Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30629
(728 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D87686-1|BAA32662.2| 1253|Homo sapiens KIAA0017 protein protein. 151 3e-36
D13642-1|BAA02805.1| 399|Homo sapiens KIAA0017 protein. 151 3e-36
BC068974-1|AAH68974.1| 1217|Homo sapiens splicing factor 3b, sub... 151 3e-36
BC003146-1|AAH03146.1| 399|Homo sapiens SF3B3 protein protein. 151 3e-36
BC000463-1|AAH00463.1| 399|Homo sapiens SF3B3 protein protein. 151 3e-36
AJ001443-1|CAB56791.1| 1217|Homo sapiens spliceosomal protein SA... 151 3e-36
BC020600-1|AAH20600.1| 283|Homo sapiens STEAP4 protein protein. 34 0.60
AF423423-1|AAQ04064.1| 494|Homo sapiens six transmembrane prost... 34 0.60
AF423422-1|AAQ04063.1| 459|Homo sapiens six transmembrane prost... 34 0.60
AK026806-1|BAB15559.1| 283|Homo sapiens protein ( Homo sapiens ... 31 4.2
BC027936-1|AAH27936.1| 754|Homo sapiens CXorf22 protein protein. 31 5.6
AL590065-1|CAI40038.2| 976|Homo sapiens chromosome X open readi... 31 5.6
AK126295-1|BAC86517.1| 976|Homo sapiens protein ( Homo sapiens ... 31 5.6
>D87686-1|BAA32662.2| 1253|Homo sapiens KIAA0017 protein protein.
Length = 1253
Score = 151 bits (365), Expect = 3e-36
Identities = 63/84 (75%), Positives = 77/84 (91%)
Frame = +2
Query: 2 GASQKGDVVVNFHVGETVTSLQRATLIPGGSEALLYATISGSLGVLLPFTSREDHDFFQH 181
GASQK +V++N+HVGETV SLQ+ TLIPGGSE+L+Y T+SG +G+L+PFTS EDHDFFQH
Sbjct: 1120 GASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDFFQH 1179
Query: 182 LEMHMRSENSPLCGRDHLSFRSYY 253
+EMH+RSE+ PLCGRDHLSFRSYY
Sbjct: 1180 VEMHLRSEHPPLCGRDHLSFRSYY 1203
>D13642-1|BAA02805.1| 399|Homo sapiens KIAA0017 protein.
Length = 399
Score = 151 bits (365), Expect = 3e-36
Identities = 63/84 (75%), Positives = 77/84 (91%)
Frame = +2
Query: 2 GASQKGDVVVNFHVGETVTSLQRATLIPGGSEALLYATISGSLGVLLPFTSREDHDFFQH 181
GASQK +V++N+HVGETV SLQ+ TLIPGGSE+L+Y T+SG +G+L+PFTS EDHDFFQH
Sbjct: 266 GASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDFFQH 325
Query: 182 LEMHMRSENSPLCGRDHLSFRSYY 253
+EMH+RSE+ PLCGRDHLSFRSYY
Sbjct: 326 VEMHLRSEHPPLCGRDHLSFRSYY 349
>BC068974-1|AAH68974.1| 1217|Homo sapiens splicing factor 3b, subunit
3, 130kDa protein.
Length = 1217
Score = 151 bits (365), Expect = 3e-36
Identities = 63/84 (75%), Positives = 77/84 (91%)
Frame = +2
Query: 2 GASQKGDVVVNFHVGETVTSLQRATLIPGGSEALLYATISGSLGVLLPFTSREDHDFFQH 181
GASQK +V++N+HVGETV SLQ+ TLIPGGSE+L+Y T+SG +G+L+PFTS EDHDFFQH
Sbjct: 1084 GASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDFFQH 1143
Query: 182 LEMHMRSENSPLCGRDHLSFRSYY 253
+EMH+RSE+ PLCGRDHLSFRSYY
Sbjct: 1144 VEMHLRSEHPPLCGRDHLSFRSYY 1167
>BC003146-1|AAH03146.1| 399|Homo sapiens SF3B3 protein protein.
Length = 399
Score = 151 bits (365), Expect = 3e-36
Identities = 63/84 (75%), Positives = 77/84 (91%)
Frame = +2
Query: 2 GASQKGDVVVNFHVGETVTSLQRATLIPGGSEALLYATISGSLGVLLPFTSREDHDFFQH 181
GASQK +V++N+HVGETV SLQ+ TLIPGGSE+L+Y T+SG +G+L+PFTS EDHDFFQH
Sbjct: 266 GASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDFFQH 325
Query: 182 LEMHMRSENSPLCGRDHLSFRSYY 253
+EMH+RSE+ PLCGRDHLSFRSYY
Sbjct: 326 VEMHLRSEHPPLCGRDHLSFRSYY 349
>BC000463-1|AAH00463.1| 399|Homo sapiens SF3B3 protein protein.
