Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30629
(728 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q15393 Cluster: Splicing factor 3B subunit 3; n=64; Euk... 151 2e-35
UniRef50_Q54SA7 Cluster: CPSF domain-containing protein; n=1; Di... 117 3e-25
UniRef50_Q2HWB0 Cluster: CPSF A subunit, C-terminal; WD40-like; ... 116 6e-25
UniRef50_A7RHF3 Cluster: Predicted protein; n=1; Nematostella ve... 106 6e-22
UniRef50_A4RYT7 Cluster: Predicted protein; n=3; Viridiplantae|R... 99 1e-19
UniRef50_A0ED07 Cluster: Chromosome undetermined scaffold_9, who... 99 1e-19
UniRef50_Q7RIV2 Cluster: Drosophila melanogaster CG13900 gene pr... 95 1e-18
UniRef50_Q8I574 Cluster: Splicing factor 3b, subunit 3, 130kD, p... 94 3e-18
UniRef50_Q5KP25 Cluster: Pre-mRNA-splicing factor RSE1; n=3; Dik... 93 6e-18
UniRef50_Q2H7K6 Cluster: Putative uncharacterized protein; n=1; ... 85 2e-15
UniRef50_Q0V0M1 Cluster: Putative uncharacterized protein; n=1; ... 83 7e-15
UniRef50_A7ATX1 Cluster: Splicing factor 3b, subunit 3, 130kD, p... 83 9e-15
UniRef50_Q9UTT2 Cluster: Pre-mRNA-splicing factor rse1; n=17; Di... 82 1e-14
UniRef50_Q4N305 Cluster: Putative uncharacterized protein; n=1; ... 82 2e-14
UniRef50_Q5CHP5 Cluster: CG13900 gene product; n=2; Cryptosporid... 81 2e-14
UniRef50_Q4UAB5 Cluster: Splicing factor 3b subunit, putative; n... 81 3e-14
UniRef50_UPI0000499BE9 Cluster: splicing factor 3B subunit 3; n=... 79 1e-13
UniRef50_Q5A7S5 Cluster: Pre-mRNA-splicing factor RSE1; n=1; Can... 69 1e-10
UniRef50_Q6BYK1 Cluster: Pre-mRNA-splicing factor RSE1; n=2; Sac... 54 3e-06
UniRef50_UPI0000498842 Cluster: splicing factor 3b subunit 3; n=... 48 2e-04
UniRef50_A5DFJ2 Cluster: Putative uncharacterized protein; n=1; ... 45 0.002
UniRef50_A2DD61 Cluster: CPSF A subunit region family protein; n... 44 0.004
UniRef50_Q23865 Cluster: RepE; n=2; Dictyostelium discoideum|Rep... 43 0.009
UniRef50_A2EED7 Cluster: Putative uncharacterized protein; n=1; ... 40 0.047
UniRef50_Q4QJB3 Cluster: Putative uncharacterized protein; n=3; ... 38 0.19
UniRef50_A3AIT7 Cluster: Putative uncharacterized protein; n=1; ... 36 1.3
UniRef50_Q84MW5 Cluster: Putative uncharacterized protein; n=1; ... 35 1.8
UniRef50_Q753D4 Cluster: Pre-mRNA-splicing factor RSE1; n=1; Ere... 35 1.8
UniRef50_Q0D7W9 Cluster: Os07g0203700 protein; n=5; Oryza sativa... 35 2.3
UniRef50_Q687X5-2 Cluster: Isoform 2 of Q687X5 ; n=2; Homo/Pan/G... 34 4.1
UniRef50_Q3ACE4 Cluster: Putative oxygen-independent coproporphy... 34 4.1
UniRef50_Q687X5 Cluster: Metalloreductase STEAP4; n=32; Euteleos... 34 4.1
