: 50S ribosomal protein L4P - Haloarcula
           marismortui (Halobacterium marismortui)
          Length = 246

 Score = 37.5 bits (83), Expect = 0.30
 Identities = 24/85 (28%), Positives = 42/85 (49%)
 Frame = +1

Query: 1   LRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXX 180
           L  L   +DI +  ++ +++AG+G  R R+  +R   ++    D+  T A RN+ G +  
Sbjct: 157 LEALDVHADIDRADET-KIKAGQGSARGRK-YRRPASILFVTSDEPSTAA-RNLAGADVA 213

Query: 181 XXXXXXXXXXAPGGHLGRFVIWTQS 255
                     APGG  GR  ++T+S
Sbjct: 214 TASEVNTEDLAPGGAPGRLTVFTES 238


>UniRef50_Q4TDL2 Cluster: Chromosome undetermined SCAF6181, whole
           genome shotgun sequence; n=1; Tetraodon
           nigroviridis|Rep: Chromosome undetermined SCAF6181,
           whole genome shotgun sequence - Tetraodon nigroviridis
           (Green puffer)
          Length = 383

 Score = 37.1 bits (82), Expect = 0.40
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +1

Query: 244 WTQSHSAGLTPYSGHGRHHQNKRRTSTCPNR 336
           W  SH  G T +    +HHQ+ ++TS CP R
Sbjct: 309 WIHSHRLGPTSFHSSAQHHQSAQKTSKCPTR 339


>UniRef50_Q23TC4 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 966

 Score = 35.1 bits (77), Expect = 1.6
 Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
 Frame = +3

Query: 330 QPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKEESY 509
           Q K AN  + RLL S+  +   ++P+  ++    KLNP++ N + L LN   + L ++S 
Sbjct: 330 QHKRANIQV-RLLSSEISKNQSQSPSNNILNQQNKLNPISTNTSQL-LNKQISQLNQKS- 386

Query: 510 LELRRRKNLKGFLLMPRRVD*SCLS---ENPRYERLRNYGEKETPRTFKE 650
           L  R +   K  +     +     S   +N  ++R R+  +K    TF E
Sbjct: 387 LTQRSQILSKSPISQAANISSMYFSPQNKNSIFQRDRSISQKNPKSTFSE 436


>UniRef50_Q7KKH3 Cluster: Protein SDA1 homolog; n=4; Coelomata|Rep:
           Protein SDA1 homolog - Drosophila melanogaster (Fruit
           fly)
          Length = 712

 Score = 35.1 bits (77), Expect = 1.6
 Identities = 31/116 (26%), Positives = 57/116 (49%), Gaps = 10/116 (8%)
 Frame = +3

Query: 303 KQKKNFNLPQPKMANTDL--TRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKA-MLKL 473
           K+KK+  +   K A  +L  TR+   ++ +++  A  K+ + + RK  PL  ++A  +KL
Sbjct: 566 KEKKDMRILNQKEAAQELALTRIFTDEDFKRINAANLKKTVTSARK-RPLEQDRAEFVKL 624

Query: 474 NPYAAVLK-----EESYLELRR--RKNLKGFLLMPRRVD*SCLSENPRYERLRNYG 620
           N    + K     +ES LE  +  R++ + F     RV+  C   N    + +N+G
Sbjct: 625 NSIEMIYKKRKHDKESRLETVQAGRQDRERFGWKDGRVNEHCSKTNREKRKTKNFG 680


>UniRef50_A5K648 Cluster: CW-type zinc finger domain-containing
            protein; n=1; Plasmodium vivax|Rep: CW-type zinc finger
            domain-containing protein - Plasmodium vivax
          Length = 3410

 Score = 33.9 bits (74), Expect = 3.7
 Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 1/101 (0%)
 Frame = +3

Query: 327  PQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPL-TNNKAMLKLNPYAAVLKEE 503
            P  + ++  L R+LKS  +    + P   + R+ R L P+ ++N ++ K + Y  +    
Sbjct: 1567 PNQRSSDNHLPRILKSKSLSNFEKRPYFHLDRSERSLLPISSSNMSIPKSSSYNRI-NSG 1625

Query: 504  SYLELRRRKNLKGFLLMPRRVD*SCLSENPRYERLRNYGEK 626
             Y +LRR +   G  L+ R    S    + R   L NY  K
Sbjct: 1626 DYFDLRRGEVASGHYLLKRNAMGSGGDHSMRDIFLSNYYAK 1666


>UniRef50_Q28ZB7 Cluster: GA20803-PA; n=1; Drosophila
           pseudoobscura|Rep: GA20803-PA - Drosophila pseudoobscura
           (Fruit fly)
          Length = 655

 Score = 33.5 bits (73), Expect = 4.9
 Identities = 30/123 (24%), Positives = 57/123 (46%), Gaps = 10/123 (8%)
 Frame = +3

Query: 282 GSWKTPSKQKKNFNLPQPKMANTDL--TRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNN 455
           G W T +    +  +   K A  +L  TR+   ++ +++  A  K+ +  +RK  PL  +
Sbjct: 502 GQWVTVNHSDGDLKILNQKEAAQELALTRIFTDEDFKRINAANLKKTVTNSRK-RPLEQD 560

Query: 456 KA-MLKLNPYAAVLK-----EESYLELRR--RKNLKGFLLMPRRVD*SCLSENPRYERLR 611
           +A  +KLN    + K     +ES +E  +  R++ + F     RV+  C   N    + +
Sbjct: 561 RAEFVKLNSIEMIFKKRKHDKESRMETVQAGRQDRERFGWKDGRVNEHCSKTNSEKRKTK 620

Query: 612 NYG 620
           N+G
Sbjct: 621 NFG 623


>UniRef50_Q23DJ6 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1067

 Score = 33.1 bits (72), Expect = 6.5
 Identities = 19/72 (26%), Positives = 36/72 (50%)
 Frame = +3

Query: 321 NLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKE 500
           NLP      + +   L+  +  ++L   ++R    T+K+N + NNK +LK      V + 
Sbjct: 576 NLPLVSNQASAINIKLQEKDFYELLNLESERAAITTKKINRIHNNKMVLKSAFEVNVQQS 635

Query: 501 ESYLELRRRKNL 536
           +  + L++ KNL
Sbjct: 636 DEVILLKQEKNL 647


>UniRef50_A4QS15 Cluster: Putative uncharacterized protein; n=2;
           Magnaporthe grisea|Rep: Putative uncharacterized protein
           - Magnaporthe grisea (Rice blast fungus) (Pyricularia
           grisea)
          Length = 1453

 Score = 33.1 bits (72), Expect = 6.5
 Identities = 15/33 (45%), Positives = 22/33 (66%)
 Frame = +3

Query: 210 GSGRPSWTFRHLDSVAFGRLDPLFGSWKTPSKQ 308
           GSG P++  RH D++ F   DP FG+ KTP ++
Sbjct: 846 GSGIPAFESRHKDTIKFYH-DPRFGNLKTPEQR 877


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 640,723,828
Number of Sequences: 1657284
Number of extensions: 12471051
Number of successful extensions: 33375
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 32332
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33347
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53305790091
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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