Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30624
         (765 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   2.7  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   6.2  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    22   6.2  
AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450 ...    22   6.2  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   8.2  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    21   8.2  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = -1

Query: 417  WSGSRVMAIIEYA*LCQSITNWAFETMQYKRKTGKD 310
            W+G  +   + Y  L  S   + FET+++ R+ GK+
Sbjct: 1024 WNGDILGYYVGYR-LANSDKPYLFETVEFGREEGKE 1058



 Score = 22.2 bits (45), Expect = 4.7
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +3

Query: 456  SVNLLTSISVSPMP*RKIAAELEHQCWLVLYDRPP 560
            +V ++T+  V   P   I  E   Q  LV+Y +PP
Sbjct: 985  TVTIITAEEVPGGPPTSIRVETNDQHSLVVYWKPP 1019


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = +1

Query: 586  WRSTTGTSRWLRTTPCLEHPNTR 654
            W S+T TS W  TT       TR
Sbjct: 1042 WWSSTTTSPWWTTTTTRRTTTTR 1064


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 6/16 (37%), Positives = 9/16 (56%)
 Frame = +1

Query: 700 WTGVLENHDPIRTRDH 747
           W G  ++H P+  R H
Sbjct: 220 WAGFADSHSPLYKRPH 235


>AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 6/16 (37%), Positives = 13/16 (81%)
 Frame = +3

Query: 156 TVIKLHPFELKWGPVV 203
           T+++LH ++L + PV+
Sbjct: 85  TILQLHIYDLHYNPVI 100


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +1

Query: 367 LAQLCILNNGH 399
           + Q+C LNNGH
Sbjct: 202 IKQVCKLNNGH 212


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +1

Query: 367 LAQLCILNNGH 399
           + Q+C LNNGH
Sbjct: 27  IKQVCKLNNGH 37


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,746
Number of Sequences: 336
Number of extensions: 4909
Number of successful extensions: 14
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20546262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)