UniRef50_Q5EFC9 Cluster: Sf3b complex subunit 3; n=3; Trypanosom... 33 7.2
UniRef50_Q54HR0 Cluster: Putative uncharacterized protein; n=1; ... 33 7.2
UniRef50_UPI0000DBF905 Cluster: UPI0000DBF905 related cluster; n... 33 9.5
UniRef50_Q7NC21 Cluster: Elongation factor Ts; n=2; Mycoplasma g... 33 9.5
>UniRef50_Q15393 Cluster: Splicing factor 3B subunit 3; n=64;
Eukaryota|Rep: Splicing factor 3B subunit 3 - Homo
sapiens (Human)
Length = 1217
Score = 151 bits (365), Expect = 2e-35
Identities = 63/84 (75%), Positives = 77/84 (91%)
Frame = +2
Query: 2 GASQKGDVVVNFHVGETVTSLQRATLIPGGSEALLYATISGSLGVLLPFTSREDHDFFQH 181
GASQK +V++N+HVGETV SLQ+ TLIPGGSE+L+Y T+SG +G+L+PFTS EDHDFFQH
Sbjct: 1084 GASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDFFQH 1143
Query: 182 LEMHMRSENSPLCGRDHLSFRSYY 253
+EMH+RSE+ PLCGRDHLSFRSYY
Sbjct: 1144 VEMHLRSEHPPLCGRDHLSFRSYY 1167
>UniRef50_Q54SA7 Cluster: CPSF domain-containing protein; n=1;
Dictyostelium discoideum AX4|Rep: CPSF domain-containing
protein - Dictyostelium discoideum AX4
Length = 1256
Score = 117 bits (282), Expect = 3e-25
Identities = 52/84 (61%), Positives = 66/84 (78%)
Frame = +2
Query: 2 GASQKGDVVVNFHVGETVTSLQRATLIPGGSEALLYATISGSLGVLLPFTSREDHDFFQH 181
GA K D + NF VG+TVT+L + +L+ GG E +LY TISG++G L+PFTSRED DFF
Sbjct: 1123 GAPHKLDHIANFFVGDTVTTLNKTSLVVGGPEVILYTTISGAIGALIPFTSREDVDFFST 1182
Query: 182 LEMHMRSENSPLCGRDHLSFRSYY 253
LEM+MRS+ PLCGRDHL++RSYY
Sbjct: 1183 LEMNMRSDCLPLCGRDHLAYRSYY 1206
>UniRef50_Q2HWB0 Cluster: CPSF A subunit, C-terminal; WD40-like;
n=1; Medicago truncatula|Rep: CPSF A subunit,
C-terminal; WD40-like - Medicago truncatula (Barrel
medic)
Length = 632
Score = 116 bits (279), Expect = 6e-25
Identities = 49/84 (58%), Positives = 64/84 (76%)
Frame = +2
Query: 2 GASQKGDVVVNFHVGETVTSLQRATLIPGGSEALLYATISGSLGVLLPFTSREDHDFFQH 181
GA K + +V FHVG+ ++ LQ+A+LIPGG E +L T+ GS+G L FTSR+D DFF H
Sbjct: 502 GAPNKVEEIVQFHVGDVISCLQKASLIPGGGECILNGTVMGSIGALHAFTSRDDVDFFSH 561
Query: 182 LEMHMRSENSPLCGRDHLSFRSYY 253
LEMHMR +N PLCGRDH+++RS Y
Sbjct: 562 LEMHMRQDNPPLCGRDHMAYRSAY 585
>UniRef50_A7RHF3 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella vectensis
Length = 1171
Score = 106 bits (254), Expect = 6e-22
Identities = 48/72 (66%), Positives = 60/72 (83%)
Frame = +2
Query: 2 GASQKGDVVVNFHVGETVTSLQRATLIPGGSEALLYATISGSLGVLLPFTSREDHDFFQH 181
GA QK + + N+ VGETV SLQ+ATLIPGGSE+L++ T+SG +G+L+PFTSRED DFFQH
Sbjct: 1054 GAQQKLETMCNYFVGETVLSLQKATLIPGGSESLVFTTLSGGVGMLVPFTSREDIDFFQH 1113
Query: 182 LEMHMRSENSPL 217
LEMH+RSE L
Sbjct: 1114 LEMHLRSEQPSL 1125
