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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30626
         (734 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)                       139   2e-33
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)                      138   4e-33
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)             132   2e-31
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)                      117   9e-27
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)              70   2e-12
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)                 69   4e-12
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)              55   5e-08
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)                 42   7e-04
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)              38   0.008
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)                 31   0.97 
SB_52667| Best HMM Match : MRP-L47 (HMM E-Value=0.0013)                31   1.3  
SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3)            29   3.0  
SB_47707| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.9  
SB_9053| Best HMM Match : TIG (HMM E-Value=0)                          29   5.2  
SB_55989| Best HMM Match : zf-C2H2 (HMM E-Value=8e-08)                 28   6.8  
SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.8  
SB_45916| Best HMM Match : Cadherin (HMM E-Value=0)                    28   9.0  

>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
          Length = 640

 Score =  139 bits (336), Expect = 2e-33
 Identities = 64/88 (72%), Positives = 75/88 (85%)
 Frame = +1

Query: 244 PQQQIFDAKRLIGRKFEDATVQADMKHWPFDVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 423
           P+  IFDAKRLIGR+++DATVQ+DMK WPF ++SD  KPKI+V YKGE KTF  EE+SSM
Sbjct: 63  PENTIFDAKRLIGRRYDDATVQSDMKLWPFKIISDNNKPKIQVEYKGERKTFAAEEISSM 122

Query: 424 VLTKMKETAEAYLGKTVQNAVITVPAYF 507
           VL KMKETAEAYLG+ V +AVITVPAYF
Sbjct: 123 VLGKMKETAEAYLGQKVTSAVITVPAYF 150



 Score =  129 bits (312), Expect = 2e-30
 Identities = 58/65 (89%), Positives = 62/65 (95%)
 Frame = +2

Query: 59  MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 238
           M KAPA+GIDLGTTYSCVGVFQ+GKVEIIANDQGNRTTPSYV FTDTERL+GDAAKNQVA
Sbjct: 1   MGKAPAIGIDLGTTYSCVGVFQNGKVEIIANDQGNRTTPSYVGFTDTERLVGDAAKNQVA 60

Query: 239 MNPNN 253
           +NP N
Sbjct: 61  LNPEN 65



 Score =  104 bits (250), Expect = 6e-23
 Identities = 52/69 (75%), Positives = 59/69 (85%)
 Frame = +3

Query: 507 HDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGG*PFDVSI 686
           +DSQRQATKDAGTI+GLNVLR+INEPTAAA+AYGLDK  +GE+NVLIFDLGGG  FDVSI
Sbjct: 151 NDSQRQATKDAGTIAGLNVLRVINEPTAAALAYGLDKSLSGEKNVLIFDLGGG-TFDVSI 209

Query: 687 LYHSKDGIF 713
           L      +F
Sbjct: 210 LTIDDGSLF 218


>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
          Length = 1097

 Score =  138 bits (334), Expect = 4e-33
 Identities = 61/88 (69%), Positives = 73/88 (82%)
 Frame = +1

Query: 244 PQQQIFDAKRLIGRKFEDATVQADMKHWPFDVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 423
           P+  +FDAKRLIGRKF+D  V  DM HWPF V+ +G +PKI+V +KGE K+FFPEE+SSM
Sbjct: 63  PENTVFDAKRLIGRKFDDPVVARDMTHWPFHVIREGERPKIQVEFKGEKKSFFPEEISSM 122

Query: 424 VLTKMKETAEAYLGKTVQNAVITVPAYF 507
           VLTKMKETAEAYLG  V +AV+TVPAYF
Sbjct: 123 VLTKMKETAEAYLGAKVTDAVVTVPAYF 150



 Score =  134 bits (324), Expect = 7e-32
 Identities = 62/65 (95%), Positives = 63/65 (96%)
 Frame = +2

Query: 59  MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 238
           MAK PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF+DTERLIGDAAKNQVA
Sbjct: 1   MAKTPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVA 60

Query: 239 MNPNN 253
           MNP N
Sbjct: 61  MNPEN 65



 Score =  108 bits (260), Expect = 4e-24
 Identities = 57/69 (82%), Positives = 61/69 (88%)
 Frame = +3

Query: 507 HDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGG*PFDVSI 686
           HDSQRQATKDAGTI+GLNVLRIINEPTAAAIAYGLDKK   ERNVLI+DLGGG  FDVS+
Sbjct: 151 HDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGVERNVLIYDLGGG-TFDVSV 209

Query: 687 LYHSKDGIF 713
           L   +DGIF
Sbjct: 210 L-TIEDGIF 217


>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 746

 Score =  132 bits (320), Expect = 2e-31
 Identities = 60/65 (92%), Positives = 62/65 (95%)
 Frame = +2

