Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30625
         (671 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015B5D54 Cluster: PREDICTED: hypothetical protein;...    45   0.001
UniRef50_UPI00015B59DC Cluster: PREDICTED: hypothetical protein;...    36   1.2  
UniRef50_Q9ZIQ6 Cluster: Bifunctional chemotaxis protein CheF; n...    35   1.6  
UniRef50_Q9VIU2 Cluster: CG13081-PA; n=2; Sophophora|Rep: CG1308...    33   6.3  

>UniRef50_UPI00015B5D54 Cluster: PREDICTED: hypothetical protein;
           n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
           protein - Nasonia vitripennis
          Length = 169

 Score = 45.2 bits (102), Expect = 0.001
 Identities = 19/32 (59%), Positives = 24/32 (75%)
 Frame = +3

Query: 87  DCKEEYNQSQNGTENFRVHVNGLVIAMMPAES 182
           D  + Y+Q QNGTEN+RV V+GLV  M PA+S
Sbjct: 55  DATDHYDQRQNGTENYRVKVDGLVFIMAPADS 86


>UniRef50_UPI00015B59DC Cluster: PREDICTED: hypothetical protein;
           n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
           protein - Nasonia vitripennis
          Length = 740

 Score = 35.5 bits (78), Expect = 1.2
 Identities = 18/47 (38%), Positives = 25/47 (53%)
 Frame = +2

Query: 302 EEKPQTESEVLATSENPKPTESAAPLSDISIKSDTPHNKEASVNKQK 442
           EEKP   +E    SE   PTE+A+P S  +   DT   K+   +K+K
Sbjct: 106 EEKPAEAAEAAPASEVTTPTEAASPASPNATSPDTKEAKKKDKSKKK 152


>UniRef50_Q9ZIQ6 Cluster: Bifunctional chemotaxis protein CheF;
           n=24; Epsilonproteobacteria|Rep: Bifunctional chemotaxis
           protein CheF - Helicobacter pylori (Campylobacter
           pylori)
          Length = 804

 Score = 35.1 bits (77), Expect = 1.6
 Identities = 15/47 (31%), Positives = 25/47 (53%)
 Frame = +2

Query: 302 EEKPQTESEVLATSENPKPTESAAPLSDISIKSDTPHNKEASVNKQK 442
           ++K + + EV  T E PK     AP ++   K+DT  NK  S+  ++
Sbjct: 217 QKKQEAKQEVTPTKETPKTETPKAPKTETKAKADTEENKAPSIGVEQ 263


>UniRef50_Q9VIU2 Cluster: CG13081-PA; n=2; Sophophora|Rep:
           CG13081-PA - Drosophila melanogaster (Fruit fly)
          Length = 177

 Score = 33.1 bits (72), Expect = 6.3
 Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
 Frame = +3

Query: 102 YNQSQNGTENFRVHVNGLVIAMMPAESFAESLLSAMPD--LEELL 230
           Y+Q Q G EN++  V+G+VI M P    + SLL +M +  L E+L
Sbjct: 62  YDQRQKGGENYQFKVDGVVIGMAP--QMSSSLLYSMAESYLSEML 104


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 550,566,373
Number of Sequences: 1657284
Number of extensions: 9462421
Number of successful extensions: 31681
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 29569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31603
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51652897375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)