>UniRef50_A4RYT7 Cluster: Predicted protein; n=3; Viridiplantae|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 1196
Score = 99.1 bits (236), Expect = 1e-19
Identities = 43/91 (47%), Positives = 60/91 (65%)
Frame = +2
Query: 2 GASQKGDVVVNFHVGETVTSLQRATLIPGGSEALLYATISGSLGVLLPFTSREDHDFFQH 181
GA K + ++GETV +L + L PGG E ++Y T G +G LLPF+SR + +FF H
Sbjct: 1064 GAPNKSETSAQTYIGETVCALTKGALQPGGIEIIMYGTFMGGIGCLLPFSSRSEIEFFTH 1123
Query: 182 LEMHMRSENSPLCGRDHLSFRSYYSQ*RYVL 274
LEMHMR E + GRDH++FRSYY+ + V+
Sbjct: 1124 LEMHMRQEAPSIVGRDHMAFRSYYAPVKNVI 1154
>UniRef50_A0ED07 Cluster: Chromosome undetermined scaffold_9, whole
genome shotgun sequence; n=3; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_9, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 1178
Score = 98.7 bits (235), Expect = 1e-19
Identities = 44/84 (52%), Positives = 58/84 (69%)
Frame = +2
Query: 2 GASQKGDVVVNFHVGETVTSLQRATLIPGGSEALLYATISGSLGVLLPFTSREDHDFFQH 181
GA K D + NF+VGE +TSLQ+ L+ SE ++Y T GS+ L PF ++ED DFF H
Sbjct: 1046 GAPFKMDQICNFYVGEVITSLQKIALVSTSSEVVVYGTSMGSIAALYPFDNKEDIDFFLH 1105
Query: 182 LEMHMRSENSPLCGRDHLSFRSYY 253
LEM++R E+ PL GRDH+ FRS Y
Sbjct: 1106 LEMYLRVEHQPLSGRDHMQFRSAY 1129
>UniRef50_Q7RIV2 Cluster: Drosophila melanogaster CG13900 gene
product; n=10; Plasmodium|Rep: Drosophila melanogaster
CG13900 gene product - Plasmodium yoelii yoelii
Length = 1235
Score = 95.5 bits (227), Expect = 1e-18
Identities = 39/89 (43%), Positives = 65/89 (73%)
Frame = +2
Query: 8 SQKGDVVVNFHVGETVTSLQRATLIPGGSEALLYATISGSLGVLLPFTSREDHDFFQHLE 187
++K + +++FH+GE VTSLQ+ L P SE ++Y+TI G++G +P+ S+E+ + QHLE
Sbjct: 1105 NRKMEHIMSFHIGEIVTSLQKVKLSPTSSECIIYSTIMGTIGAFIPYDSKEELELTQHLE 1164
Query: 188 MHMRSENSPLCGRDHLSFRSYYSQ*RYVL 274
+ +R+E LCGR+H+ FRSYY ++V+
Sbjct: 1165 IILRTEKHSLCGREHIFFRSYYHPVQHVI 1193
>UniRef50_Q8I574 Cluster: Splicing factor 3b, subunit 3, 130kD,
putative; n=1; Plasmodium falciparum 3D7|Rep: Splicing
factor 3b, subunit 3, 130kD, putative - Plasmodium
falciparum (isolate 3D7)
Length = 1329
Score = 94.3 bits (224), Expect = 3e-18
Identities = 37/82 (45%), Positives = 62/82 (75%)
Frame = +2
Query: 8 SQKGDVVVNFHVGETVTSLQRATLIPGGSEALLYATISGSLGVLLPFTSREDHDFFQHLE 187
++K + +++FH+GE VTS+Q+ L P SE ++Y+TI G++G +P+ ++E+ + QHLE
Sbjct: 1199 NRKLEHMMSFHIGEIVTSMQKVRLSPTSSECIIYSTIMGTIGAFIPYDNKEELELTQHLE 1258
Query: 188 MHMRSENSPLCGRDHLSFRSYY 253
+ +R+E PLCGR+H+ FRSYY
Sbjct: 1259 IILRTEKPPLCGREHIFFRSYY 1280
>UniRef50_Q5KP25 Cluster: Pre-mRNA-splicing factor RSE1; n=3;
Dikarya|Rep: Pre-mRNA-splicing factor RSE1 - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 1217
