Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30634
(387 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC062635-1|AAH62635.1| 1204|Homo sapiens exportin 5 protein. 50 2e-06
BC009969-1|AAH09969.2| 929|Homo sapiens XPO5 protein protein. 50 2e-06
BC008347-1|AAH08347.1| 610|Homo sapiens Unknown (protein for IM... 50 2e-06
BC000129-1|AAH00129.1| 280|Homo sapiens XPO5 protein protein. 50 2e-06
AL355802-23|CAI42640.1| 1204|Homo sapiens exportin 5 protein. 50 2e-06
AL355802-21|CAI42638.1| 700|Homo sapiens exportin 5 protein. 50 2e-06
AK022718-1|BAB14200.1| 668|Homo sapiens protein ( Homo sapiens ... 50 2e-06
AF298880-1|AAG17907.1| 1204|Homo sapiens exportin 5 protein. 50 2e-06
AF271159-1|AAG53603.1| 1204|Homo sapiens RANBP21 protein. 50 2e-06
AB033117-1|BAA86605.2| 1254|Homo sapiens KIAA1291 protein protein. 50 2e-06
AK001195-1|BAA91547.1| 280|Homo sapiens protein ( Homo sapiens ... 49 6e-06
AF091395-1|AAC43042.1| 3038|Homo sapiens Trio isoform protein. 29 6.9
AB209754-1|BAD92991.1| 2202|Homo sapiens triple functional domai... 29 6.9
>BC062635-1|AAH62635.1| 1204|Homo sapiens exportin 5 protein.
Length = 1204
Score = 50.4 bits (115), Expect = 2e-06
Identities = 26/75 (34%), Positives = 45/75 (60%)
Frame = +2
Query: 2 ETLRPQFPNIVNVLRAIPDVDAHDLQRLEDKLANNTGKPSKIDKSKRDLFKKITSKLIGR 181
E LRP++ I V+ IP++ L + + KL N + + DK ++D FK++ + IG+
Sbjct: 1102 EALRPRYLEIRAVMEQIPEIQKDSLDQFDCKLLNPSLQ-KVADKRRKDQFKRLIAGCIGK 1160
Query: 182 NVGQLFKKEVFIVDL 226
+G+ F+KEV I +L
Sbjct: 1161 PLGEQFRKEVHIKNL 1175
>BC009969-1|AAH09969.2| 929|Homo sapiens XPO5 protein protein.
Length = 929
Score = 50.4 bits (115), Expect = 2e-06
Identities = 26/75 (34%), Positives = 45/75 (60%)
Frame = +2
Query: 2 ETLRPQFPNIVNVLRAIPDVDAHDLQRLEDKLANNTGKPSKIDKSKRDLFKKITSKLIGR 181
E LRP++ I V+ IP++ L + + KL N + + DK ++D FK++ + IG+
Sbjct: 827 EALRPRYLEIRAVMEQIPEIQKDSLDQFDCKLLNPSLQ-KVADKRRKDQFKRLIAGCIGK 885
Query: 182 NVGQLFKKEVFIVDL 226
+G+ F+KEV I +L
Sbjct: 886 PLGEQFRKEVHIKNL 900
>BC008347-1|AAH08347.1| 610|Homo sapiens Unknown (protein for
IMAGE:3532513) protein.
Length = 610
Score = 50.4 bits (115), Expect = 2e-06
Identities = 26/75 (34%), Positives = 45/75 (60%)
Frame = +2
Query: 2 ETLRPQFPNIVNVLRAIPDVDAHDLQRLEDKLANNTGKPSKIDKSKRDLFKKITSKLIGR 181
E LRP++ I V+ IP++ L + + KL N + + DK ++D FK++ + IG+
Sbjct: 508 EALRPRYLEIRAVMEQIPEIQKDSLDQFDCKLLNPSLQ-KVADKRRKDQFKRLIAGCIGK 566
Query: 182 NVGQLFKKEVFIVDL 226
+G+ F+KEV I +L
Sbjct: 567 PLGEQFRKEVHIKNL 581
>BC000129-1|AAH00129.1| 280|Homo sapiens XPO5 protein protein.
