BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS30635 (684 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2; Endopterygot... 161 1e-38 UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryo... 129 5e-29 UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryo... 123 4e-27 UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;... 110 3e-23 UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal ... 99 5e-20 UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974, w... 98 2e-19 UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; ... 94 2e-18 UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; E... 93 8e-18 UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Scleroti... 89 7e-17 UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL... 88 2e-16 UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium c... 87 3e-16 UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Ol... 85 1e-15 UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal ... 85 2e-15 UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lambli... 82 1e-14 UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, pu... 75 2e-12 UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3; Trich... 74 3e-12 UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9; Euryarc... 74 3e-12 UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n... 73 7e-12 UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1; Encephal... 73 9e-12 UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13; Euryar... 66 6e-10 UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1; L... 64 2e-09 UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2; Euryarc... 63 5e-09 UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3; Archaea... 62 1e-08 UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular org... 60 4e-08 UniRef50_UPI0000DA3D75 Cluster: PREDICTED: similar to ribosomal ... 59 9e-08 UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2; Cryptomo... 58 2e-07 UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4; Thermop... 58 2e-07 UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9; Archaea... 58 2e-07 UniRef50_P60847 Cluster: 50S ribosomal protein L4P; n=1; Nanoarc... 56 8e-07 UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8; Archaea... 54 4e-06 UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia b... 49 9e-05 UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1, pu... 40 0.056 UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarc... 38 0.30 UniRef50_Q4TDL2 Cluster: Chromosome undetermined SCAF6181, whole... 37 0.40 UniRef50_Q23TC4 Cluster: Putative uncharacterized protein; n=1; ... 35 1.6 UniRef50_Q7KKH3 Cluster: Protein SDA1 homolog; n=4; Coelomata|Re... 35 1.6 UniRef50_A5K648 Cluster: CW-type zinc finger domain-containing p... 34 3.7 UniRef50_Q28ZB7 Cluster: GA20803-PA; n=1; Drosophila pseudoobscu... 33 4.9 UniRef50_Q23DJ6 Cluster: Putative uncharacterized protein; n=1; ... 33 6.5 UniRef50_A4QS15 Cluster: Putative uncharacterized protein; n=2; ... 33 6.5 >UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2; Endopterygota|Rep: Ribosomal protein 23 - Lonomia obliqua (Moth) Length = 274 Score = 161 bits (392), Expect = 1e-38 Identities = 76/103 (73%), Positives = 90/103 (87%) Frame = +3 Query: 255 AFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRK 434 AF RLD +FGSWKTPSK+KKNFNLPQPKMANTDL+RLLKS+EIR+VLRAP KRV+RATRK Sbjct: 121 AFERLDAIFGSWKTPSKEKKNFNLPQPKMANTDLSRLLKSEEIRRVLRAPIKRVVRATRK 180 Query: 435 LNPLTNNKAMLKLNPYAAVLKEESYLELRRRKNLKGFLLMPRR 563 LNPLTN KAMLKLNPYAAVLK+++ L+ +RKN + + +R Sbjct: 181 LNPLTNTKAMLKLNPYAAVLKKKAVLDQVKRKNKRALEVAEKR 223 Score = 144 bits (350), Expect = 1e-33 Identities = 71/128 (55%), Positives = 87/128 (67%) Frame = +1 Query: 1 LRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXX 180 LRR+KAWSD+LKVYKSQRLRAGKGKMRNRRR+ RKGPLII+NKDQGLTR+FRNIPGV+ Sbjct: 36 LRRIKAWSDVLKVYKSQRLRAGKGKMRNRRRLHRKGPLIIYNKDQGLTRSFRNIPGVDMV 95 Query: 181 XXXXXXXXXXAPGGHLGRFVIWTQSHSAGLTPYSGHGRHHQNKRRTSTCPNRRWPTLTSH 360 APGGH+GRF+IWTQS L G + +++ P P + + Sbjct: 96 NVNKLNLLHLAPGGHVGRFMIWTQSAFERLDAIFGSWKTPSKEKKNFNLPQ---PKMANT 152 Query: 