Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30624
(765 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC031095-1|AAH31095.1| 464|Homo sapiens asparagine-linked glyco... 88 4e-17
BC004402-1|AAH04402.1| 464|Homo sapiens asparagine-linked glyco... 88 4e-17
AY359073-1|AAQ89432.1| 472|Homo sapiens mannosyltransferase pro... 88 4e-17
AK075373-1|BAC11576.1| 464|Homo sapiens rase). protein. 88 4e-17
AB019038-1|BAA90748.1| 464|Homo sapiens beta-1,4 mannosyltransf... 88 4e-17
AK026153-1|BAB15377.1| 347|Homo sapiens protein ( Homo sapiens ... 34 0.64
>BC031095-1|AAH31095.1| 464|Homo sapiens asparagine-linked
glycosylation 1 homolog (S. cerevisiae,
beta-1,4-mannosyltran protein.
Length = 464
Score = 87.8 bits (208), Expect = 4e-17
Identities = 39/77 (50%), Positives = 52/77 (67%)
Frame = +2
Query: 278 YLLGQNPPAIPSLPVFRLYCMVSKAQFVIDWHNYAYSIMAMTLEPDHMLVRMARSTERFF 457
Y+ QNPP +PS+ V + ++ VIDWHNY YSIM + P+H LV +A+ E+FF
Sbjct: 126 YIFLQNPPGLPSIAVCWFVGCLCGSKLVIDWHNYGYSIMGLVHGPNHPLVLLAKWYEKFF 185
Query: 458 GQSSHFNLCVTYAMKED 508
G+ SH NLCVT AM+ED
Sbjct: 186 GRLSHLNLCVTNAMRED 202
Score = 72.5 bits (170), Expect = 1e-12
Identities = 41/110 (37%), Positives = 62/110 (56%), Gaps = 1/110 (0%)
Frame = +3
Query: 18 VVLGDIGRSPRMQYHALSLANNGLDVKIISYVETDPLPEVLNNPHITVIKLHPFE-LKWG 194
VVLGD+GRSPRMQYHALSLA +G V ++ + + P E+L N I ++ L + L G
Sbjct: 38 VVLGDVGRSPRMQYHALSLAMHGFSVTLLGFCNSKPHDELLQNNRIQIVGLTELQSLAVG 97
Query: 195 PVVLKYIAKTLWQSVSLMFTYSLLEGATICWARTHPPYHPCQSFVCIAWF 344
P V +Y K + Q++ L++ E + + +PP P + + WF
Sbjct: 98 PRVFQYGVKVVLQAMYLLWKLMWREPGAYIFLQ-NPPGLPS---IAVCWF 143
>BC004402-1|AAH04402.1| 464|Homo sapiens asparagine-linked
glycosylation 1 homolog (S. cerevisiae,
beta-1,4-mannosyltran protein.
Length = 464
Score = 87.8 bits (208), Expect = 4e-17
Identities = 39/77 (50%), Positives = 52/77 (67%)
Frame = +2
Query: 278 YLLGQNPPAIPSLPVFRLYCMVSKAQFVIDWHNYAYSIMAMTLEPDHMLVRMARSTERFF 457
Y+ QNPP +PS+ V + ++ VIDWHNY YSIM + P+H LV +A+ E+FF
Sbjct: 126 YIFLQNPPGLPSIAVCWFVGCLCGSKLVIDWHNYGYSIMGLVHGPNHPLVLLAKWYEKFF 185
Query: 458 GQSSHFNLCVTYAMKED 508
G+ SH NLCVT AM+ED
Sbjct: 186 GRLSHLNLCVTNAMRED 202
Score = 72.5 bits (170), Expect = 1e-12
Identities = 41/110 (37%), Positives = 62/110 (56%), Gaps = 1/110 (0%)
Frame = +3
Query: 18 VVLGDIGRSPRMQYHALSLANNGLDVKIISYVETDPLPEVLNNPHITVIKLHPFE-LKWG 194
VVLGD+GRSPRMQYHALSLA +G V ++ + + P E+L N I ++ L + L G
Sbjct: 38 VVLGDVGRSPRMQYHALSLAMHGFSVTLLGFCNSKPHDELLQNNRIQIVGLTELQSLAVG 97
Query: 195 PVVLKYIAKTLWQSVSLMFTYSLLEGATICWARTHPPYHPCQSFVCIAWF 344
P V +Y K + Q++ L++ E + + +PP P + + WF
Sbjct: 98 PRVFQYGVKVVLQAMYLLWKLMWREPGAYIFLQ-NPPGLPS---IAVCWF 143
>AY359073-1|AAQ89432.1| 472|Homo sapiens mannosyltransferase
protein.
