Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30633
         (729 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC053509-1|AAH53509.1|  656|Homo sapiens 5,10-methylenetetrahydr...    33   0.79 
AY338232-1|AAP88033.1|  656|Homo sapiens 5,10-methylenetetrahydr...    33   0.79 
AL953897-14|CAI15889.1|  697|Homo sapiens 5,10-methylenetetrahyd...    33   0.79 
AL953897-10|CAI15885.1|  656|Homo sapiens 5,10-methylenetetrahyd...    33   0.79 
AJ237672-1|CAB41971.1|  679|Homo sapiens methylenetetrahydrofola...    33   0.79 
AF105987-1|AAD17965.1|  656|Homo sapiens methylenetetrahydrofola...    33   0.79 
AB209113-1|BAD92350.1|  672|Homo sapiens 5,10-methylenetetrahydr...    33   0.79 

>BC053509-1|AAH53509.1|  656|Homo sapiens
           5,10-methylenetetrahydrofolate reductase (NADPH)
           protein.
          Length = 656

 Score = 33.5 bits (73), Expect = 0.79
 Identities = 16/45 (35%), Positives = 25/45 (55%)
 Frame = -2

Query: 548 IVDVFPEMRLFFILLKSSNAAGLTCFLIPGISRYPVSTNHILEQI 414
           I  +F E   FF  +K+    G+TC ++PGI  +P+   H L Q+
Sbjct: 226 ITQLFFEADTFFRFVKACTDMGITCPIVPGI--FPIQGYHSLRQL 268


>AY338232-1|AAP88033.1|  656|Homo sapiens
           5,10-methylenetetrahydrofolate reductase (NADPH)
           protein.
          Length = 656

 Score = 33.5 bits (73), Expect = 0.79
 Identities = 16/45 (35%), Positives = 25/45 (55%)
 Frame = -2

Query: 548 IVDVFPEMRLFFILLKSSNAAGLTCFLIPGISRYPVSTNHILEQI 414
           I  +F E   FF  +K+    G+TC ++PGI  +P+   H L Q+
Sbjct: 226 ITQLFFEADTFFRFVKACTDMGITCPIVPGI--FPIQGYHSLRQL 268


>AL953897-14|CAI15889.1|  697|Homo sapiens
           5,10-methylenetetrahydrofolate reductase (NADPH)
           protein.
          Length = 697

 Score = 33.5 bits (73), Expect = 0.79
 Identities = 16/45 (35%), Positives = 25/45 (55%)
 Frame = -2

Query: 548 IVDVFPEMRLFFILLKSSNAAGLTCFLIPGISRYPVSTNHILEQI 414
           I  +F E   FF  +K+    G+TC ++PGI  +P+   H L Q+
Sbjct: 267 ITQLFFEADTFFRFVKACTDMGITCPIVPGI--FPIQGYHSLRQL 309


>AL953897-10|CAI15885.1|  656|Homo sapiens
           5,10-methylenetetrahydrofolate reductase (NADPH)
           protein.
          Length = 656

 Score = 33.5 bits (73), Expect = 0.79
 Identities = 16/45 (35%), Positives = 25/45 (55%)
 Frame = -2

Query: 548 IVDVFPEMRLFFILLKSSNAAGLTCFLIPGISRYPVSTNHILEQI 414
           I  +F E   FF  +K+    G+TC ++PGI  +P+   H L Q+
Sbjct: 226 ITQLFFEADTFFRFVKACTDMGITCPIVPGI--FPIQGYHSLRQL 268


>AJ237672-1|CAB41971.1|  679|Homo sapiens methylenetetrahydrofolate
           reductase protein.
          Length = 679

 Score = 33.5 bits (73), Expect = 0.79
 Identities = 16/45 (35%), Positives = 25/45 (55%)
 Frame = -2

Query: 548 IVDVFPEMRLFFILLKSSNAAGLTCFLIPGISRYPVSTNHILEQI 414
           I  +F E   FF  +K+    G+TC ++PGI  +P+   H L Q+
Sbjct: 249 ITQLFFEADTFFRFVKACTDMGITCPIVPGI--FPIQGYHSLRQL 291


>AF105987-1|AAD17965.1|  656|Homo sapiens methylenetetrahydrofolate
           reductase protein.
          Length = 656

 Score = 33.5 bits (73), Expect = 0.79
 Identities = 16/45 (35%), Positives = 25/45 (55%)
 Frame = -2

Query: 548 IVDVFPEMRLFFILLKSSNAAGLTCFLIPGISRYPVSTNHILEQI 414
           I  +F E   FF  +K+    G+TC ++PGI  +P+   H L Q+
Sbjct: 226 ITQLFFEADTFFRFVKACTDMGITCPIVPGI--FPIQGYHSLRQL 268


>AB209113-1|BAD92350.1|  672|Homo sapiens
           5,10-methylenetetrahydrofolate reductase (NADPH) variant
           protein.
          Length = 672

 Score = 33.5 bits (73), Expect = 0.79
 Identities = 16/45 (35%), Positives = 25/45 (55%)
 Frame = -2

Query: 548 IVDVFPEMRLFFILLKSSNAAGLTCFLIPGISRYPVSTNHILEQI 414
           I  +F E   FF  +K+    G+TC ++PGI  +P+   H L Q+
Sbjct: 256 ITQLFFEADTFFRFVKACTDMGITCPIVPGI--FPIQGYHSLRQL 298


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,675,074
Number of Sequences: 237096
Number of extensions: 1820387
Number of successful extensions: 7090
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7046
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7090
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8623170556
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)