Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30629
         (728 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           25   2.4  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         24   4.2  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    23   9.7  
AJ276486-1|CAB90818.1|  364|Anopheles gambiae serine protease pr...    23   9.7  

>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 7/13 (53%), Positives = 12/13 (92%)
 Frame = -2

Query: 466 QHPIARRRHHNGR 428
           QHP ++++HHNG+
Sbjct: 298 QHPSSQQQHHNGK 310


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = +2

Query: 170  FFQHLEMHMRSENSPLCGRDHLSFRSYYSQ*RYV 271
            + +  ++H++++  PL   DH S R  +   RYV
Sbjct: 1068 YHRKYKIHIQNQRQPLLDVDHTSARLNFLTPRYV 1101


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -2

Query: 490 QRTRLSRMQHPIARRRHHNGRSHAVHNS 407
           Q +   + QHP   + HH+   H  H+S
Sbjct: 168 QPSSYHQQQHPGHSQHHHHHHHHHPHHS 195


>AJ276486-1|CAB90818.1|  364|Anopheles gambiae serine protease
           protein.
          Length = 364

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 206 NSPLCGRDHLSFRSYYSQ 259
           NSP CG   L+ R Y+ +
Sbjct: 94  NSPTCGAQQLADRIYFGE 111


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 828,573
Number of Sequences: 2352
Number of extensions: 17957
Number of successful extensions: 65
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 65
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74428737
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)