Length = 280
Score = 50.4 bits (115), Expect = 2e-06
Identities = 26/75 (34%), Positives = 45/75 (60%)
Frame = +2
Query: 2 ETLRPQFPNIVNVLRAIPDVDAHDLQRLEDKLANNTGKPSKIDKSKRDLFKKITSKLIGR 181
E LRP++ I V+ IP++ L + + KL N + + DK ++D FK++ + IG+
Sbjct: 178 EALRPRYLEIRAVMEQIPEIQKDSLDQFDCKLLNPSLQ-KVADKRRKDQFKRLIAGCIGK 236
Query: 182 NVGQLFKKEVFIVDL 226
+G+ F+KEV I +L
Sbjct: 237 PLGEQFRKEVHIKNL 251
>AL355802-23|CAI42640.1| 1204|Homo sapiens exportin 5 protein.
Length = 1204
Score = 50.4 bits (115), Expect = 2e-06
Identities = 26/75 (34%), Positives = 45/75 (60%)
Frame = +2
Query: 2 ETLRPQFPNIVNVLRAIPDVDAHDLQRLEDKLANNTGKPSKIDKSKRDLFKKITSKLIGR 181
E LRP++ I V+ IP++ L + + KL N + + DK ++D FK++ + IG+
Sbjct: 1102 EALRPRYLEIRAVMEQIPEIQKDSLDQFDCKLLNPSLQ-KVADKRRKDQFKRLIAGCIGK 1160
Query: 182 NVGQLFKKEVFIVDL 226
+G+ F+KEV I +L
Sbjct: 1161 PLGEQFRKEVHIKNL 1175
>AL355802-21|CAI42638.1| 700|Homo sapiens exportin 5 protein.
Length = 700
Score = 50.4 bits (115), Expect = 2e-06
Identities = 26/75 (34%), Positives = 45/75 (60%)
Frame = +2
Query: 2 ETLRPQFPNIVNVLRAIPDVDAHDLQRLEDKLANNTGKPSKIDKSKRDLFKKITSKLIGR 181
E LRP++ I V+ IP++ L + + KL N + + DK ++D FK++ + IG+
Sbjct: 621 EALRPRYLEIRAVMEQIPEIQKDSLDQFDCKLLNPSLQ-KVADKRRKDQFKRLIAGCIGK 679
Query: 182 NVGQLFKKEVFIVDL 226
+G+ F+KEV I +L
Sbjct: 680 PLGEQFRKEVHIKNL 694
>AK022718-1|BAB14200.1| 668|Homo sapiens protein ( Homo sapiens
cDNA FLJ12656 fis, clone NT2RM4002128. ).
Length = 668
Score = 50.4 bits (115), Expect = 2e-06
Identities = 26/75 (34%), Positives = 45/75 (60%)
Frame = +2
Query: 2 ETLRPQFPNIVNVLRAIPDVDAHDLQRLEDKLANNTGKPSKIDKSKRDLFKKITSKLIGR 181
E LRP++ I V+ IP++ L + + KL N + + DK ++D FK++ + IG+
Sbjct: 566 EALRPRYLEIRAVMEQIPEIQKDSLDQFDCKLLNPSLQ-KVADKRRKDQFKRLIAGCIGK 624
Query: 182 NVGQLFKKEVFIVDL 226
+G+ F+KEV I +L
Sbjct: 625 PLGEQFRKEVHIKNL 639
>AF298880-1|AAG17907.1| 1204|Homo sapiens exportin 5 protein.
Length = 1204
Score = 50.4 bits (115), Expect = 2e-06
Identities = 26/75 (34%), Positives = 45/75 (60%)
Frame = +2
Query: 2 ETLRPQFPNIVNVLRAIPDVDAHDLQRLEDKLANNTGKPSKIDKSKRDLFKKITSKLIGR 181
E LRP++ I V+ IP++ L + + KL N + + DK ++D FK++ + IG+
Sbjct: 1102 EALRPRYLEIRAVMEQIPEIQKDSLDQFDCKLLNPSLQ-KVADKRRKDQFKRLIAGCIGK 1160
Query: 182 NVGQLFKKEVFIVDL 226
+G+ F+KEV I +L
Sbjct: 1161 PLGEQFRKEVHIKNL 1175
>AF271159-1|AAG53603.1| 1204|Homo sapiens RANBP21 protein.
