Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30631
         (570 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT030448-1|ABP87890.1|  188|Drosophila melanogaster IP16807p pro...   133   2e-31
AY113554-1|AAM29559.1|  188|Drosophila melanogaster RH01814p pro...   133   2e-31
AE014296-1212|AAF50596.1|  188|Drosophila melanogaster CG8615-PA...   133   2e-31
AE014297-754|AAF54238.1|  819|Drosophila melanogaster CG11718-PA...    31   1.1  
AE014296-161|AAF47434.1|  841|Drosophila melanogaster CG13908-PA...    30   2.5  
U82539-1|AAB71337.1|  214|Drosophila melanogaster arrowhead prot...    29   4.4  
BT025230-1|ABF17921.1|  275|Drosophila melanogaster FI01007p pro...    29   5.8  
AY071197-1|AAL48819.1|  275|Drosophila melanogaster RE24382p pro...    29   5.8  
AE014296-705|AAF47800.2|  214|Drosophila melanogaster CG1072-PA,...    29   5.8  
AE014296-704|AAN11572.1|  275|Drosophila melanogaster CG1072-PB,...    29   5.8  
AY113578-1|AAM29583.1|  373|Drosophila melanogaster RH30783p pro...    28   7.7  
AE014134-2987|AAF53717.1|  373|Drosophila melanogaster CG17321-P...    28   7.7  
AE014134-887|AAZ66448.1| 9606|Drosophila melanogaster CG33715-PE...    28   7.7  

>BT030448-1|ABP87890.1|  188|Drosophila melanogaster IP16807p
           protein.
          Length = 188

 Score =  133 bits (321), Expect = 2e-31
 Identities = 60/90 (66%), Positives = 73/90 (81%)
 Frame = +3

Query: 243 GDSHNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQR 422
           G   +D RL  +PK+TV ALHVT+ AR RIL AGGE+LTFDQLALR+PTGK T+L+QG+R
Sbjct: 84  GTVTDDARLLVVPKLTVCALHVTQTARERILKAGGEVLTFDQLALRSPTGKNTLLLQGRR 143

Query: 423 NAREAVRHFGPAPGAPRSHTKPYVRTKGQK 512
            AR A +HFG APG P SHT+PYVR+KG+K
Sbjct: 144 TARTACKHFGKAPGVPHSHTRPYVRSKGRK 173



 Score = 95.9 bits (228), Expect = 3e-20
 Identities = 47/85 (55%), Positives = 57/85 (67%)
 Frame = +1

Query: 1   IDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPIS 180
           IDINHK+DRKVRRTE KSQD+               TN KFN+I+L+RLFMS+INRPP+S
Sbjct: 3   IDINHKYDRKVRRTEPKSQDVYLRLLVKLYRFLQRRTNKKFNRIILKRLFMSKINRPPLS 62

Query: 181 VSRLARHMKKPTREGLIAVVVGTVT 255
           + R+AR  K   +     VVVGTVT
Sbjct: 63  LQRIARFFKAANQPESTIVVVGTVT 87


>AY113554-1|AAM29559.1|  188|Drosophila melanogaster RH01814p
           protein.
          Length = 188

 Score =  133 bits (321), Expect = 2e-31
 Identities = 60/90 (66%), Positives = 73/90 (81%)
 Frame = +3

Query: 243 GDSHNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQR 422
           G   +D RL  +PK+TV ALHVT+ AR RIL AGGE+LTFDQLALR+PTGK T+L+QG+R
Sbjct: 84  GTVTDDARLLVVPKLTVCALHVTQTARERILKAGGEVLTFDQLALRSPTGKNTLLLQGRR 143

Query: 423 NAREAVRHFGPAPGAPRSHTKPYVRTKGQK 512
            AR A +HFG APG P SHT+PYVR+KG+K
Sbjct: 144 TARTACKHFGKAPGVPHSHTRPYVRSKGRK 173



 Score = 95.9 bits (228), Expect = 3e-20
 Identities = 47/85 (55%), Positives = 57/85 (67%)
 Frame = +1