361 VFSSLMRS 384 S L++S Sbjct: 153 DLSRLLKS 160 >UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryota|Rep: 60S ribosomal protein L4 - Drosophila melanogaster (Fruit fly) Length = 401 Score = 129 bits (312), Expect = 5e-29 Identities = 60/91 (65%), Positives = 72/91 (79%) Frame = +3 Query: 255 AFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRK 434 AF RL+ LFG+WK PS KK +NLPQPKMANTDL+RLLKS+EIRKVLR P KRV R+ R+ Sbjct: 259 AFARLNDLFGTWKKPSTLKKGYNLPQPKMANTDLSRLLKSEEIRKVLRDPRKRVFRSVRR 318 Query: 435 LNPLTNNKAMLKLNPYAAVLKEESYLELRRR 527 LNPLTN + ++KLNPYA VLK + L +R Sbjct: 319 LNPLTNVRQLIKLNPYAEVLKRRAALAAEKR 349 Score = 127 bits (306), Expect = 3e-28 Identities = 62/128 (48%), Positives = 82/128 (64%) Frame = +1 Query: 1 LRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXX 180 LRRLK W+DI KVYKSQR RAG+G MR+RRRI R+GPL++++KD+GL +AFRNIPG+E Sbjct: 174 LRRLKIWADIQKVYKSQRFRAGRGTMRDRRRIARRGPLVVYDKDEGLRKAFRNIPGIETI 233 Query: 181 XXXXXXXXXXAPGGHLGRFVIWTQSHSAGLTPYSGHGRHHQNKRRTSTCPNRRWPTLTSH 360 APGGH+GRFVIWT+S A L G + ++ P P + + Sbjct: 234 NVDKLNLLKLAPGGHVGRFVIWTESAFARLNDLFGTWKKPSTLKKGYNLPQ---PKMANT 290 Query: 361 VFSSLMRS 384 S L++S Sbjct: 291 DLSRLLKS 298 >UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens (Human) Length = 427 Score = 123 bits (297), Expect = 4e-27 Identities = 54/85 (63%), Positives = 66/85 (77%) Frame = +1 Query: 1 LRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXX 180 L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+GP II+N+D G+ +AFRNIPG+ Sbjct: 171 LKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLL 230 Query: 181 XXXXXXXXXXAPGGHLGRFVIWTQS 255 APGGH+GRF IWT+S Sbjct: 231 NVSKLNILKLAPGGHVGRFCIWTES 255 Score = 101 bits (242), Expect = 2e-20 Identities = 46/95 (48%), Positives = 63/95 (66%) Frame = +3 Query: 255 AFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRK 434 AF +LD L+G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K Sbjct: 256 AFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLK 315 Query: 435 LNPLTNNKAMLKLNPYAAVLKEESYLELRRRKNLK 539 NPL N + MLKLNPYA ++ + L R L+ Sbjct: 316 KNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLR 350 >UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1; Ostreococcus tauri|Rep: Ribosomal protein RPL1/RPL2/RL4L4 - Ostreococcus tauri Length = 404 Score = 110 bits (265), Expect = 3e-23 Identities = 48/85 (56%), Positives = 66/85 (77%) Frame = +1 Query: 1 LRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXX 180 L++L A++DI KV S+ +R+GKGKMRNRR +QR+GPL+++++D G+TRAFRNIPGVE Sbjct: 174 LKQLGAYADIEKVKASRNVRSGKGKMRNRRYVQRRGPLVVYSEDNGVTRAFRNIPGVELC 233 Query: 181 XXXXXXXXXXAPGGHLGRFVIWTQS 255 APGGH+GRF+IWT+S Sbjct: 234 SVDRLGLLTLAPGGHVGRFIIWTKS 258 Score = 77.4 bits (182), Expect = 3e-13 Identities = 43/84 (51%), Positives = 51/84 (60%), Gaps = 2/84 (2%) Frame = +3 Query: 255 AFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIR--AT 428 AF +LD +FG+ + S KK + P MA TDLTRL+ SDEI+ L AP IR A Sbjct: 259 AFEKLDSIFGTSTSKSASKKGWKPPTNIMAQTDLTRLINSDEIQSALNAPKLGAIRAHAP 318 Query: 429 RKLNPLTNNKAMLKLNPYAAVLKE 500 K NPL N AM KLNPYA V +E Sbjct: 319 LKRNPLKNKSAMDKLNPYAKVARE 342 >UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED: similar to ribosomal protein L4 - Canis familiaris Length = 253 Score = 99 bits (238), Expect = 5e-20 Identities = 53/110 (48%), Positives = 70/110 (63%), Gaps = 1/110 (0%) Frame = +3 Query: 213 SGRPSWT-FRHLDSVAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRK 389 S RPS T L +AF +LD L+G+W + K N+NLP KM NTDL+R+LKS EI++ Sbjct: 80 SSRPSETSLELLYLIAFCKLDDLYGTWHKAASLKSNYNLPMHKMLNTDLSRILKSPEIQR 139 Query: 390 VLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKEESYLELRRRKNLK 539 L+AP K++ R K NPL N MLKLNPYA ++ + LR+ KN K Sbjct: 140 ALQAPRKKIHRRVLKKNPLKNLGIMLKLNPYAKTMRRNTI--LRQAKNHK 187 Score = 52.0 bits (119), Expect = 1e-05 Identities = 22/28 (78%), Positives = 26/28 (92%) Frame = +1 Query: 1 LRRLKAWSDILKVYKSQRLRAGKGKMRN 84 L++LKAW+DI KVY SQR+RAGKGKMRN Sbjct: 34 LKKLKAWNDIKKVYASQRMRAGKGKMRN 61 >UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_974, whole genome shotgun sequence - Vitis vinifera (Grape) Length = 386 Score = 98.3 