Score = 93.1 bits (221), Expect = 6e-18
Identities = 37/84 (44%), Positives = 61/84 (72%)
Frame = +2
Query: 2 GASQKGDVVVNFHVGETVTSLQRATLIPGGSEALLYATISGSLGVLLPFTSREDHDFFQH 181
GA+ K +++ ++++G VTS+ + L+ GG + L+Y TISG++G L+PF S +D +F
Sbjct: 1084 GAAHKTEMIGHYNIGSVVTSITKIPLVAGGRDVLVYTTISGAVGALVPFVSSDDIEFMST 1143
Query: 182 LEMHMRSENSPLCGRDHLSFRSYY 253
LEMHMR+++ L GRDH+++R YY
Sbjct: 1144 LEMHMRTQDISLVGRDHIAYRGYY 1167
>UniRef50_Q2H7K6 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized protein
- Chaetomium globosum (Soil fungus)
Length = 979
Score = 84.6 bits (200), Expect = 2e-15
Identities = 36/84 (42%), Positives = 52/84 (61%)
Frame = +2
Query: 2 GASQKGDVVVNFHVGETVTSLQRATLIPGGSEALLYATISGSLGVLLPFTSREDHDFFQH 181
GA + + +FH + T + + L+ GG E L+++ G++GV +PF +RED DFF
Sbjct: 763 GAPHRLQLTAHFHTQDIPTGITKTHLVVGGQEVLVWSGFQGTVGVFVPFVTREDADFFLA 822
Query: 182 LEMHMRSENSPLCGRDHLSFRSYY 253
LE HMR E L GRDHL++R YY
Sbjct: 823 LEQHMRGEEPSLIGRDHLAYRGYY 846
>UniRef50_Q0V0M1 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 1273
Score = 83.0 bits (196), Expect = 7e-15
Identities = 34/91 (37%), Positives = 57/91 (62%)
Frame = +2
Query: 2 GASQKGDVVVNFHVGETVTSLQRATLIPGGSEALLYATISGSLGVLLPFTSREDHDFFQH 181
G + + D V ++ + S+Q+ L+ G + +A + G+LG L+PF SR H FQ
Sbjct: 1110 GTANRLDSVAHYFANDIPISIQKTHLLSGAERIIFWAGLQGTLGALIPFNSRRQHKMFQQ 1169
Query: 182 LEMHMRSENSPLCGRDHLSFRSYYSQ*RYVL 274
LE+ +RS++ P+ GRDHL+FRSY++ + V+
Sbjct: 1170 LELQLRSDDKPMSGRDHLAFRSYFNPVKSVI 1200
>UniRef50_A7ATX1 Cluster: Splicing factor 3b, subunit 3, 130kD,
putative; n=1; Babesia bovis|Rep: Splicing factor 3b,
subunit 3, 130kD, putative - Babesia bovis
Length = 1169
Score = 82.6 bits (195), Expect = 9e-15
Identities = 36/76 (47%), Positives = 52/76 (68%)
Frame = +2
Query: 26 VVNFHVGETVTSLQRATLIPGGSEALLYATISGSLGVLLPFTSREDHDFFQHLEMHMRSE 205
V FH+G+ T++ +A L + +LY T+ GS+G L+PF S+++ DF QHLEM M +E
Sbjct: 1046 VCQFHLGDLPTAMDKAALSQS-THVVLYGTVMGSIGALVPFQSKDELDFLQHLEMLMATE 1104
Query: 206 NSPLCGRDHLSFRSYY 253
PLCGR+H +RSYY
Sbjct: 1105 APPLCGREHSFYRSYY 1120
>UniRef50_Q9UTT2 Cluster: Pre-mRNA-splicing factor rse1; n=17;
Dikarya|Rep: Pre-mRNA-splicing factor rse1 -
Schizosaccharomyces pombe (Fission yeast)
Length = 1206
Score = 82.2 bits (194), Expect = 1e-14
Identities = 38/87 (43%), Positives = 56/87 (64%)
Frame = +2
Query: 14 KGDVVVNFHVGETVTSLQRATLIPGGSEALLYATISGSLGVLLPFTSREDHDFFQHLEMH 193
K D++ +F + TSLQ+ L+ G E LL+ + G++GV PF ++ED FFQ LE
Sbjct: 1078 KLDLMAHFFTNDIPTSLQKVQLVEGAREVLLWTGLLGTVGVFTPFINQEDVRFFQQLEFL 1137