Query: 1   IDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPIS 180
           IDINHK+DRKVRRTE KSQD+               TN KFN+I+L+RLFMS+INRPP+S
Sbjct: 3   IDINHKYDRKVRRTEPKSQDVYLRLLVKLYRFLQRRTNKKFNRIILKRLFMSKINRPPLS 62

Query: 181 VSRLARHMKKPTREGLIAVVVGTVT 255
           + R+AR  K   +     VVVGTVT
Sbjct: 63  LQRIARFFKAANQPESTIVVVGTVT 87


>AE014296-1212|AAF50596.1|  188|Drosophila melanogaster CG8615-PA
           protein.
          Length = 188

 Score =  133 bits (321), Expect = 2e-31
 Identities = 60/90 (66%), Positives = 73/90 (81%)
 Frame = +3

Query: 243 GDSHNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQR 422
           G   +D RL  +PK+TV ALHVT+ AR RIL AGGE+LTFDQLALR+PTGK T+L+QG+R
Sbjct: 84  GTVTDDARLLVVPKLTVCALHVTQTARERILKAGGEVLTFDQLALRSPTGKNTLLLQGRR 143

Query: 423 NAREAVRHFGPAPGAPRSHTKPYVRTKGQK 512
            AR A +HFG APG P SHT+PYVR+KG+K
Sbjct: 144 TARTACKHFGKAPGVPHSHTRPYVRSKGRK 173



 Score = 95.9 bits (228), Expect = 3e-20
 Identities = 47/85 (55%), Positives = 57/85 (67%)
 Frame = +1

Query: 1   IDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPIS 180
           IDINHK+DRKVRRTE KSQD+               TN KFN+I+L+RLFMS+INRPP+S
Sbjct: 3   IDINHKYDRKVRRTEPKSQDVYLRLLVKLYRFLQRRTNKKFNRIILKRLFMSKINRPPLS 62

Query: 181 VSRLARHMKKPTREGLIAVVVGTVT 255
           + R+AR  K   +     VVVGTVT
Sbjct: 63  LQRIARFFKAANQPESTIVVVGTVT 87


>AE014297-754|AAF54238.1|  819|Drosophila melanogaster CG11718-PA
           protein.
          Length = 819

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 24/69 (34%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
 Frame = -1

Query: 420 ADLVPVLSSCQSEHEEPADQK*EFLLQQPKCVHELFR*HEEQPPSSSVSCTVSRHCDCP- 244
           A L+   SS Q+      D+    L QQ  C       HE  P  SS      RHC  P 
Sbjct: 362 ASLIDQKSSSQAR-SSGHDELGNLLWQQDSCEF-----HEHYPSDSSCPVPPLRHCHAPG 415

Query: 243 HYHGNQTLT 217
           H H  +TLT
Sbjct: 416 HGHATKTLT 424


>AE014296-161|AAF47434.1|  841|Drosophila melanogaster CG13908-PA
           protein.
          Length = 841

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
 Frame = -1

Query: 306 HEEQPPSSSVSCTVSRHCDCPHYHGNQTLTSWLLHV-----ARQTRHRDWWPVDTAHKEP 142
           H++QPP     C   +H   PH+  + +  S   H      +R++R +    +  AH+  
Sbjct: 144 HQQQPPPPLHHCQQRKHSHSPHHSRHTSPHSHHHHSHHSRHSRRSRRQGSGSLPGAHQGS 203

Query: 141 A*NDLIEFGICTS 103
           A + ++   ICTS
Sbjct: 204 ANHSVMRPSICTS 216


>U82539-1|AAB71337.1|  214|Drosophila melanogaster arrowhead
           protein.
          Length = 214

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 13/48 (27%), Positives = 19/48 (39%)
 Frame = -2

Query: 467 CSWSRAKVTHCLTSISLTLYQYCLLASRSTKSQLIKSKNFSSSSQNAC 324
           CSW    +  C+    L   Q C +  R    +   SKNF +    +C
Sbjct: 26  CSWHAHCLRCCMCMCPLDRQQSCFIRERQVYCKADYSKNFGAKCSKSC 73