bits (234), Expect = 2e-19 Identities = 51/116 (43%), Positives = 67/116 (57%), Gaps = 2/116 (1%) Frame = +1 Query: 1 LRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQG-LTRAFRNIPGVEX 177 L++ A+ D K S + GKGKMRNRR I RKGPLI++ + L +AFRNIPGVE Sbjct: 34 LKQFDAYLDTEKAKDSHAIHPGKGKMRNRRYISRKGPLIVYGMEGAKLVKAFRNIPGVEV 93 Query: 178 XXXXXXXXXXXAPGGHLGRFVIWTQSHSAGL-TPYSGHGRHHQNKRRTSTCPNRRW 342 APGGHLGRFVIWT+S L + Y + + +R + CP ++W Sbjct: 94 ANVDRLNLLKLAPGGHLGRFVIWTKSSFEKLDSIYRSFEKKLRRRRMGTCCPVKKW 149 >UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; Phaeosphaeria nodorum|Rep: Putative uncharacterized protein - Phaeosphaeria nodorum (Septoria nodorum) Length = 349 Score = 94.3 bits (224), Expect = 2e-18 Identities = 47/98 (47%), Positives = 60/98 (61%), Gaps = 3/98 (3%) Frame = +1 Query: 1 LRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQG---LTRAFRNIPGV 171 L+ + A +D K S++LRAGKGK+R RR QR+GPL+I+N D+ L +AFRNIPGV Sbjct: 150 LKAVGAGADCEKAKNSRKLRAGKGKLRGRRHKQRRGPLVIYNPDEDGKELVKAFRNIPGV 209 Query: 172 EXXXXXXXXXXXXAPGGHLGRFVIWTQSHSAGLTPYSG 285 E APGGHLGRF++WT S L G Sbjct: 210 ETSSVYSMNLLQLAPGGHLGRFIVWTSSAFGALDTIYG 247 Score = 70.9 bits (166), Expect = 3e-11 Identities = 40/90 (44%), Positives = 55/90 (61%), Gaps = 5/90 (5%) Frame = +3 Query: 249 SVAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLR-----APNKR 413 S AFG LD ++GS PS KK+F LP M DL++++ S +I+KVLR A +KR Sbjct: 236 SSAFGALDTIYGSTTEPSALKKDFLLPSTMMKQPDLSKIINSSDIQKVLRPVRGGAVSKR 295 Query: 414 VIRATRKLNPLTNNKAMLKLNPYAAVLKEE 503 + +K NPL N + L+LNPYAA +E Sbjct: 296 GV--VQKKNPLKNFQVQLRLNPYAATFSKE 323 >UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal protein L4 - Entamoeba histolytica HM-1:IMSS Length = 431 Score = 92.7 bits (220), Expect = 8e-18 Identities = 42/86 (48%), Positives = 60/86 (69%), Gaps = 1/86 (1%) Frame = +1 Query: 1 LRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIF-NKDQGLTRAFRNIPGVEX 177 L+++ A+SD+LKV S+ +RAG+GKMR R+ +RKGPL+++ N D +AFRNIPGV+ Sbjct: 172 LKKINAYSDVLKVIASKTVRAGQGKMRGRKIKERKGPLVVYGNDDLQAVKAFRNIPGVDT 231 Query: 178 XXXXXXXXXXXAPGGHLGRFVIWTQS 255 APG H+GRF+IWT+S Sbjct: 232 CRVENLSVLNLAPGCHIGRFIIWTES 257 Score = 55.2 bits (127), Expect = 1e-06 Identities = 31/80 (38%), Positives = 50/80 (62%), Gaps = 1/80 (1%) Frame = +3 Query: 255 AFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVI-RATR 431 AF +L+ +FG+ K ++ K F + +MA D+ R++ + E K+LRA K V+ + + Sbjct: 258 AFKKLNTIFGTQKKMAQGKSGFRIAHAQMAVPDMKRVVVAAEKAKLLRA--KIVLPKVPK 315 Query: 432 KLNPLTNNKAMLKLNPYAAV 491 + NPL N AM+KLNPYA + Sbjct: 316 RANPLKNWAAMVKLNPYAKI 335 >UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Sclerotiniaceae|Rep: 60S ribosomal protein L4 - Sclerotinia sclerotiorum 1980 Length = 373 Score = 89.4 bits (212), Expect = 7e-17 Identities = 43/88 (48%), Positives = 58/88 (65%), Gaps = 3/88 (3%) Frame = +1 Query: 1 LRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFN---KDQGLTRAFRNIPGV 171 L+ + A D+ KV S++LRAGKGK+R RR QR+GPL++++ + L RAFRN+PGV Sbjct: 173 LKTVGALKDVEKVKDSRKLRAGKGKLRGRRHRQRRGPLVVYDGATDGKELVRAFRNLPGV 232 Query: 172 EXXXXXXXXXXXXAPGGHLGRFVIWTQS 255 E APGGHLGRF+IW+ S Sbjct: 233 ETCDVYSLNLLQLAPGGHLGRFIIWSSS 260 Score = 65.7 bits (153), Expect = 1e-09 Identities = 36/88 (40%), Positives = 53/88 (60%), Gaps = 3/88 (3%) Frame = +3 Query: 249 SVAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVI--R 422 S AF LD ++G+ PS KK+F LP ++ D+ RL+ S E++ V+RA + R Sbjct: 259 SSAFKALDNIYGTTTAPSALKKDFLLPSNVVSQADIGRLINSSELQSVIRAAKGSALTKR 318 Query: 423 A-TRKLNPLTNNKAMLKLNPYAAVLKEE 503 A +K NPL N + +L+LNPYAA +E Sbjct: 319 AGVQKKNPLLNKQVLLRLNPYAAGYSKE 346 >UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL4 - Streblomastix strix Length = 492 Score = 87.8 bits (208), Expect = 2e-16 Identities = 42/84 (50%), Positives = 55/84 (65%) Frame = +1 Query: 1 LRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXX 180 L LKA D+ +S+R+R G GK RNRR QR+G LI+ ++++GL AFRNI GV+ Sbjct: 171 LAALKASDDVKHSAESKRIRVGSGKARNRRYTQRRGVLIVHDQNEGLANAFRNISGVDIS 230 Query: 181 XXXXXXXXXXAPGGHLGRFVIWTQ 252 APGGHLGRF+IWT+ Sbjct: 231 NVXRLNIRDLAPGGHLGRFIIWTE 254 Score = 44.8 bits (101), Expect = 0.002 Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 6/78 (7%) Frame = +3 Query: 255 AFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRA---PNKRVIRA 425 A+ +LD L+G+ + K + P P + NTDL+R++ S ++ VL+A +K++I Sbjct: 256 AYKKLDKLYGTRFRTALLKNEYKHPTPSVTNTDLSRIIHSPTVQSVLKARGKQSKKIINV 315 Query: 426 TRKL---NPLTNNKAMLK 470 R L + L+ N A +K Sbjct: 316 RRNLLIASKLSQNNARIK 333 >UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium caudatum|Rep: Ribosomal protein L4 - Paramecium caudatum Length = 252 Score = 87.4 bits (207), Expect = 3e-16 Identities = 45/100 (45%), Positives = 60/100 (60%), Gaps = 1/100 (1%) Frame = +1 Query: 1 LRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLII-FNKDQGLTRAFRNIPGVEX 177 L+R A+ D+ KV ++ +RAG K R ++ RKGPL++ FN++ L +AFRN+PGVE Sbjct: 18 LKRFGAFEDVQKVVSTKTIRAGVSKSRGKKYRVRKGPLVVYFNENAKLLKAFRNVPGVEV 77 Query: 178 XXXXXXXXXXXAPGGHLGRFVIWTQSHSAGLTPYSGHGRH 297 APGG LGRFVIWTQS A L G R+ Sbjct: 78 VNVTRLNLLQLAPGGQLGRFVIWTQSAFANLDKLFGTYRY 117 Score = 65.3 bits (152), Expect = 1e-09 Identities = 32/78 (41%), Positives = 49/78 (62%), Gaps = 1/78 (1%) Frame = +3 Query: 255 AFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIR-KVLRAPNKRVIRATR 431 AF LD LFG+++ S K + L +P + N DL R++ S++++ KV A V+ + Sbjct: 104 AFANLDKLFGTYRYSSILKDGYQLLRPLLTNPDLARIINSNQVQEKVQAAKQTTVLHEVQ 163 Query: 432 KLNPLTNNKAMLKLNPYA 485 K NPL N+KA+ +LNPYA Sbjct: 164 KKNPLKNSKALDRLNPYA 181 >UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Oligohymenophorea|Rep: Ribosomal protein L4, putative - Paramecium tetraurelia Length = 406 Score = 85.4 bits (202), Expect = 1e-15 Identities = 45/100 (45%), Positives = 60/100 (60%), Gaps = 1/100 (1%) Frame = +1 Query: 1 LRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLII-FNKDQGLTRAFRNIPGVEX 177 L+R A+ D+ KV ++ +RAG K R ++ RKGPL++ FN++ L +AFRN+PGVE Sbjct: 172 LKRFGAFEDVQKVVSTKVVRAGISKQRGKKYRVRKGPLVVYFNENAKLLKAFRNVPGVEV 231 Query: 178 XXXXXXXXXXXAPGGHLGRFVIWTQSHSAGLTPYSGHGRH 297 APGG LGRFVIWTQS A L G R+ Sbjct: 232 VNVTRLNLLQLAPGGQLGRFVIWTQSAFAHLDKLFGTYRY 271 Score = 67.3 bits (157), Expect = 3e-10 Identities = 37/97 (38%), Positives = 56/97 (57%), Gaps = 1/97 (1%) Frame = +3 Query: 255 AFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIR-KVLRAPNKRVIRATR 431 AF LD LFG+++ S K + L +P + N DL R++ S++++ KV A +V+ + Sbjct: 258 AFAHLDKLFGTYRYASVLKDGYQLLRPLLTNPDLARIINSNQVQEKVQPAKTTKVLHDVQ 317 Query: 432 KLNPLTNNKAMLKLNPYAAVLKEESYLELRRRKNLKG 542 K NPL N KAM +LNPYA K+ + + N KG Sbjct: 318 KKNPLKNTKAMDRLNPYAK--KQRAAAVAAIKANTKG 352 >UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED: similar to ribosomal protein L4 - Canis familiaris Length = 248 Score = 84.6 bits (200), Expect = 2e-15 Identities = 40/77 (51%), Positives = 53/77 (68%), Gaps = 1/77 (1%) Frame = +3 Query: 252 VAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRV-IRAT 428 +AF +LD L+G+W + K N+NLP KM NTDL+R+LK I++ LRAP KR+ R Sbjct: 172 IAFCKLDDLYGTWPKAASLKSNYNLPMHKMLNTDLSRILKRPGIQRALRAPRKRIHRRVL 231 Query: 429 RKLNPLTNNKAMLKLNP 479 +K NPL N + MLKLNP Sbjct: 232 KKKNPLKNLRLMLKLNP 248 Score = 78.2 bits (184), Expect = 2e-13 Identities = 34/50 (68%), Positives = 43/50 (86%) Frame = +1 Query: 1 LRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRA 150 L++LKAW+DI KVY SQR+RAGKGKMRNRR IQR+G II+N+D G+ +A Sbjct: 112 LKKLKAWNDIKKVYASQRMRAGKGKMRNRRPIQRRGSCIIYNEDNGIIKA 161 >UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lamblia ATCC 50803|Rep: GLP_79_45017_44067 - Giardia lamblia ATCC 50803 Length = 316 Score = 82.2 bits (194), Expect = 1e-14 Identities = 38/82 (46%), Positives = 52/82 (63%) Frame = +1 Query: 25 DILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXX 204 D+ + S+ +RAG+GKMRNRR I RKGPL+I+N + + R FRN+PGV+ Sbjct: 167 DVERCKDSRHIRAGRGKMRNRRYITRKGPLVIYNTED-VARGFRNLPGVDLCHVSSIRLL 225 Query: 205 XXAPGGHLGRFVIWTQSHSAGL 270 APG H GR ++WT+S A L Sbjct: 226 ELAPGSHPGRLILWTKSAFASL 247 Score = 45.2 bits (102), Expect = 0.002 Identities = 19/62 (30%), Positives = 39/62 (62%) Frame = +3 Query: 309 KKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAA 488 K+N+ LP+ + TD+ R+L+SD ++K P + + RK++P ++ +A+ +L+P Sbjct: 254 KQNYTLPRSCITQTDIERILQSDAVQKTF-VPKRDPLVIERKVDPFSSKEALARLDPSGT 