Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30624
         (765 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.            26   1.5  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    25   3.4  
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    24   5.9  

>AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.
          Length = 722

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +3

Query: 207 KYIAKTLWQSVSLMFTYSLLEGATICW 287
           KY+AK +  +  L FT S+L G +I W
Sbjct: 561 KYLAKCVPGTFLLRFTDSVLGGISIAW 587


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 371  ANRSQTGPLKPCNTN 327
            A +S+  P+KPC TN
Sbjct: 1308 AEQSELSPIKPCQTN 1322


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 10/28 (35%), Positives = 19/28 (67%)
 Frame = +3

Query: 63  ALSLANNGLDVKIISYVETDPLPEVLNN 146
           A S+A  GLD+K +++V    LP+ +++
Sbjct: 479 ATSVAARGLDIKNVNHVVNYDLPKSIDD 506



 Score = 23.4 bits (48), Expect = 7.8
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = +2

Query: 200 STQIHCQNFMAECKLNVYLFLTGRCDYLLGQNPPA 304
           +T IH      E ++ +Y F +GR D L+  +  A
Sbjct: 450 TTSIHGDRLQREREMALYDFKSGRMDVLIATSVAA 484


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 901,822
Number of Sequences: 2352
Number of extensions: 19394
Number of successful extensions: 35
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79418373
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)