Query: 194 MRSENSPLCGRDHLSFRSYYSQ*RYVL 274
+R E PL GRDHL++RSYY+ + V+
Sbjct: 1138 LRKECPPLAGRDHLAYRSYYAPVKCVI 1164
>UniRef50_Q4N305 Cluster: Putative uncharacterized protein; n=1;
Theileria parva|Rep: Putative uncharacterized protein -
Theileria parva
Length = 1231
Score = 81.8 bits (193), Expect = 2e-14
Identities = 37/73 (50%), Positives = 52/73 (71%)
Frame = +2
Query: 35 FHVGETVTSLQRATLIPGGSEALLYATISGSLGVLLPFTSREDHDFFQHLEMHMRSENSP 214
FH+G+ VTSLQR + P SE +LY T+ GS+GVL+PF S+++ DF QHLEM + ++
Sbjct: 1111 FHLGDIVTSLQRVRINPIHSEVVLYTTLMGSIGVLIPFVSKDELDFLQHLEMLLCNQIDT 1170
Query: 215 LCGRDHLSFRSYY 253
+ GR+ FRSYY
Sbjct: 1171 VTGREVQMFRSYY 1183
>UniRef50_Q5CHP5 Cluster: CG13900 gene product; n=2;
Cryptosporidium|Rep: CG13900 gene product -
Cryptosporidium hominis
Length = 1318
Score = 81.4 bits (192), Expect = 2e-14
Identities = 36/79 (45%), Positives = 51/79 (64%)
Frame = +2
Query: 20 DVVVNFHVGETVTSLQRATLIPGGSEALLYATISGSLGVLLPFTSREDHDFFQHLEMHMR 199
+ V FH+G+ VT LQ++ L P +EA++Y T+ GS+G L P + ED + LE+ +R
Sbjct: 1192 NTVAQFHLGDIVTCLQKSQLTPTSAEAIIYGTVLGSIGSLSPILNNEDIELLSKLEILLR 1251
Query: 200 SENSPLCGRDHLSFRSYYS 256
+ S L RDHL FRSYYS
Sbjct: 1252 KQKSTLLSRDHLMFRSYYS 1270
>UniRef50_Q4UAB5 Cluster: Splicing factor 3b subunit, putative; n=1;
Theileria annulata|Rep: Splicing factor 3b subunit,
putative - Theileria annulata
Length = 1340
Score = 81.0 bits (191), Expect = 3e-14
Identities = 37/73 (50%), Positives = 51/73 (69%)
Frame = +2
Query: 35 FHVGETVTSLQRATLIPGGSEALLYATISGSLGVLLPFTSREDHDFFQHLEMHMRSENSP 214
FH+G+ VTS QR + P SE +LY T+ GS+GVL+PF S+++ DF QHLEM M ++
Sbjct: 1221 FHLGDIVTSFQRVRINPIHSEVVLYTTLMGSIGVLVPFVSKDELDFLQHLEMLMCNQIDT 1280
Query: 215 LCGRDHLSFRSYY 253
+ GR+ FRSYY
Sbjct: 1281 VTGREVQMFRSYY 1293
>UniRef50_UPI0000499BE9 Cluster: splicing factor 3B subunit 3; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: splicing factor 3B
subunit 3 - Entamoeba histolytica HM-1:IMSS
Length = 1145
Score = 78.6 bits (185), Expect = 1e-13
Identities = 37/82 (45%), Positives = 48/82 (58%)
Frame = +2
Query: 2 GASQKGDVVVNFHVGETVTSLQRATLIPGGSEALLYATISGSLGVLLPFTSREDHDFFQH 181
G+S K F VG+ TS + +LIPG LY+ G L L+P S+ D DF+QH
Sbjct: 1012 GSSYKMVTATQFFVGDIATSFAQCSLIPGAPSIFLYSNFMGGLSALIPLQSQNDIDFYQH 1071
Query: 182 LEMHMRSENSPLCGRDHLSFRS 247
LEMHMR + L R+H+SFRS
Sbjct: 1072 LEMHMRVHWTNLTDRNHISFRS 1093
>UniRef50_Q5A7S5 Cluster: Pre-mRNA-splicing factor RSE1; n=1; Candida
albicans|Rep: Pre-mRNA-splicing factor RSE1 - Candida
albicans (Yeast)
Length = 1219
Score = 68.9 bits (161), Expect = 1e-10
Identities = 26/83 (31%), Positives = 53/83 (63%)