Query: 59  MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 238
           M KAPA+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD ERL+GDAAKNQVA
Sbjct: 1   MTKAPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDEERLVGDAAKNQVA 60

Query: 239 MNPNN 253
           MNP N
Sbjct: 61  MNPTN 65



 Score =  113 bits (272), Expect = 1e-25
 Identities = 63/113 (55%), Positives = 73/113 (64%), Gaps = 25/113 (22%)
 Frame = +1

Query: 244 PQQQIFDAKRLIGRKFEDATVQADMKHWPFDVVSDGGKPKIKVAYKGEDKTFFPEEV--- 414
           P   IFDAKRLIGR+F+D  V+ DMKHW F+VV++ G+PK+KV YKGE KTFF EEV   
Sbjct: 63  PTNTIFDAKRLIGRRFDDPGVKDDMKHWSFEVVNEAGRPKVKVEYKGETKTFFAEEVVNE 122

Query: 415 ----------------------SSMVLTKMKETAEAYLGKTVQNAVITVPAYF 507
                                 SSMVL KMKETAEAYLG  V +AV+TVPAYF
Sbjct: 123 AGRPKVKVEYKGETKTFFAEEISSMVLNKMKETAEAYLGCKVTDAVVTVPAYF 175



 Score =  107 bits (256), Expect = 1e-23
 Identities = 57/69 (82%), Positives = 60/69 (86%)
 Frame = +3

Query: 507 HDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGG*PFDVSI 686
           +DSQRQATKDAG ISGLNVLRIINEPTAAAIAYGLDKK   ERNVLIFDLGGG  FDVS+
Sbjct: 244 NDSQRQATKDAGVISGLNVLRIINEPTAAAIAYGLDKKVGQERNVLIFDLGGG-TFDVSV 302

Query: 687 LYHSKDGIF 713
           L   +DGIF
Sbjct: 303 L-SIEDGIF 310



 Score = 54.4 bits (125), Expect = 9e-08
 Identities = 25/33 (75%), Positives = 29/33 (87%)
 Frame = +1

Query: 409 EVSSMVLTKMKETAEAYLGKTVQNAVITVPAYF 507
           ++SSMVL KMKETAEAYLG  V +AV+TVPAYF
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVPAYF 243


>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
          Length = 1327

 Score =  117 bits (282), Expect = 9e-27
 Identities = 55/88 (62%), Positives = 68/88 (77%)
 Frame = +1

Query: 244  PQQQIFDAKRLIGRKFEDATVQADMKHWPFDVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 423
            P+  +FDAKRLIGR ++D +VQ D+K +PF VV    KP ++V  K E KTF  EE+S+M
Sbjct: 761  PENTVFDAKRLIGRSWDDTSVQNDLKFFPFKVVDKNKKPHVQVKVKDEIKTFAAEEISAM 820

Query: 424  VLTKMKETAEAYLGKTVQNAVITVPAYF 507
            VLTKMKETAEAYLGK V +AV+TVPAYF
Sbjct: 821  VLTKMKETAEAYLGKKVTHAVVTVPAYF 848



 Score =  102 bits (244), Expect = 3e-22
 Identities = 47/60 (78%), Positives = 53/60 (88%), Gaps = 1/60 (1%)
 Frame = +2

Query: 77  VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPNN 253
           +GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAFT+  ERLIGD AKNQ+  NP N
Sbjct: 704 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTEEGERLIGDGAKNQLTTNPEN 763



 Score = 95.1 bits (226), Expect = 5e-20
 Identities = 46/61 (75%), Positives = 55/61 (90%)
 Frame = +3

Query: 507  HDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGG*PFDVSI 686
            +D+QRQATKDAG I+GL V+RIINEPTAAAIAYG+DKK  GE+N+L+FDLGGG  FDVS+
Sbjct: 849  NDAQRQATKDAGAIAGLTVMRIINEPTAAAIAYGMDKK-EGEKNILVFDLGGG-TFDVSL 906

Query: 687  L 689
            L
Sbjct: 907  L 907


>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1068

 Score = 70.1 bits (164), Expect = 2e-12
 Identities = 35/81 (43%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
 Frame = +1

Query: 268 KRLIGRKFEDATVQADMKHWPFDVVS-DGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKE 444
           KR IGRKF D  VQ ++ H P+ VV        I+V Y G+ + F PE+V +M+ T++K 
Sbjct: 127 KRFIGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLGKQEVFSPEQVMAMLFTRLKT 186

Query: 445 TAEAYLGKTVQNAVITVPAYF 507
           TAE  L   V + VI+VP+Y+
Sbjct: 187 TAEIALKTKVTDCVISVPSYY 207



 Score = 49.6 bits (113), Expect = 3e-06
 Identities = 22/52 (42%), Positives = 33/52 (63%)
 Frame = +2

Query: 77  VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ 232
           VG D+G     + V + G +E +AN+  +R TPS+V+  D +RLIG + KNQ
Sbjct: 4   VGFDVGNQSCYIAVARGGGIETVANEFSDRCTPSFVSLGDKQRLIGTSGKNQ 55



 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 22/53 (41%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
 Frame = +3

Query: 510 DSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKG---TGERNVLIFDLG 659
           D QR+   DA   +GLN LR++N+ TA ++AYG+ K+       RNV+  D+G
Sbjct: 209 DRQRRCMLDASATAGLNCLRLMNDTTAVSLAYGIYKQDLPTDKPRNVVFVDIG 261


>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
          Length = 437

 Score = 68.9 bits (161), Expect = 4e-12
 Identities = 37/66 (56%), Positives = 49/66 (74%)
 Frame = +3

Query: 516 QRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGG*PFDVSILYH 695
           QR AT  A +++G+ VLR+INEPTAAA+AYGL KK  G  NV++ DLGGG   DVS+L +
Sbjct: 184 QRNATVKAASLAGITVLRVINEPTAAALAYGLHKK-EGVANVMVVDLGGG-TLDVSLL-N 240

Query: 696 SKDGIF 713
            + G+F
Sbjct: 241 IQGGMF 246



 Score = 67.7 bits (158), Expect = 9e-12
 Identities = 30/65 (46%), Positives = 44/65 (67%), Gaps = 2/65 (3%)
 Frame = +2

Query: 65  KAPAVGIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 238
           K   +GIDLGTTYSCVG +Q   G+++I +++  ++  PS VAFTD   L+G+ A +Q  
Sbjct: 30  KPKIIGIDLGTTYSCVGAYQAISGRIDIFSDENDDKVVPSLVAFTDKGVLVGEKALSQAE 89

Query: 239 MNPNN 253
           +NP N
Sbjct: 90  INPKN 94



 Score = 57.6 bits (133), Expect = 1e-08
 Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 1/105 (0%)
 Frame = +1

Query: 244 PQQQIFDAKRLIGRKFEDATVQADMKHWPFDVVSDG-GKPKIKVAYKGEDKTFFPEEVSS 420
           P+  I+DAKR IG+ F    +    K + F V +D  G     V  KG      PEE+  
Sbjct: 92  PKNTIYDAKRFIGKTFTKQELLEIGKLYQFRVTTDKRGNAGFLVGKKGNFTVITPEEIGG 151

Query: 421 MVLTKMKETAEAYLGKTVQNAVITVPAYFMTLKDKPQKMQVPSLA 555
            V+ K++  AE  L  TV  AV++VPA F  +K +   ++  SLA
Sbjct: 152 YVIKKLRTMAERNLTTTVTKAVMSVPAEF-DIKQRNATVKAASLA 195


>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
          Length = 179

 Score = 55.2 bits (127), Expect = 5e-08
 Identities = 25/48 (52%), Positives = 37/48 (77%)
 Frame = +1

Query: 364 IKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYF 507
           I V   GE ++F PE++S++VL ++K  AEA+LG+ V+ AVITVPA+F
Sbjct: 2   IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVPAHF 49



 Score = 50.8 bits (116), Expect = 1e-06
 Identities = 37/70 (52%), Positives = 41/70 (58%), Gaps = 26/70 (37%)
 Frame = +3

Query: 507 HDSQRQATKDAGTISGLNVL------------------------RIINEPTAAAIAYGLD 614
           +D+QRQATKDAGTI+GL+VL                        RIINEPTAAAIAYGLD
Sbjct: 50  NDAQRQATKDAGTIAGLDVLSRTASERPPSRFRRRRPHGRSRVLRIINEPTAAAIAYGLD 109

Query: 615 KK--GTGERN 638
           K   G  ERN
Sbjct: 110 KARGGKAERN 119


>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
          Length = 592

 Score = 41.5 bits (93), Expect = 7e-04
 Identities = 18/28 (64%), Positives = 22/28 (78%)
 Frame = +2

Query: 128 GKVEIIANDQGNRTTPSYVAFTDTERLI 211
           G   IIAND G+R TP+ VAF+DTE+LI
Sbjct: 83  GNTTIIANDAGDRVTPAMVAFSDTEKLI 110


>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1019

 Score = 37.9 bits (84), Expect = 0.008
 Identities = 20/55 (36%), Positives = 35/55 (63%), Gaps = 4/55 (7%)
 Frame = +3

Query: 507 HDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKK----GTGERNVLIFDLG 659
           + ++R+A   A  + GLNVL+I+N  TA A+ YGL ++     T E++ + +D+G
Sbjct: 117 NQAERRALLRAAELVGLNVLQIMNSNTAVALNYGLFQQKSFNDTLEKHFMFYDMG 171



 Score = 37.5 bits (83), Expect = 0.011
 Identities = 17/50 (34%), Positives = 28/50 (56%)
 Frame = +1

Query: 358 PKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYF 507
           P +K  Y+  D TF PEE+  M+L   +   E +    +++ V+TVP +F
Sbjct: 68  PHVK-NYQQSDVTFTPEELMGMILNHSRFIGEQFADHPIKDVVLTVPPFF 116


>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
          Length = 212

 Score = 31.1 bits (67), Expect = 0.97
 Identities = 15/25 (60%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
 Frame = +2

Query: 137 EIIANDQGNRTTPSYVAFT-DTERL 208
           ++I N +G+RTTPS VAFT + ERL
Sbjct: 7   KVIENAEGSRTTPSVVAFTPEGERL 31


>SB_52667| Best HMM Match : MRP-L47 (HMM E-Value=0.0013)
          Length = 119

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 18/68 (26%), Positives = 32/68 (47%)
 Frame = +1

Query: 268 KRLIGRKFEDATVQADMKHWPFDVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKET 447
           K ++G + E A  +   + WPFDV     +   K   +   K   P + +++ +TKM+E 
Sbjct: 42  KLVLGER-ERAIQELSQQQWPFDVQDPALESTSKDLKETPIKETSPVQAATLNMTKMEEN 100

Query: 448 AEAYLGKT 471
            +   G T
Sbjct: 101 QQELSGNT 108


>SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3)
          Length = 350

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 16/33 (48%), Positives = 19/33 (57%)
 Frame = -1

Query: 245 GSSPPGSWRHLR*DARCL*TQHKTEWSCCPGRW 147
           GS PPG W   R +AR   T  +T +SC PG W
Sbjct: 206 GSCPPGFWCRKRREARAA-TDLET-YSCPPGFW 236


>SB_47707| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 627

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
 Frame = +3

Query: 423 GAYENEG-NCRSLSWQNCAECSYHGSRVLHDSQRQAT--KDAGTISGLNVLRIINEPTAA 593
           GA +N   +  SL W  C +  YHG +V+  +   A     AG  S  NV+R +  P A 
Sbjct: 512 GATQNANESLNSLVWARCPKHKYHGYKVIRCAVAAAVCHFHAGASSRENVMRRLCVP-AG 570

Query: 594 AIAYGLDKKGTG 629
               G   K TG
Sbjct: 571 HTQEGHPSKRTG 582


>SB_9053| Best HMM Match : TIG (HMM E-Value=0)
          Length = 2990

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +2

Query: 5    HVC*VVLRTSNKTD*KYKMAKAPAVGIDL 91
            HVC +V  T  K   K  ++K PA GI+L
Sbjct: 1200 HVCNIVSNTETKITCKLDVSKTPAPGIEL 1228


>SB_55989| Best HMM Match : zf-C2H2 (HMM E-Value=8e-08)
          Length = 1011

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 17/62 (27%), Positives = 27/62 (43%)
 Frame = +1

Query: 355 KPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFMTLKDKPQK 534
           +PK K   + E+     EE  +M   ++K      LGK V+  + T     +TL  + Q 
Sbjct: 654 QPKFKKTKEEEEFDKLLEEADAMTQQEVKNVKNIKLGKNVKTQLYTCEPCNITLNSQKQM 713

Query: 535 MQ 540
            Q
Sbjct: 714 SQ 715


>SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1506

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 17/58 (29%), Positives = 27/58 (46%)
 Frame = -1

Query: 452  SAVSFIFVSTMELTSSGKKVLSSPLYATLILGLPPSLTTSKGQCFMSACTVASSNLRP 279
            S   F+F ST  + +S +KV+ SPL  + +    P+     G    S C V + +  P
Sbjct: 1108 SPAKFVFTSTGIVRASTRKVVPSPLRRSKVPPTVPAQRLFNGDRVESICNVQNLSRCP 1165


>SB_45916| Best HMM Match : Cadherin (HMM E-Value=0)
          Length = 1774

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = -1

Query: 647 DKYISFSSTLFVKTVSNRSSSRFIDDSEN 561
           +K ISF  +LF+  VSN S+ R+I  +E+
Sbjct: 752 NKVISFGPSLFMDKVSNASAGRYICIAES 780


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,948,454
Number of Sequences: 59808
Number of extensions: 578559
Number of successful extensions: 1716
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1597
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1707
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1974037988
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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