Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30628
         (713 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    23   1.9  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    23   2.5  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    23   2.5  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    22   5.7  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    22   5.7  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    22   5.7  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    22   5.7  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       21   9.9  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   9.9  

>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -2

Query: 667 YLPKTLNTQREMLPY 623
           YLP +L+  R MLPY
Sbjct: 24  YLPPSLSDTRPMLPY 38


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -3

Query: 507 TVYSEPYKPKNCKLKTKSVFCST 439
           T+ S+P KP   + K   V+CS+
Sbjct: 109 TLNSKPLKPVKIRTKVYLVYCSS 131


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -3

Query: 507 TVYSEPYKPKNCKLKTKSVFCST 439
           T+ S+P KP   + K   V+CS+
Sbjct: 105 TLNSKPLKPVKIRTKVYLVYCSS 127


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -1

Query: 461 LNQCSAVLLTCLQKTLNASYVLLRMIQGDGSEVGYG 354
           + Q + + LT     +NAS+ ++  I G     GYG
Sbjct: 93  IGQENCLYLTIYTTHVNASFDVVVYIHGGAFMTGYG 128


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -1

Query: 461 LNQCSAVLLTCLQKTLNASYVLLRMIQGDGSEVGYG 354
           + Q + + LT     +NAS+ ++  I G     GYG
Sbjct: 93  IGQENCLYLTIYTTHVNASFDVVVYIHGGAFMTGYG 128


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -1

Query: 461 LNQCSAVLLTCLQKTLNASYVLLRMIQGDGSEVGYG 354
           + Q + + LT     +NAS+ ++  I G     GYG
Sbjct: 93  IGQENCLYLTIYTTHVNASFDVVVYIHGGAFMTGYG 128


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -1

Query: 461 LNQCSAVLLTCLQKTLNASYVLLRMIQGDGSEVGYG 354
           + Q + + LT     +NAS+ ++  I G     GYG
Sbjct: 93  IGQENCLYLTIYTTHVNASFDVVVYIHGGAFMTGYG 128


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = -3

Query: 477 NCKLKTKSVFCSTLDLPSENSQCQLCSSTYDTG 379
           NCK   K   CS  D   +++ C+   +  D G
Sbjct: 131 NCKNGWKGKTCSLKDSHCDHTTCKNGGTCQDLG 163


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -1

Query: 185  SVVHGSVIYRFLDGV 141
            S++H   I +FLDG+
Sbjct: 1176 SLIHRKKIVKFLDGI 1190


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,489
Number of Sequences: 336
Number of extensions: 2888
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)