Frame = +2
Query: 26 VVNFHVGETVTSLQRATLIPGGSEALLYATISGSLGVLLPFTSREDHDFFQHLEMHMRSE 205
++ FH+G+ +TS L G+E+++Y + G++G+L+P S+ + + +L+++M+
Sbjct: 1094 LIEFHIGDIITSFNLGCLNLAGTESVIYTGLQGTIGLLIPLVSKSEVELLFNLQLYMQQS 1153
Query: 206 NSPLCGRDHLSFRSYYSQ*RYVL 274
+ L G+DHL RSYY+ + V+
Sbjct: 1154 QNNLVGKDHLKLRSYYNPIKNVI 1176
>UniRef50_Q6BYK1 Cluster: Pre-mRNA-splicing factor RSE1; n=2;
Saccharomycetaceae|Rep: Pre-mRNA-splicing factor RSE1 -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 1256
Score = 54.4 bits (125), Expect = 3e-06
Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 13/104 (12%)
Frame = +2
Query: 2 GASQKGDVVVNFHVGETVTSLQRATLIPGGSEALLYATISGSLGVLLPFTSREDHDFFQH 181
G+ + + F++ + TS + +L+ GG E+++Y I G+LG+LLP ++ + F
Sbjct: 1110 GSGSRLKNICEFYLQDIPTSFTKGSLVMGGKESIIYTGIQGTLGLLLPLSTENEVKFLGD 1169
Query: 182 LEMHMR-------------SENSPLCGRDHLSFRSYYSQ*RYVL 274
L++ +R L G+DHL FRSYY+ + V+
Sbjct: 1170 LQLLLRKYFDYNFDDFDKDKNGYNLLGKDHLKFRSYYNPVKNVM 1213
>UniRef50_UPI0000498842 Cluster: splicing factor 3b subunit 3; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: splicing factor 3b
subunit 3 - Entamoeba histolytica HM-1:IMSS
Length = 1108
Score = 48.4 bits (110), Expect = 2e-04
Identities = 21/55 (38%), Positives = 32/55 (58%)
Frame = +2
Query: 80 IPGGSEALLYATISGSLGVLLPFTSREDHDFFQHLEMHMRSENSPLCGRDHLSFR 244
I ++Y+ + G +GVL+PF RED +FF LEM +++ SPL S+R
Sbjct: 1001 IKENKNVIIYSCLMGRIGVLIPFNFREDVEFFSKLEMEIKNNYSPLLSNSFDSYR 1055
>UniRef50_A5DFJ2 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 1206
Score = 45.2 bits (102), Expect = 0.002
Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 13/93 (13%)
Frame = +2
Query: 35 FHVGETVTSLQRATLIPGGSEALLYATISGSLGVLLPFTSREDHDFFQHLEMHMRSENSP 214
F + + T + TL+ GG E++ Y + GSLG P S+ + FF LE +R P
Sbjct: 1071 FFLQDIPTLFFKGTLVTGGKESIFYTGLCGSLGFFEPLISKLEVSFFTALENSIRKVLDP 1130
Query: 215 -------------LCGRDHLSFRSYYSQ*RYVL 274
L G+D L FR YY+ + V+
Sbjct: 1131 NLEEHDKKRLYCQLLGKDQLKFRGYYNPVKNVI 1163
>UniRef50_A2DD61 Cluster: CPSF A subunit region family protein; n=1;
Trichomonas vaginalis G3|Rep: CPSF A subunit region
family protein - Trichomonas vaginalis G3
Length = 1142
Score = 44.0 bits (99), Expect = 0.004
Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Frame = +2
Query: 2 GASQKGDVVVNFHVGETVTSLQRATLIPGGSE--ALLYATISGSLGVLLPFTSREDHDFF 175
GA K ++ +H+G +T L L G E +++Y T+ G +G+ +P + D F
Sbjct: 1012 GAKNKVELSNMYHIGSPITGL---CLSQGDFENTSIVYGTVDGEIGLFIPLKTDTDARLF 1068
Query: 176 QHLEMHMRSENSPLCGRDHLSFRSYYS 256
+ LE M+ GR FRSYY+
Sbjct: 1069 RLLEDEMKKLIKSPVGRFIEQFRSYYT 1095