>BT025230-1|ABF17921.1|  275|Drosophila melanogaster FI01007p
           protein.
          Length = 275

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 13/48 (27%), Positives = 18/48 (37%)
 Frame = -2

Query: 467 CSWSRAKVTHCLTSISLTLYQYCLLASRSTKSQLIKSKNFSSSSQNAC 324
           CSW    +  C+    L   Q C +  R    +   SKNF +     C
Sbjct: 26  CSWHAHCLRCCMCMCPLDRQQSCFIRERQVYCKADYSKNFGAKCSKCC 73


>AY071197-1|AAL48819.1|  275|Drosophila melanogaster RE24382p
           protein.
          Length = 275

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 13/48 (27%), Positives = 18/48 (37%)
 Frame = -2

Query: 467 CSWSRAKVTHCLTSISLTLYQYCLLASRSTKSQLIKSKNFSSSSQNAC 324
           CSW    +  C+    L   Q C +  R    +   SKNF +     C
Sbjct: 26  CSWHAHCLRCCMCMCPLDRQQSCFIRERQVYCKADYSKNFGAKCSKCC 73


>AE014296-705|AAF47800.2|  214|Drosophila melanogaster CG1072-PA,
           isoform A protein.
          Length = 214

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 13/48 (27%), Positives = 18/48 (37%)
 Frame = -2

Query: 467 CSWSRAKVTHCLTSISLTLYQYCLLASRSTKSQLIKSKNFSSSSQNAC 324
           CSW    +  C+    L   Q C +  R    +   SKNF +     C
Sbjct: 26  CSWHAHCLRCCMCMCPLDRQQSCFIRERQVYCKADYSKNFGAKCSKCC 73


>AE014296-704|AAN11572.1|  275|Drosophila melanogaster CG1072-PB,
           isoform B protein.
          Length = 275

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 13/48 (27%), Positives = 18/48 (37%)
 Frame = -2

Query: 467 CSWSRAKVTHCLTSISLTLYQYCLLASRSTKSQLIKSKNFSSSSQNAC 324
           CSW    +  C+    L   Q C +  R    +   SKNF +     C
Sbjct: 26  CSWHAHCLRCCMCMCPLDRQQSCFIRERQVYCKADYSKNFGAKCSKCC 73


>AY113578-1|AAM29583.1|  373|Drosophila melanogaster RH30783p
           protein.
          Length = 373

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 17/54 (31%), Positives = 26/54 (48%)
 Frame = -1

Query: 342 QQPKCVHELFR*HEEQPPSSSVSCTVSRHCDCPHYHGNQTLTSWLLHVARQTRH 181
           Q P    ELF    E  P S ++C+        H++GN T TS L +  +Q+ +
Sbjct: 250 QVPDDASELFIEDREMTPMSPINCSTDLQATPYHHNGNAT-TSDLYNQQQQSSY 302


>AE014134-2987|AAF53717.1|  373|Drosophila melanogaster CG17321-PA
           protein.
          Length = 373

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 17/54 (31%), Positives = 26/54 (48%)
 Frame = -1

Query: 342 QQPKCVHELFR*HEEQPPSSSVSCTVSRHCDCPHYHGNQTLTSWLLHVARQTRH 181
           Q P    ELF    E  P S ++C+        H++GN T TS L +  +Q+ +
Sbjct: 250 QVPDDASELFIEDREMTPMSPINCSTDLQATPYHHNGNAT-TSDLYNQQQQSSY 302


>AE014134-887|AAZ66448.1| 9606|Drosophila melanogaster CG33715-PE,
            isoform E protein.
          Length = 9606

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = -1

Query: 465  LLEQGQSDALPHEHFADLVPVLSSCQSEHEEPAD 364
            L+EQ  S+ L HE   ++VPV +  + + E P +
Sbjct: 2622 LIEQSNSEILYHESIVEVVPVSTQEEVQVENPCE 2655


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,318,130
Number of Sequences: 53049
Number of extensions: 611380
Number of successful extensions: 1846
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1779
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1845
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2234671092
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)