Length = 472
Score = 87.8 bits (208), Expect = 4e-17
Identities = 39/77 (50%), Positives = 52/77 (67%)
Frame = +2
Query: 278 YLLGQNPPAIPSLPVFRLYCMVSKAQFVIDWHNYAYSIMAMTLEPDHMLVRMARSTERFF 457
Y+ QNPP +PS+ V + ++ VIDWHNY YSIM + P+H LV +A+ E+FF
Sbjct: 134 YIFLQNPPGLPSIAVCWFVGCLCGSKLVIDWHNYGYSIMGLVHGPNHPLVLLAKWYEKFF 193
Query: 458 GQSSHFNLCVTYAMKED 508
G+ SH NLCVT AM+ED
Sbjct: 194 GRLSHLNLCVTNAMRED 210
Score = 72.5 bits (170), Expect = 1e-12
Identities = 41/110 (37%), Positives = 62/110 (56%), Gaps = 1/110 (0%)
Frame = +3
Query: 18 VVLGDIGRSPRMQYHALSLANNGLDVKIISYVETDPLPEVLNNPHITVIKLHPFE-LKWG 194
VVLGD+GRSPRMQYHALSLA +G V ++ + + P E+L N I ++ L + L G
Sbjct: 46 VVLGDVGRSPRMQYHALSLAMHGFSVTLLGFCNSKPHDELLQNNRIQIVGLTELQSLAVG 105
Query: 195 PVVLKYIAKTLWQSVSLMFTYSLLEGATICWARTHPPYHPCQSFVCIAWF 344
P V +Y K + Q++ L++ E + + +PP P + + WF
Sbjct: 106 PRVFQYGVKVVLQAMYLLWKLMWREPGAYIFLQ-NPPGLPS---IAVCWF 151
>AK075373-1|BAC11576.1| 464|Homo sapiens rase). protein.
Length = 464
Score = 87.8 bits (208), Expect = 4e-17
Identities = 39/77 (50%), Positives = 52/77 (67%)
Frame = +2
Query: 278 YLLGQNPPAIPSLPVFRLYCMVSKAQFVIDWHNYAYSIMAMTLEPDHMLVRMARSTERFF 457
Y+ QNPP +PS+ V + ++ VIDWHNY YSIM + P+H LV +A+ E+FF
Sbjct: 126 YIFLQNPPGLPSIAVCWFVGCLCGSKLVIDWHNYGYSIMGLVHGPNHPLVLLAKWYEKFF 185
Query: 458 GQSSHFNLCVTYAMKED 508
G+ SH NLCVT AM+ED
Sbjct: 186 GRLSHLNLCVTNAMRED 202
Score = 72.5 bits (170), Expect = 1e-12
Identities = 41/110 (37%), Positives = 62/110 (56%), Gaps = 1/110 (0%)
Frame = +3
Query: 18 VVLGDIGRSPRMQYHALSLANNGLDVKIISYVETDPLPEVLNNPHITVIKLHPFE-LKWG 194
VVLGD+GRSPRMQYHALSLA +G V ++ + + P E+L N I ++ L + L G
Sbjct: 38 VVLGDVGRSPRMQYHALSLAMHGFSVTLLGFCNSKPHDELLQNNRIQIVGLTELQSLAVG 97
Query: 195 PVVLKYIAKTLWQSVSLMFTYSLLEGATICWARTHPPYHPCQSFVCIAWF 344
P V +Y K + Q++ L++ E + + +PP P + + WF
Sbjct: 98 PRVFQYGVKVVLQAMYLLWKLMWREPGAYIFLQ-NPPGLPS---IAVCWF 143
>AB019038-1|BAA90748.1| 464|Homo sapiens beta-1,4
mannosyltransferase protein.
Length = 464
Score = 87.8 bits (208), Expect = 4e-17
Identities = 39/77 (50%), Positives = 52/77 (67%)
Frame = +2
Query: 278 YLLGQNPPAIPSLPVFRLYCMVSKAQFVIDWHNYAYSIMAMTLEPDHMLVRMARSTERFF 457
Y+ QNPP +PS+ V + ++ VIDWHNY YSIM + P+H LV +A+ E+FF
Sbjct: 126 YIFLQNPPGLPSIAVCWFVGCLCGSKLVIDWHNYGYSIMGLVHGPNHPLVLLAKWYEKFF 185
Query: 458 GQSSHFNLCVTYAMKED 508
G+ SH NLCVT AM+ED
Sbjct: 186 GRLSHLNLCVTNAMRED 202
Score = 72.5 bits (170), Expect = 1e-12
Identities = 41/110 (37%), Positives = 62/110 (56%), Gaps = 1/110 (0%)
Frame = +3
Query: 18 VVLGDIGRSPRMQYHALSLANNGLDVKIISYVETDPLPEVLNNPHITVIKLHPFE-LKWG 194
VVLGD+GRSPRMQYHALSLA +G V ++ + + P E+L N I ++ L + L G
Sbjct: 38 VVLGDVGRSPRMQYHALSLAMHGFSVTLLGFCNSKPHDELLQNNRIQIVGLTELQSLAVG 97
Query: 195 PVVLKYIAKTLWQSVSLMFTYSLLEGATICWARTHPPYHPCQSFVCIAWF 344
P V +Y K + Q++ L++ E + + +PP P + + WF
Sbjct: 98 PRVFQYGVKVVLQAMYLLWKLMWREPGAYIFLQ-NPPGLPS---IAVCWF 143
>AK026153-1|BAB15377.1| 347|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22500 fis, clone HRC11301. ).
Length = 347
Score = 33.9 bits (74), Expect = 0.64
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +1
Query: 550 TGHLRYSSH*RCWRSTTGTSRWLRTT 627
TGH R + RCWRST S W+RT+
Sbjct: 46 TGHRRNCTGMRCWRSTAQWSPWVRTS 71
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,647,206
Number of Sequences: 237096
Number of extensions: 2991364
Number of successful extensions: 5483
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5481
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9199990470
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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