>UniRef50_Q23865 Cluster: RepE; n=2; Dictyostelium discoideum|Rep:
RepE - Dictyostelium discoideum (Slime mold)
Length = 1139
Score = 42.7 bits (96), Expect = 0.009
Identities = 24/83 (28%), Positives = 47/83 (56%), Gaps = 6/83 (7%)
Frame = +2
Query: 20 DVVVNFHVGETVTSLQRATLI--PGGSE----ALLYATISGSLGVLLPFTSREDHDFFQH 181
D V ++H+GE++ S++ +L+ P + +LYA+++GS+GV+ S ED FF
Sbjct: 1003 DSVGHYHIGESINSMRHGSLVRLPDSDQPIIPTILYASVNGSIGVVASI-SEEDFIFFSK 1061
Query: 182 LEMHMRSENSPLCGRDHLSFRSY 250
L+ + + G H ++R++
Sbjct: 1062 LQKGLNQVVRGVGGFSHETWRAF 1084
>UniRef50_A2EED7 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 1036
Score = 40.3 bits (90), Expect = 0.047
Identities = 21/56 (37%), Positives = 33/56 (58%)
Frame = +2
Query: 20 DVVVNFHVGETVTSLQRATLIPGGSEALLYATISGSLGVLLPFTSREDHDFFQHLE 187
D V +F VGE VTSL ++ S+ L Y T+ G +GVL+P ++ E+ + +E
Sbjct: 915 DRVASFMVGEMVTSL----MVSPASKTLYYTTLLGQIGVLIPISNEEEFNSLASVE 966
>UniRef50_Q4QJB3 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 1980
Score = 38.3 bits (85), Expect = 0.19
Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
Frame = +2
Query: 26 VVNFHVGETVTSLQRATLIPG-GSEALL------YATISGSLGVLLPFTSREDHDFFQHL 184
V HVGE VT+L P G++A L Y+T GS+G +P S ED +L
Sbjct: 1825 VARHHVGELVTALHVQPYDPSQGTDAALATKIVYYSTALGSIGAYVPLLSEEDGALAAYL 1884
Query: 185 EMHMRSENSPLCG 223
+ + S PL G
Sbjct: 1885 QPLLHSHMRPLLG 1897
>UniRef50_A3AIT7 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 120
Score = 35.5 bits (78), Expect = 1.3
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2
Query: 557 KQTHA*DISHYWWVGPLVSPHGVGT-HHPLALIPAVGAVMRFRFERWGQPL 706
++TH + H GP V T HH A +P AV+R+ + RWG+P+
Sbjct: 42 RRTH---LRHCLGFGPCVGATDEATVHHGQATLPLPRAVLRYEYMRWGEPM 89
>UniRef50_Q84MW5 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 151
Score = 35.1 bits (77), Expect = 1.8
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +2
Query: 578 ISHYWWVGPLVSPHGVGT-HHPLALIPAVGAVMRFRFERWGQPL 706
+ H GP V T HH A +P AV+R+ + RWG+P+
Sbjct: 14 LRHCLGFGPCVGATDEATVHHGQATLPLPRAVLRYEYMRWGEPM 57
>UniRef50_Q753D4 Cluster: Pre-mRNA-splicing factor RSE1; n=1;
Eremothecium gossypii|Rep: Pre-mRNA-splicing factor RSE1
- Ashbya gossypii (Yeast) (Eremothecium gossypii)
Length = 1288
Score = 35.1 bits (77), Expect = 1.8
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +2
Query: 98 ALLYATISGSLGVLLPFTSREDHDFFQHLEMHMR 199
++LYA + G++G L+P +R + +FF LE MR
Sbjct: 1142 SILYAGLQGTIGYLIPLITRREIEFFDLLEQAMR 1175
>UniRef50_Q0D7W9 Cluster: Os07g0203700 protein; n=5; Oryza
sativa|Rep: Os07g0203700 protein - Oryza sativa subsp.