312 Query: 489 VL 494 V+ Sbjct: 313 VM 314 >UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, putative; n=5; Plasmodium|Rep: 60S ribosomal subunit protein L4/L1, putative - Plasmodium chabaudi Length = 411 Score = 74.9 bits (176), Expect = 2e-12 Identities = 34/76 (44%), Positives = 48/76 (63%) Frame = +1 Query: 25 DILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXX 204 ++ ++ KS +LRA GKMRNR+ GPLII++ D G+ +AFRNIPGV+ Sbjct: 179 EVNRLIKSXKLRARXGKMRNRKYKISNGPLIIYSXDSGIKKAFRNIPGVDLCNVTKLNLL 238 Query: 205 XXAPGGHLGRFVIWTQ 252 APGG +GR IW++ Sbjct: 239 KLAPGGSIGRLCIWSE 254 Score = 50.8 bits (116), Expect = 3e-05 Identities = 26/90 (28%), Positives = 48/90 (53%) Frame = +3 Query: 255 AFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRK 434 AF +LD ++G KKN+ LP+P + N D+ R++ SD+++ L + T+ Sbjct: 256 AFKKLDVIYGKTFQKYVTKKNYILPKPIVNNADIYRIINSDQVQASLLDKKSPCKKRTQN 315 Query: 435 LNPLTNNKAMLKLNPYAAVLKEESYLELRR 524 N LTN +LNP +L+ + ++++ Sbjct: 316 KNSLTNFAVRCRLNPAYKLLRALAVRKMKK 345 >UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3; Trichomonas vaginalis G3|Rep: Ribosomal protein, putative - Trichomonas vaginalis G3 Length = 370 Score = 74.1 bits (174), Expect = 3e-12 Identities = 32/85 (37%), Positives = 49/85 (57%) Frame = +1 Query: 1 LRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXX 180 L+++ + D+ +V R+ KGK R +KGPL+I+N+D+G+ +AFRNIPGVE Sbjct: 168 LKKVGVYGDVQRVLDGSVHRSSKGKFRRAAYKTKKGPLVIYNEDKGIVKAFRNIPGVETI 227 Query: 181 XXXXXXXXXXAPGGHLGRFVIWTQS 255 AP +GR +WT+S Sbjct: 228 SVKALALAKLAPAAQVGRLTVWTES 252 >UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9; Euryarchaeota|Rep: 50S ribosomal protein L4P - Archaeoglobus fulgidus Length = 252 Score = 74.1 bits (174), Expect = 3e-12 Identities = 31/84 (36%), Positives = 51/84 (60%) Frame = +1 Query: 4 RRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXX 183 R + ++D+ + + +R RAG+GKMR RR +++K L++ KD G+ +A +N+PGV+ Sbjct: 159 RAIGVYADVERAKERKRYRAGRGKMRGRRYVKKKSVLLVVGKDDGVVKAAKNLPGVDAVV 218 Query: 184 XXXXXXXXXAPGGHLGRFVIWTQS 255 APG H GR +WT+S Sbjct: 219 VKDLNVELLAPGCHPGRLTVWTKS 242 >UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n=4; Cryptosporidium|Rep: 60S ribosomal protein-like, putative - Cryptosporidium parvum Iowa II Length = 394 Score = 72.9 bits (171), Expect = 7e-12 Identities = 39/120 (32%), Positives = 61/120 (50%) Frame = +1 Query: 25 DILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXX 204 ++ ++ S +R GKGKMRNRRR+ GPL+++ +D G+ +A RNI GV+ Sbjct: 182 EMKRIESSIAIRCGKGKMRNRRRVCAVGPLVVYAEDNGIVKAMRNIKGVDTCSVERLNLL 241 Query: 205 XXAPGGHLGRFVIWTQSHSAGLTPYSGHGRHHQNKRRTSTCPNRRWPTLTSHVFSSLMRS 384 APGG GR I+T+ L G H + + T P P +T+ + ++ S Sbjct: 242 RLAPGGTFGRLTIFTKGAIKRLQEIYGSYTHGSSSKVGYTLPR---PAMTNADITRIINS 298 Score = 50.8 bits (116), Expect = 3e-05 Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 5/91 (5%) Frame = +3 Query: 255 AFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPN-----KRVI 419 A RL ++GS+ S K + LP+P M N D+TR++ S E++ VLR + Sbjct: 259 AIKRLQEIYGSYTHGSSSKVGYTLPRPAMTNADITRIINSTEVQSVLRPLRGFRCMGSMG 318 Query: 420 RATRKLNPLTNNKAMLKLNPYAAVLKEESYL 512 R+ K N LTN LNP L++ + L Sbjct: 319 RSKTKKNNLTNLTKRACLNPAYTSLRKSARL 349 >UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1; Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L4 - Encephalitozoon cuniculi Length = 335 Score = 72.5 bits (170), Expect = 9e-12 Identities = 38/85 (44%), Positives = 49/85 (57%) Frame = +1 Query: 1 LRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXX 180 LR L ++ +V KS+ +R GKGKMRNRR QRKG LI+ + + FRNI GV+ Sbjct: 168 LRNLNMTEELKRVEKSRGVRCGKGKMRNRRYTQRKGILIVHGESSEML-GFRNIRGVDQM 226 Query: 181 XXXXXXXXXXAPGGHLGRFVIWTQS 255 APGG GR +IWT+S Sbjct: 227 SIDSLDLLELAPGGVAGRLIIWTES 251 Score = 33.9 bits (74), Expect = 3.7 Identities = 16/50 (32%), Positives = 26/50 (52%) Frame = +3 Query: 255 AFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAP 404 AF +LD +FG + ++ F LP + + DL L SD ++ +L P Sbjct: 252 AFEKLDKIFGGVEREAELTPGFKLPNRIVTHDDLEELFYSDAVQAILDEP 301 >UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13; Euryarchaeota|Rep: 50S ribosomal protein L4P - Methanopyrus kandleri Length = 260 Score = 66.5 bits (155), Expect = 6e-10 Identities = 29/77 (37%), Positives = 45/77 (58%) Frame = +1 Query: 19 WSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXX 198 W+D+ + ++R+RAGKGK R RR ++ K LI+ ++D+G+ RN PGV+ Sbjct: 171 WADVERAKSNRRIRAGKGKRRGRRYVKPKSVLIVVDEDEGIKLGARNHPGVDVVEAMHLG 230 Query: 199 XXXXAPGGHLGRFVIWT 249 APG H GR ++T Sbjct: 231 VEHLAPGAHPGRLTVFT 247 >UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1; Leishmania major strain Friedlin|Rep: Ribosomal protein L1a, putative - Leishmania major strain Friedlin Length = 432 Score = 64.5 bits (150), Expect = 2e-09 Identities = 31/74 (41%), Positives = 47/74 (63%) Frame = +1 Query: 1 LRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXX 180 L+ + A D+ +V S+ +RAG+GKMRNRR + R+GP+++ ++G TRAFRNI G++ Sbjct: 170 LKAIAAIDDVNRVNDSREIRAGRGKMRNRRYVARRGPMLVMPNNKG-TRAFRNIFGLDLA 228 Query: 181 XXXXXXXXXXAPGG 222 APGG Sbjct: 229 NVSALTLLHLAPGG 242 >UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2; Euryarchaeota|Rep: 50S ribosomal protein L4P - Methanosphaera stadtmanae (strain DSM 3091) Length = 259 Score = 63.3 bits (147), Expect = 5e-09 Identities = 28/77 (36%), Positives = 45/77 (58%) Frame = +1 Query: 25 DILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXX 204 DI++ K +++++GKGK+R R+ KGPL++ D+G++ RN GV+ Sbjct: 169 DIVRAKKGRKIKSGKGKLRGRKYRTPKGPLVVVGNDRGISLGARNHAGVDVVEVNNINAE 228 Query: 205 XXAPGGHLGRFVIWTQS 255 APG H GR I+T+S Sbjct: 229 LLAPGTHAGRLTIYTKS 245 >UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3; Archaea|Rep: 50S ribosomal protein L4P - Sulfolobus solfataricus Length = 267 Score = 62.1 bits (144), Expect = 1e-08 Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 1/86 (1%) Frame = +1 Query: 1 LRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLII-FNKDQGLTRAFRNIPGVEX 177 L+++ + D+ +V + R+RAGKGKMR R+ + GPLII + + + +A RN+ GV+ Sbjct: 167 LKKIGVYDDVERVKERIRIRAGKGKMRGRKYKEPIGPLIIVHDSNSPIIKAARNLAGVDV 226 Query: 178 XXXXXXXXXXXAPGGHLGRFVIWTQS 255 APG H GR I+T+S Sbjct: 227 VNAKDVSVIHLAPGAHPGRLTIYTES 252 >UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular organisms|Rep: Ribosomal protein L4 - uncultured marine group II euryarchaeote DeepAnt-JyKC7 Length = 304 Score = 60.5 bits (140), Expect = 4e-08 Identities = 28/78 (35%), Positives = 43/78 (55%) Frame = +1 Query: 22 SDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXX 201 +D+ + + +RAGKG MR R+ K L++ ++ GL +A RNIPGV+ Sbjct: 221 ADLDRARTGRTIRAGKGTMRGRKYRTPKSILLVVSQTNGLAKAARNIPGVDIVVAKDLSA 280 Query: 202 XXXAPGGHLGRFVIWTQS 255 APGG GR +WT++ Sbjct: 281 EDLAPGGDAGRLTVWTKA 298 >UniRef50_UPI0000DA3D75 Cluster: PREDICTED: similar to ribosomal protein L4; n=3; Rattus norvegicus|Rep: PREDICTED: similar to ribosomal protein L4 - Rattus norvegicus Length = 140 Score = 59.3 bits (137), Expect = 9e-08 Identities = 30/68 (44%), Positives = 41/68 (60%) Frame = +3 Query: 336 KMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKEESYLE 515 KM N+DL+R+LK EI++ L+AP K + K NPLTN + MLKLNP A + + L Sbjct: 3 KMMNSDLSRILKIPEIQRALQAPCKEIQHRVSKKNPLTNLRIMLKLNPDAKTMHRNTILP 62 Query: 516 LRRRKNLK 539 R L+ Sbjct: 63 EARNHKLQ 70 >UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2; Cryptomonadaceae|Rep: 60s ribosomal protein L1 - Guillardia theta (Cryptomonas phi) Length = 255 Score = 58.4 bits (135), Expect = 2e-07 Identities = 28/76 (36%), Positives = 44/76 (57%) Frame = +1 Query: 22 SDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXX 201 + I++ ++L++GKGKMRNRR + GPL++F + ++ RNI ++ Sbjct: 172 NSIVRNKLKRKLKSGKGKMRNRRFKKPTGPLLVFKNN---LKSLRNIANIDCMKISALNL 228 Query: 202 XXXAPGGHLGRFVIWT 249 APGGHLGR IW+ Sbjct: 229 TKLAPGGHLGRLCIWS 244 >UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4; Thermoplasmatales|Rep: 50S ribosomal protein L4P - Thermoplasma acidophilum Length = 255 Score = 58.0 bits (134), Expect = 2e-07 Identities = 31/84 (36%), Positives = 46/84 (54%) Frame = +1 Query: 1 LRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXX 180 L+ L + DI + + + +RAG+GKMR RR Q K LI+ + +AFR++PGV+ Sbjct: 162 LKNLGVYEDIERSREGKHIRAGRGKMRGRRYKQPKSVLIVARNSSAM-KAFRSLPGVDIA 220 Query: 181 