Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30633
         (729 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    30   0.022
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    30   0.022
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       23   1.9  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   3.3  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    22   5.8  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    22   5.8  

>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 29.9 bits (64), Expect = 0.022
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = +3

Query: 12  LTCCIYY*SSYQYFICTVLIVTLNMSVVGNYFLTILME 125
           LT  I + +SYQY   T  +  + M+V+  YF+ +LME
Sbjct: 158 LTVTIIFFASYQYGTKTYSLFIVFMTVILPYFINLLME 195


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 29.9 bits (64), Expect = 0.022
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = +3

Query: 12  LTCCIYY*SSYQYFICTVLIVTLNMSVVGNYFLTILME 125
           LT  I + +SYQY   T  +  + M+V+  YF+ +LME
Sbjct: 158 LTVTIIFFASYQYGTKTYSLFIVFMTVILPYFINLLME 195


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +3

Query: 219 DKI*FPITLLMMYSNNNKHPENSSRNSIYS 308
           DK+  PI   ++Y NN + P N +R+  YS
Sbjct: 40  DKLHHPIHQTVIYHNNPRDP-NRARSVSYS 68


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = +3

Query: 6   VLLTCCIYY*SSYQYFICTVLIVTLNM 86
           +LL C  Y+   +  F C  +I T+++
Sbjct: 253 LLLVCIYYFYYMHLLFCCAFIIFTMHL 279


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory
          receptor candidate 18 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +3

Query: 6  VLLTCCIYY*SSYQYFICT 62
          +L T CIY  S Y +FI T
Sbjct: 38 ILGTTCIYLTSLYIWFILT 56


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory
          receptor candidate 17 protein.
          Length = 372

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +3

Query: 6  VLLTCCIYY*SSYQYFICT 62
          +L T CIY  S Y +FI T
Sbjct: 38 ILGTTCIYLTSLYIWFILT 56


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,496
Number of Sequences: 336
Number of extensions: 3552
Number of successful extensions: 15
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)