japonica (Rice)
Length = 666
Score = 34.7 bits (76), Expect = 2.3
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +2
Query: 110 ATISGSLGVLLPFTSREDHDFFQHLE--MHMRSENSPLCGRDHLSFR 244
+T+ GS+ V++P TS E+H Q ++ + + +PL G DH FR
Sbjct: 559 STLLGSIFVMIPLTS-EEHQMLQDVQERLSVHPLTAPLLGNDHAEFR 604
>UniRef50_Q687X5-2 Cluster: Isoform 2 of Q687X5 ; n=2;
Homo/Pan/Gorilla group|Rep: Isoform 2 of Q687X5 - Homo
sapiens (Human)
Length = 283
Score = 33.9 bits (74), Expect = 4.1
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 65 QRATLIPGGSEALLYATISGSLGVLLPFTSREDHDFFQHL 184
Q+ TL+P G+E L Y+ + G+++ RE +DF L
Sbjct: 53 QKTTLLPSGAEVLSYSEAAKKSGIIIIAIHREHYDFLTEL 92
>UniRef50_Q3ACE4 Cluster: Putative oxygen-independent
coproporphyrinogen III oxidase, Fe-S oxidoreductase;
n=1; Carboxydothermus hydrogenoformans Z-2901|Rep:
Putative oxygen-independent coproporphyrinogen III
oxidase, Fe-S oxidoreductase - Carboxydothermus
hydrogenoformans (strain Z-2901 / DSM 6008)
Length = 292
Score = 33.9 bits (74), Expect = 4.1
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = -2
Query: 397 LYQQCNTNVFRMKTSAD*LSECNLKFTKF-IKTSIFSNNATSEYIPLLGVITSKR 236
LY+ N F++ +S + L E L + ++F +N S Y+PL GV+ R
Sbjct: 211 LYKDAEENRFQLLSSKEILQELKLFLQNLNLSNTVFRSNHASNYLPLRGVLNQDR 265
>UniRef50_Q687X5 Cluster: Metalloreductase STEAP4; n=32;
Euteleostomi|Rep: Metalloreductase STEAP4 - Homo sapiens
(Human)
Length = 459
Score = 33.9 bits (74), Expect = 4.1
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 65 QRATLIPGGSEALLYATISGSLGVLLPFTSREDHDFFQHL 184
Q+ TL+P G+E L Y+ + G+++ RE +DF L
Sbjct: 53 QKTTLLPSGAEVLSYSEAAKKSGIIIIAIHREHYDFLTEL 92
>UniRef50_Q5EFC9 Cluster: Sf3b complex subunit 3; n=3; Trypanosoma
cruzi|Rep: Sf3b complex subunit 3 - Trypanosoma cruzi
Length = 1800
Score = 33.1 bits (72), Expect = 7.2
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 7/57 (12%)
Frame = +2
Query: 38 HVGETVTSLQRATLIPGGS-------EALLYATISGSLGVLLPFTSREDHDFFQHLE 187
H G+ VT+L+ P G L YAT G++G PF ED F HL+
Sbjct: 1634 HTGQLVTALRVHDYDPSGGADPSLALRILFYATSLGTVGAYTPFVREEDAVFAAHLQ 1690
>UniRef50_Q54HR0 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 1275
Score = 33.1 bits (72), Expect = 7.2
Identities = 19/50 (38%), Positives = 28/50 (56%)
Frame = -2
Query: 406 SALLYQQCNTNVFRMKTSAD*LSECNLKFTKFIKTSIFSNNATSEYIPLL 257
S + Q N N+F+ + D S+ N+KF KFIK + + EYIPL+
Sbjct: 780 SNFILNQLNINLFKEEGREDGDSDGNIKF-KFIKDEENQKDNSPEYIPLI 828
>UniRef50_UPI0000DBF905 Cluster: UPI0000DBF905 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBF905 UniRef100 entry -
Rattus norvegicus
Length = 1513
Score = 32.7 bits (71), Expect = 9.5
Identities = 29/72 (40%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +3
Query: 291 ENIDVFINLVNFKLHSDSQSADVFILKTFVLHCWYSKADELCTACDLPLW*RRL--AIGC 464
ENID+ V K DS D F L+ V++C S+ EL T CD+PL RL AI
Sbjct: 113 ENIDIQGKTVIGKRLYDSVPID-FDLQRIVIYC-DSRHAELETCCDIPLGPPRLGDAIRT 170
Query: 465 CILESRVRCYQL 500
IL S + Y +
Sbjct: 171 SILCSSLHSYSM 182
>UniRef50_Q7NC21 Cluster: Elongation factor Ts; n=2; Mycoplasma
gallisepticum|Rep: Elongation factor Ts - Mycoplasma
gallisepticum
Length = 292
Score = 32.7 bits (71), Expect = 9.5
Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +2
Query: 41 VGETVTSLQRATLIP--GGSEALLYATISGSLGVLLPFTSREDHDFFQHLEMHMRSENSP 214
+GE + SL+R + S Y + +GV++ + +D +F +HL MH+ + N
Sbjct: 132 IGEKI-SLRRVAFVKEEANSSLATYLHSNSRIGVIVKTSKTDDKEFLKHLAMHIAASNPK 190
Query: 215 LCGRDHLS 238
+ +S
Sbjct: 191 FVSQKDVS 198
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 768,727,614
Number of Sequences: 1657284
Number of extensions: 15973871
Number of successful extensions: 38432
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 37073
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38418
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 58853922985
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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