XXXXXXXXXXAPGGHLGRFVIWTQ 252 APGG GR I+T+ Sbjct: 221 SPNSLSIRKLAPGGVGGRLTIFTE 244 >UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9; Archaea|Rep: 50S ribosomal protein L4P - Pyrobaculum aerophilum Length = 283 Score = 58.0 bits (134), Expect = 2e-07 Identities = 30/81 (37%), Positives = 42/81 (51%), Gaps = 1/81 (1%) Frame = +1 Query: 10 LKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNK-DQGLTRAFRNIPGVEXXXX 186 L W D+ + + ++RAGKGKMR RR + K L++ + + L A RN PGV+ Sbjct: 191 LGLWPDVERAAEGVKIRAGKGKMRGRRYKEPKSVLVVVSDLNAPLIAAVRNFPGVDVVAV 250 Query: 187 XXXXXXXXAPGGHLGRFVIWT 249 APGG GR +WT Sbjct: 251 NNLNILVLAPGGVPGRLTLWT 271 >UniRef50_P60847 Cluster: 50S ribosomal protein L4P; n=1; Nanoarchaeum equitans|Rep: 50S ribosomal protein L4P - Nanoarchaeum equitans Length = 268 Score = 56.0 bits (129), Expect = 8e-07 Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 1/82 (1%) Frame = +1 Query: 1 LRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNK-DQGLTRAFRNIPGVEX 177 L +L ++ +VY+ +R RAGKGK R R I+RKGPLI+ N ++ L +A NIPG++ Sbjct: 172 LLKLGLEKELERVYEIKR-RAGKGKRRGRAYIERKGPLIVVNDYNEQLFKAVDNIPGLDI 230 Query: 178 XXXXXXXXXXXAPGGHLGRFVI 243 APG GR +I Sbjct: 231 EEVPNLNVELLAPGAKPGRLLI 252 >UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8; Archaea|Rep: 50S ribosomal protein L4P - Aeropyrum pernix Length = 272 Score = 53.6 bits (123), Expect = 4e-06 Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 1/84 (1%) Frame = +1 Query: 1 LRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQG-LTRAFRNIPGVEX 177 L + + D+L+ + +R AGKGKMR RR K L + + L A + +PGV+ Sbjct: 173 LESVGVYEDVLRAKEGKRYNAGKGKMRGRRYKVPKSVLFVLEDPRSPLALAVKGMPGVDV 232 Query: 178 XXXXXXXXXXXAPGGHLGRFVIWT 249 APGGH GR I+T Sbjct: 233 VTPTLLSVLHLAPGGHPGRLTIYT 256 >UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia bovis|Rep: Ribosomal protein RPL4A - Babesia bovis Length = 360 Score = 49.2 bits (112), Expect = 9e-05 Identities = 30/79 (37%), Positives = 40/79 (50%), Gaps = 2/79 (2%) Frame = +1 Query: 49 QRLRAGKGKMRNRRRIQRKGPLIIFNKD--QGLTRAFRNIPGVEXXXXXXXXXXXXAPGG 222 +R+ G+ R+ R+ + GPLII +G RAFRNIPGVE AP G Sbjct: 180 KRIDKVTGRARDGRKKRPVGPLIILRATAVEG-KRAFRNIPGVEVACVERLNLLKLAPAG 238 Query: 223 HLGRFVIWTQSHSAGLTPY 279 LGR +W++S L Y Sbjct: 239 ALGRLCVWSKSAFEALDDY 257 Score = 32.7 bits (71), Expect = 8.6 Identities = 14/37 (37%), Positives = 23/37 (62%) Frame = +3 Query: 324 LPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRK 434 +P + N DL+ L++S ++ LRAP + +ATRK Sbjct: 261 MPTKLLKNADLSALIESTPVQAALRAPREGTPKATRK 297 >UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1, putative; n=2; Theileria|Rep: 60S ribosomal subunit protein L4/L1, putative - Theileria annulata Length = 426 Score = 39.9 bits (89), Expect = 0.056 Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 4/63 (6%) Frame = +1 Query: 79 RNRRRIQRK--GPLIIFNKD--QGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIW 246 R +R+ +++ GPL++ +G RAFRNIPGV+ AP G LGR VI+ Sbjct: 187 RTKRKGKKRPVGPLVVMRSTAVEG-KRAFRNIPGVDVMSVEHMNLLKLAPAGTLGRLVIF 245 Query: 247 TQS 255 ++S Sbjct: 246 SKS 248 >UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarcula marismortui|Rep: 50S ribosomal protein L4P - Haloarcula marismortui (Halobacterium marismortui) Length = 246 Score = 37.5 bits (83), Expect = 0.30 Identities = 24/85 (28%), Positives = 42/85 (49%) Frame = +1 Query: 1 LRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXX 180 L L +DI + ++ +++AG+G R R+ +R ++ D+ T A RN+ G + Sbjct: 157 LEALDVHADIDRADET-KIKAGQGSARGRK-YRRPASILFVTSDEPSTAA-RNLAGADVA 213 Query: 181 XXXXXXXXXXAPGGHLGRFVIWTQS 255 APGG GR ++T+S Sbjct: 214 TASEVNTEDLAPGGAPGRLTVFTES 238 >UniRef50_Q4TDL2 Cluster: Chromosome undetermined SCAF6181, whole genome shotgun sequence; n=1; Tetraodon nigroviridis|Rep: Chromosome undetermined SCAF6181, whole genome shotgun sequence - Tetraodon nigroviridis (Green puffer) Length = 383 Score = 37.1 bits (82), Expect = 0.40 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = +1 Query: 244 WTQSHSAGLTPYSGHGRHHQNKRRTSTCPNR 336 W SH G T + +HHQ+ ++TS CP R Sbjct: 309 WIHSHRLGPTSFHSSAQHHQSAQKTSKCPTR 339 >UniRef50_Q23TC4 Cluster: Putative uncharacterized