Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30623
         (789 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66564-2|CAA91474.1|  248|Caenorhabditis elegans Hypothetical pr...   150   1e-36
Z73910-2|CAA98138.1|  248|Caenorhabditis elegans Hypothetical pr...   148   5e-36
U05038-1|AAA61872.1|  248|Caenorhabditis elegans 14-3-3 protein ...   148   5e-36
Z66564-5|CAC42300.2|  198|Caenorhabditis elegans Hypothetical pr...    72   5e-13
Z73910-3|CAA98135.1|  125|Caenorhabditis elegans Hypothetical pr...    59   4e-09
U23449-1|AAC24298.3|  488|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z69664-4|CAA93517.1|  483|Caenorhabditis elegans Hypothetical pr...    29   5.0  

>Z66564-2|CAA91474.1|  248|Caenorhabditis elegans Hypothetical
           protein F52D10.3a protein.
          Length = 248

 Score =  150 bits (363), Expect = 1e-36
 Identities = 72/85 (84%), Positives = 76/85 (89%), Gaps = 2/85 (2%)
 Frame = +1

Query: 1   PTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLL 180
           PTHPIRLGLALNFSVF+YEILN+PDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLL
Sbjct: 164 PTHPIRLGLALNFSVFFYEILNAPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLL 223

Query: 181 RDNLTLWTSDTQGDGDE--PAEGGD 249
           RDNLTLWTSD   D  +    EGG+
Sbjct: 224 RDNLTLWTSDAATDDTDANETEGGN 248


>Z73910-2|CAA98138.1|  248|Caenorhabditis elegans Hypothetical
           protein M117.2 protein.
          Length = 248

 Score =  148 bits (358), Expect = 5e-36
 Identities = 71/81 (87%), Positives = 74/81 (91%)
 Frame = +1

Query: 1   PTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLL 180
           PTHPIRLGLALNFSVFYYEILN+P+ ACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLL
Sbjct: 163 PTHPIRLGLALNFSVFYYEILNTPEHACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLL 222

Query: 181 RDNLTLWTSDTQGDGDEPAEG 243
           RDNLTLWTSD  G  D+  EG
Sbjct: 223 RDNLTLWTSDV-GAEDQEQEG 242


>U05038-1|AAA61872.1|  248|Caenorhabditis elegans 14-3-3 protein
           protein.
          Length = 248

 Score =  148 bits (358), Expect = 5e-36
 Identities = 71/81 (87%), Positives = 74/81 (91%)
 Frame = +1

Query: 1   PTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLL 180
           PTHPIRLGLALNFSVFYYEILN+P+ ACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLL
Sbjct: 163 PTHPIRLGLALNFSVFYYEILNTPEHACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLL 222

Query: 181 RDNLTLWTSDTQGDGDEPAEG 243
           RDNLTLWTSD  G  D+  EG
Sbjct: 223 RDNLTLWTSDV-GAEDQEQEG 242


>Z66564-5|CAC42300.2|  198|Caenorhabditis elegans Hypothetical
           protein F52D10.3b protein.
          Length = 198

 Score = 71.7 bits (168), Expect = 5e-13
 Identities = 31/33 (93%), Positives = 33/33 (100%)
 Frame = +1

Query: 1   PTHPIRLGLALNFSVFYYEILNSPDKACQLAKQ 99
           PTHPIRLGLALNFSVF+YEILN+PDKACQLAKQ
Sbjct: 164 PTHPIRLGLALNFSVFFYEILNAPDKACQLAKQ 196


>Z73910-3|CAA98135.1|  125|Caenorhabditis elegans Hypothetical
           protein M117.3 protein.
          Length = 125

 Score = 58.8 bits (136), Expect = 4e-09
 Identities = 36/86 (41%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
 Frame = +1

Query: 1   PTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNE--DSYKDSTLIMQ 174
           PTHPIRLGLALN S   +++LN P +A ++A+ A D A  EL+ +    DSY  S L   
Sbjct: 41  PTHPIRLGLALNASALNFDVLNLPKEANEIAQSALDSAHRELEKMKSSLDSYDISNLKRA 100

Query: 175 LLRDNLTLWTSDTQGDGDEPAEGGDN 252
               +L   T + + DG E  E  DN
Sbjct: 101 RTLYDLLKSTHEQRVDGKE-GEEADN 125


>U23449-1|AAC24298.3|  488|Caenorhabditis elegans Hypothetical
           protein K06A1.3 protein.
          Length = 488

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 26/82 (31%), Positives = 38/82 (46%)
 Frame = +1

Query: 181 RDNLTLWTSDTQGDGDEPAEGGDNYISPHSPQHTHLFSSVFIRKRVTFENVVWPGIITEA 360
           + N T+W  D +G G E +EG     SP   +  H+ SS   R   T +  +     T+ 
Sbjct: 363 KSNNTVW-EDAEGSGIEISEG-----SPAHAEAQHMTSSEGPR---TTKREIKRRDATDV 413

Query: 361 DASRRL*KC*KSFAADLPVPSK 426
           D S  +     +FAADLP P +
Sbjct: 414 DVSSDITILDSAFAADLPSPQE 435


>Z69664-4|CAA93517.1|  483|Caenorhabditis elegans Hypothetical
           protein K04D7.3 protein.
          Length = 483

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -2

Query: 647 NLLHCGSCGDRNVTWPTRLLVCK 579
           N LHCG CGDR++ +   L+  K
Sbjct: 444 NGLHCGGCGDRSLRFRPSLVYTK 466


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,156,231
Number of Sequences: 27780
Number of extensions: 342907
Number of successful extensions: 870
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 830
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 870
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)