Length = 1204
Score = 50.4 bits (115), Expect = 2e-06
Identities = 26/75 (34%), Positives = 45/75 (60%)
Frame = +2
Query: 2 ETLRPQFPNIVNVLRAIPDVDAHDLQRLEDKLANNTGKPSKIDKSKRDLFKKITSKLIGR 181
E LRP++ I V+ IP++ L + + KL N + + DK ++D FK++ + IG+
Sbjct: 1102 EALRPRYLEIRAVMEQIPEIQKDSLDQFDCKLLNPSLQ-KVADKRRKDQFKRLIAGCIGK 1160
Query: 182 NVGQLFKKEVFIVDL 226
+G+ F+KEV I +L
Sbjct: 1161 PLGEQFRKEVHIKNL 1175
>AB033117-1|BAA86605.2| 1254|Homo sapiens KIAA1291 protein protein.
Length = 1254
Score = 50.4 bits (115), Expect = 2e-06
Identities = 26/75 (34%), Positives = 45/75 (60%)
Frame = +2
Query: 2 ETLRPQFPNIVNVLRAIPDVDAHDLQRLEDKLANNTGKPSKIDKSKRDLFKKITSKLIGR 181
E LRP++ I V+ IP++ L + + KL N + + DK ++D FK++ + IG+
Sbjct: 1152 EALRPRYLEIRAVMEQIPEIQKDSLDQFDCKLLNPSLQ-KVADKRRKDQFKRLIAGCIGK 1210
Query: 182 NVGQLFKKEVFIVDL 226
+G+ F+KEV I +L
Sbjct: 1211 PLGEQFRKEVHIKNL 1225
>AK001195-1|BAA91547.1| 280|Homo sapiens protein ( Homo sapiens
cDNA FLJ10333 fis, clone NT2RM2000639. ).
Length = 280
Score = 48.8 bits (111), Expect = 6e-06
Identities = 25/75 (33%), Positives = 45/75 (60%)
Frame = +2
Query: 2 ETLRPQFPNIVNVLRAIPDVDAHDLQRLEDKLANNTGKPSKIDKSKRDLFKKITSKLIGR 181
E LRP++ I V+ IP++ L + + KL N + + DK ++D F+++ + IG+
Sbjct: 178 EALRPRYLEIRAVMEQIPEIQKDSLDQFDCKLLNPSLQ-KVADKRRKDQFERLIAGCIGK 236
Query: 182 NVGQLFKKEVFIVDL 226
+G+ F+KEV I +L
Sbjct: 237 PLGEQFRKEVHIKNL 251
>AF091395-1|AAC43042.1| 3038|Homo sapiens Trio isoform protein.
Length = 3038
Score = 28.7 bits (61), Expect = 6.9
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +1
Query: 187 GSAVQEGSVHSGSAHGPHGSPADDDTAPPRLDLLFAHTPP 306
G A GS HSG G+P+ + P R+ H PP
Sbjct: 2252 GGAPSGGSGHSGGPSSCGGAPSTSRSRPSRIPQPVRHHPP 2291
>AB209754-1|BAD92991.1| 2202|Homo sapiens triple functional domain
(PTPRF interacting) variant protein.
Length = 2202
Score = 28.7 bits (61), Expect = 6.9
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +1
Query: 187 GSAVQEGSVHSGSAHGPHGSPADDDTAPPRLDLLFAHTPP 306
G A GS HSG G+P+ + P R+ H PP
Sbjct: 1950 GGAPSGGSGHSGGPSSCGGAPSTSRSRPSRIPQPVRHHPP 1989
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,603,123
Number of Sequences: 237096
Number of extensions: 982299
Number of successful extensions: 2513
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2379
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2495
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2641190740
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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