protein; n=1; Tetrahymena thermophila SB210|Rep: Putative uncharacterized protein - Tetrahymena thermophila SB210 Length = 966 Score = 35.1 bits (77), Expect = 1.6 Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 3/110 (2%) Frame = +3 Query: 330 QPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKEESY 509 Q K AN + RLL S+ + ++P+ ++ KLNP++ N + L LN + L ++S Sbjct: 330 QHKRANIQV-RLLSSEISKNQSQSPSNNILNQQNKLNPISTNTSQL-LNKQISQLNQKS- 386 Query: 510 LELRRRKNLKGFLLMPRRVD*SCLS---ENPRYERLRNYGEKETPRTFKE 650 L R + K + + S +N ++R R+ +K TF E Sbjct: 387 LTQRSQILSKSPISQAANISSMYFSPQNKNSIFQRDRSISQKNPKSTFSE 436 >UniRef50_Q7KKH3 Cluster: Protein SDA1 homolog; n=4; Coelomata|Rep: Protein SDA1 homolog - Drosophila melanogaster (Fruit fly) Length = 712 Score = 35.1 bits (77), Expect = 1.6 Identities = 31/116 (26%), Positives = 57/116 (49%), Gaps = 10/116 (8%) Frame = +3 Query: 303 KQKKNFNLPQPKMANTDL--TRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKA-MLKL 473 K+KK+ + K A +L TR+ ++ +++ A K+ + + RK PL ++A +KL Sbjct: 566 KEKKDMRILNQKEAAQELALTRIFTDEDFKRINAANLKKTVTSARK-RPLEQDRAEFVKL 624 Query: 474 NPYAAVLK-----EESYLELRR--RKNLKGFLLMPRRVD*SCLSENPRYERLRNYG 620 N + K +ES LE + R++ + F RV+ C N + +N+G Sbjct: 625 NSIEMIYKKRKHDKESRLETVQAGRQDRERFGWKDGRVNEHCSKTNREKRKTKNFG 680 >UniRef50_A5K648 Cluster: CW-type zinc finger domain-containing protein; n=1; Plasmodium vivax|Rep: CW-type zinc finger domain-containing protein - Plasmodium vivax Length = 3410 Score = 33.9 bits (74), Expect = 3.7 Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 1/101 (0%) Frame = +3 Query: 327 PQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPL-TNNKAMLKLNPYAAVLKEE 503 P + ++ L R+LKS + + P + R+ R L P+ ++N ++ K + Y + Sbjct: 1567 PNQRSSDNHLPRILKSKSLSNFEKRPYFHLDRSERSLLPISSSNMSIPKSSSYNRI-NSG 1625 Query: 504 SYLELRRRKNLKGFLLMPRRVD*SCLSENPRYERLRNYGEK 626 Y +LRR + G L+ R S + R L NY K Sbjct: 1626 DYFDLRRGEVASGHYLLKRNAMGSGGDHSMRDIFLSNYYAK 1666 >UniRef50_Q28ZB7 Cluster: GA20803-PA; n=1; Drosophila pseudoobscura|Rep: GA20803-PA - Drosophila pseudoobscura (Fruit fly) Length = 655 Score = 33.5 bits (73), Expect = 4.9 Identities = 30/123 (24%), Positives = 57/123 (46%), Gaps = 10/123 (8%) Frame = +3 Query: 282 GSWKTPSKQKKNFNLPQPKMANTDL--TRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNN 455 G W T + + + K A +L TR+ ++ +++ A K+ + +RK PL + Sbjct: 502 GQWVTVNHSDGDLKILNQKEAAQELALTRIFTDEDFKRINAANLKKTVTNSRK-RPLEQD 560 Query: 456 KA-MLKLNPYAAVLK-----EESYLELRR--RKNLKGFLLMPRRVD*SCLSENPRYERLR 611 +A +KLN + K +ES +E + R++ + F RV+ C N + + Sbjct: 561 RAEFVKLNSIEMIFKKRKHDKESRMETVQAGRQDRERFGWKDGRVNEHCSKTNSEKRKTK 620 Query: 612 NYG 620 N+G Sbjct: 621 NFG 623 >UniRef50_Q23DJ6 Cluster: Putative uncharacterized protein; n=1; Tetrahymena thermophila SB210|Rep: Putative uncharacterized protein - Tetrahymena thermophila SB210 Length = 1067 Score = 33.1 bits (72), Expect = 6.5 Identities = 19/72 (26%), Positives = 36/72 (50%) Frame = +3 Query: 321 NLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKE 500 NLP + + L+ + ++L ++R T+K+N + NNK +LK V + Sbjct: 576 NLPLVSNQASAINIKLQEKDFYELLNLESERAAITTKKINRIHNNKMVLKSAFEVNVQQS 635 Query: 501 ESYLELRRRKNL 536 + + L++ KNL Sbjct: 636 DEVILLKQEKNL 647 >UniRef50_A4QS15 Cluster: Putative uncharacterized protein; n=2; Magnaporthe grisea|Rep: Putative uncharacterized protein - Magnaporthe grisea (Rice blast fungus) (Pyricularia grisea) Length = 1453 Score = 33.1 bits (72), Expect = 6.5 Identities = 15/33 (45%), Positives = 22/33 (66%) Frame = +3 Query: 210 GSGRPSWTFRHLDSVAFGRLDPLFGSWKTPSKQ 308 GSG P++ RH D++ F DP FG+ KTP ++ Sbjct: 846 GSGIPAFESRHKDTIKFYH-DPRFGNLKTPEQR 877 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 640,723,828 Number of Sequences: 1657284 Number of extensions: 12471051 Number of successful extensions: 33375 Number of sequences better than 10.0: 40 Number of HSP's better than 10.0 without gapping: 32332 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 33347 length of database: 575,637,011 effective HSP length: 98 effective length of database: 413,223,179 effective search space used: 53305790091 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -