BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS30625 (671 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AE014134-3127|AAF53823.1| 177|Drosophila melanogaster CG13081-P... 33 0.35 AE013599-1475|AAX52710.1| 1089|Drosophila melanogaster CG30048-P... 29 5.8 AE013599-1474|AAM68678.3| 1243|Drosophila melanogaster CG30048-P... 29 5.8 BT023113-1|AAY55529.1| 423|Drosophila melanogaster IP03677p pro... 29 7.6 >AE014134-3127|AAF53823.1| 177|Drosophila melanogaster CG13081-PA protein. Length = 177 Score = 33.1 bits (72), Expect = 0.35 Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 2/45 (4%) Frame = +3 Query: 102 YNQSQNGTENFRVHVNGLVIAMMPAESFAESLLSAMPD--LEELL 230 Y+Q Q G EN++ V+G+VI M P + SLL +M + L E+L Sbjct: 62 YDQRQKGGENYQFKVDGVVIGMAP--QMSSSLLYSMAESYLSEML 104 >AE013599-1475|AAX52710.1| 1089|Drosophila melanogaster CG30048-PB, isoform B protein. Length = 1089 Score = 29.1 bits (62), Expect = 5.8 Identities = 12/28 (42%), Positives = 21/28 (75%), Gaps = 1/28 (3%) Frame = -1 Query: 449 VVVFVYLRTLLYCVVYLI-LWRYRSKAP 369 +++ VYL LL +++++ L+RYRSK P Sbjct: 810 LIILVYLTALLIILLWILWLYRYRSKLP 837 >AE013599-1474|AAM68678.3| 1243|Drosophila melanogaster CG30048-PA, isoform A protein. Length = 1243 Score = 29.1 bits (62), Expect = 5.8 Identities = 12/28 (42%), Positives = 21/28 (75%), Gaps = 1/28 (3%) Frame = -1 Query: 449 VVVFVYLRTLLYCVVYLI-LWRYRSKAP 369 +++ VYL LL +++++ L+RYRSK P Sbjct: 964 LIILVYLTALLIILLWILWLYRYRSKLP 991 >BT023113-1|AAY55529.1| 423|Drosophila melanogaster IP03677p protein. Length = 423 Score = 28.7 bits (61), Expect = 7.6 Identities = 10/16 (62%), Positives = 12/16 (75%) Frame = +1 Query: 25 CMR*RRWARYWRSLRQ 72 C R RRW +WR+LRQ Sbjct: 392 CQRRRRWCCWWRTLRQ 407 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 24,598,048 Number of Sequences: 53049 Number of extensions: 443680 Number of successful extensions: 1811 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 1662 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1808 length of database: 24,988,368 effective HSP length: 82 effective length of database: 20,638,350 effective search space used: 2910007350 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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