Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30633
(729 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY113601-1|AAM29606.1| 438|Drosophila melanogaster RH54244p pro... 42 3e-05
AE014134-2553|AAF53432.3| 438|Drosophila melanogaster CG4182-PA... 42 3e-05
BT003613-1|AAO39616.1| 447|Drosophila melanogaster GH16592p pro... 45 9e-05
AE014297-1605|AAF54884.1| 429|Drosophila melanogaster CG18550-P... 45 9e-05
AY060728-1|AAL28276.1| 452|Drosophila melanogaster GH17451p pro... 42 7e-04
AE014297-1606|AAF54885.2| 452|Drosophila melanogaster CG8063-PA... 42 7e-04
AY071114-1|AAL48736.1| 358|Drosophila melanogaster RE16722p pro... 30 3.7
AE014135-44|AAF59358.2| 463|Drosophila melanogaster CG1629-PA p... 30 3.7
X04427-1|CAA28024.1| 541|Drosophila melanogaster yellow gene pr... 29 6.5
AL023873-2|CAA19640.1| 541|Drosophila melanogaster EG:125H10.2,... 29 6.5
AE014298-26|AAF45497.1| 541|Drosophila melanogaster CG3757-PA p... 29 6.5
>AY113601-1|AAM29606.1| 438|Drosophila melanogaster RH54244p
protein.
Length = 438
Score = 42.3 bits (95), Expect(2) = 3e-05
Identities = 17/41 (41%), Positives = 27/41 (65%)
Frame = +1
Query: 385 LISVFTMVEAICSRIWFVDTGYLDIPGIRKQVKPAALLLFN 507
+IS F + +C R+W +DTG DI G KQ+ P ++L+F+
Sbjct: 147 VISTFRIQVDVCDRLWVLDTGLADILGSPKQITPNSILVFD 187
Score = 23.8 bits (49), Expect(2) = 3e-05
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 304 TVNYINNFDNEKELVLRPFPNANVGKELISV 396
T+NYI+ EK L P+P+ K I V
Sbjct: 86 TLNYIDINSTEKSPKLHPYPSWEANKLPIDV 116
>AE014134-2553|AAF53432.3| 438|Drosophila melanogaster CG4182-PA
protein.
Length = 438
Score = 42.3 bits (95), Expect(2) = 3e-05
Identities = 17/41 (41%), Positives = 27/41 (65%)
Frame = +1
Query: 385 LISVFTMVEAICSRIWFVDTGYLDIPGIRKQVKPAALLLFN 507
+IS F + +C R+W +DTG DI G KQ+ P ++L+F+
Sbjct: 147 VISTFRIQVDVCDRLWVLDTGLADILGSPKQITPNSILVFD 187
Score = 23.8 bits (49), Expect(2) = 3e-05
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 304 TVNYINNFDNEKELVLRPFPNANVGKELISV 396
T+NYI+ EK L P+P+ K I V
Sbjct: 86 TLNYIDINSTEKSPKLHPYPSWEANKLPIDV 116
>BT003613-1|AAO39616.1| 447|Drosophila melanogaster GH16592p
protein.
Length = 447
Score = 45.2 bits (102), Expect = 9e-05
Identities = 26/83 (31%), Positives = 47/83 (56%), Gaps = 8/83 (9%)
Frame = +1
Query: 304 TVNYINNFDN--EKELVLRPFPNANVGK------ELISVFTMVEAICSRIWFVDTGYLDI 459
T+NYI+ + + LR +PN V + L+SV+ +C R+WFVDTG L+
Sbjct: 122 TLNYIDLAKDGWSQSPHLRAYPNLAVNQYNASEQNLVSVYRTSVDVCGRLWFVDTGMLEF 181
Query: 460 PGIRKQVKPAALLLFNNMKNNRI 528
P R+Q++ ++ + ++ N+R+
Sbjct: 182 PNNRQQIRHPSIWVI-DLANDRL 203
>AE014297-1605|AAF54884.1| 429|Drosophila melanogaster CG18550-PA
protein.
Length = 429
Score = 45.2 bits (102), Expect = 9e-05
Identities = 26/83 (31%), Positives = 47/83 (56%), Gaps = 8/83 (9%)
Frame = +1
Query: 304 TVNYINNFDN--EKELVLRPFPNANVGK------ELISVFTMVEAICSRIWFVDTGYLDI 459
T+NYI+ + + LR +PN V + L+SV+ +C R+WFVDTG L+
Sbjct: 104 TLNYIDLAKDGWSQSPHLRAYPNLAVNQYNASEQNLVSVYRTSVDVCGRLWFVDTGMLEF 163
Query: 460 PGIRKQVKPAALLLFNNMKNNRI 528
P R+Q++ ++ + ++ N+R+
Sbjct: 164 PNNRQQIRHPSIWVI-DLANDRL 185
>AY060728-1|AAL28276.1| 452|Drosophila melanogaster GH17451p
protein.
Length = 452
Score = 42.3 bits (95), Expect = 7e-04
Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 9/69 (13%)
Frame = +1
Query: 304 TVNYINNFDN--EKELVLRPFPNA-----NVGKE-LISVF-TMVEAICSRIWFVDTGYLD 456
T+NYI+ ++ + LR +PN N E L+SV+ T V+A C R+WF+DTG L+
Sbjct: 127 TLNYIDLAEDGSNRSPKLRAYPNFALNQFNASAENLVSVYRTSVDA-CQRLWFIDTGMLE 185
Query: 457 IPGIRKQVK 483
P R+Q++
Sbjct: 186 YPNNRQQIR 194
>AE014297-1606|AAF54885.2| 452|Drosophila melanogaster CG8063-PA
protein.
Length = 452
Score = 42.3 bits (95), Expect = 7e-04
Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 9/69 (13%)
Frame = +1
Query: 304 TVNYINNFDN--EKELVLRPFPNA-----NVGKE-LISVF-TMVEAICSRIWFVDTGYLD 456
T+NYI+ ++ + LR +PN N E L+SV+ T V+A C R+WF+DTG L+
Sbjct: 127 TLNYIDLAEDGSNRSPKLRAYPNFALNQFNASAENLVSVYRTSVDA-CQRLWFIDTGMLE 185
Query: 457 IPGIRKQVK 483
P R+Q++
Sbjct: 186 YPNNRQQIR 194
>AY071114-1|AAL48736.1| 358|Drosophila melanogaster RE16722p
protein.
Length = 358
Score = 29.9 bits (64), Expect = 3.7
Identities = 13/49 (26%), Positives = 26/49 (53%)
Frame = +1
Query: 361 PNANVGKELISVFTMVEAICSRIWFVDTGYLDIPGIRKQVKPAALLLFN 507
PN +L+SV+ C RIW +D+G ++ Q+ P +++++
Sbjct: 139 PNNPDCSKLMSVYRTAVDRCDRIWLIDSGIVNATINLNQICPPKIVVYD 187
>AE014135-44|AAF59358.2| 463|Drosophila melanogaster CG1629-PA
protein.
Length = 463
Score = 29.9 bits (64), Expect = 3.7
Identities = 13/49 (26%), Positives = 26/49 (53%)
Frame = +1
Query: 361 PNANVGKELISVFTMVEAICSRIWFVDTGYLDIPGIRKQVKPAALLLFN 507
PN +L+SV+ C RIW +D+G ++ Q+ P +++++
Sbjct: 139 PNNPDCSKLMSVYRTAVDRCDRIWLIDSGIVNATINLNQICPPKIVVYD 187
>X04427-1|CAA28024.1| 541|Drosophila melanogaster yellow gene
protein.
Length = 541
Score = 29.1 bits (62), Expect = 6.5
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 7/82 (8%)
Frame = +1
Query: 304 TVNYIN---NFDNEKELVLRPFPNANVGKELISVFTMVEAI----CSRIWFVDTGYLDIP 462
T+ YIN + EL+ P +N + + T I C R+W +DTG + I
Sbjct: 84 TLTYINMDRSLTGSPELIPYPDWRSNTAGDCANSITTAYRIKVDECGRLWVLDTGTVGIG 143
Query: 463 GIRKQVKPAALLLFNNMKNNRI 528
P A+ +F+ + RI
Sbjct: 144 NTTTNPCPYAVNVFDLTTDTRI 165
>AL023873-2|CAA19640.1| 541|Drosophila melanogaster
EG:125H10.2,FBgn0004034;y protein.
Length = 541
Score = 29.1 bits (62), Expect = 6.5
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 7/82 (8%)
Frame = +1
Query: 304 TVNYIN---NFDNEKELVLRPFPNANVGKELISVFTMVEAI----CSRIWFVDTGYLDIP 462
T+ YIN + EL+ P +N + + T I C R+W +DTG + I
Sbjct: 84 TLTYINMDRSLTGSPELIPYPDWRSNTAGDCANSITTAYRIKVDECGRLWVLDTGTVGIG 143
Query: 463 GIRKQVKPAALLLFNNMKNNRI 528
P A+ +F+ + RI
Sbjct: 144 NTTTNPCPYAVNVFDLTTDTRI 165
>AE014298-26|AAF45497.1| 541|Drosophila melanogaster CG3757-PA
protein.
Length = 541
Score = 29.1 bits (62), Expect = 6.5
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 7/82 (8%)
Frame = +1
Query: 304 TVNYIN---NFDNEKELVLRPFPNANVGKELISVFTMVEAI----CSRIWFVDTGYLDIP 462
T+ YIN + EL+ P +N + + T I C R+W +DTG + I
Sbjct: 84 TLTYINMDRSLTGSPELIPYPDWRSNTAGDCANSITTAYRIKVDECGRLWVLDTGTVGIG 143
Query: 463 GIRKQVKPAALLLFNNMKNNRI 528
P A+ +F+ + RI
Sbjct: 144 NTTTNPCPYAVNVFDLTTDTRI 165
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,056,424
Number of Sequences: 53049
Number of extensions: 568006
Number of successful extensions: 1280
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1242
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1280
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3273062859
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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