Length = 399
Score = 151 bits (365), Expect = 3e-36
Identities = 63/84 (75%), Positives = 77/84 (91%)
Frame = +2
Query: 2 GASQKGDVVVNFHVGETVTSLQRATLIPGGSEALLYATISGSLGVLLPFTSREDHDFFQH 181
GASQK +V++N+HVGETV SLQ+ TLIPGGSE+L+Y T+SG +G+L+PFTS EDHDFFQH
Sbjct: 266 GASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDFFQH 325
Query: 182 LEMHMRSENSPLCGRDHLSFRSYY 253
+EMH+RSE+ PLCGRDHLSFRSYY
Sbjct: 326 VEMHLRSEHPPLCGRDHLSFRSYY 349
>AJ001443-1|CAB56791.1| 1217|Homo sapiens spliceosomal protein SAP 130
protein.
Length = 1217
Score = 151 bits (365), Expect = 3e-36
Identities = 63/84 (75%), Positives = 77/84 (91%)
Frame = +2
Query: 2 GASQKGDVVVNFHVGETVTSLQRATLIPGGSEALLYATISGSLGVLLPFTSREDHDFFQH 181
GASQK +V++N+HVGETV SLQ+ TLIPGGSE+L+Y T+SG +G+L+PFTS EDHDFFQH
Sbjct: 1084 GASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDFFQH 1143
Query: 182 LEMHMRSENSPLCGRDHLSFRSYY 253
+EMH+RSE+ PLCGRDHLSFRSYY
Sbjct: 1144 VEMHLRSEHPPLCGRDHLSFRSYY 1167
>BC020600-1|AAH20600.1| 283|Homo sapiens STEAP4 protein protein.
Length = 283
Score = 33.9 bits (74), Expect = 0.60
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 65 QRATLIPGGSEALLYATISGSLGVLLPFTSREDHDFFQHL 184
Q+ TL+P G+E L Y+ + G+++ RE +DF L
Sbjct: 53 QKTTLLPSGAEVLSYSEAAKKSGIIIIAIHREHYDFLTEL 92
>AF423423-1|AAQ04064.1| 494|Homo sapiens six transmembrane prostate
protein 2 variant 2 protein.
Length = 494
Score = 33.9 bits (74), Expect = 0.60
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 65 QRATLIPGGSEALLYATISGSLGVLLPFTSREDHDFFQHL 184
Q+ TL+P G+E L Y+ + G+++ RE +DF L
Sbjct: 53 QKTTLLPSGAEVLSYSEAAKKSGIIIIAIHREHYDFLTEL 92
>AF423422-1|AAQ04063.1| 459|Homo sapiens six transmembrane prostate
protein 2 variant 1 protein.
Length = 459
Score = 33.9 bits (74), Expect = 0.60
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 65 QRATLIPGGSEALLYATISGSLGVLLPFTSREDHDFFQHL 184
Q+ TL+P G+E L Y+ + G+++ RE +DF L
Sbjct: 53 QKTTLLPSGAEVLSYSEAAKKSGIIIIAIHREHYDFLTEL 92
>AK026806-1|BAB15559.1| 283|Homo sapiens protein ( Homo sapiens
cDNA: FLJ23153 fis, clone LNG09441. ).
Length = 283
Score = 31.1 bits (67), Expect = 4.2
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 65 QRATLIPGGSEALLYATISGSLGVLLPFTSREDHDFFQHL 184
Q+ TL+P G+E L Y+ + +++ RE +DF L
Sbjct: 53 QKTTLLPSGAEVLSYSEAAKKSDIIIIAIHREHYDFLTEL 92
>BC027936-1|AAH27936.1| 754|Homo sapiens CXorf22 protein protein.
Length = 754
Score = 30.7 bits (66), Expect = 5.6
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 8 SQKGDVVVNFHVGETVTSLQRATLIP 85
+QKG + +N H G S+QR +L+P
Sbjct: 3 TQKGSLTINVHRGSLAMSIQRGSLVP 28
>AL590065-1|CAI40038.2| 976|Homo sapiens chromosome X open
reading frame 22 protein.
Length = 976
Score = 30.7 bits (66), Expect = 5.6
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 8 SQKGDVVVNFHVGETVTSLQRATLIP 85
+QKG + +N H G S+QR +L+P
Sbjct: 3 TQKGSLTINVHRGSLAMSIQRGSLVP 28
>AK126295-1|BAC86517.1| 976|Homo sapiens protein ( Homo sapiens
cDNA FLJ44315 fis, clone TRACH3000014. ).
Length = 976
Score = 30.7 bits (66), Expect = 5.6
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 8 SQKGDVVVNFHVGETVTSLQRATLIP 85
+QKG + +N H G S+QR +L+P
Sbjct: 3 TQKGSLTINVHRGSLAMSIQRGSLVP 28
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,442,916
Number of Sequences: 237096
Number of extensions: 2569301
Number of successful extensions: 8321
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 8147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8315
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8623170556
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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