Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30622
         (707 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015B5D54 Cluster: PREDICTED: hypothetical protein;...    45   0.002
UniRef50_UPI00015B59DC Cluster: PREDICTED: hypothetical protein;...    36   1.3  
UniRef50_Q9ZIQ6 Cluster: Bifunctional chemotaxis protein CheF; n...    35   1.7  
UniRef50_Q5BAQ7 Cluster: Putative uncharacterized protein; n=1; ...    34   3.9  
UniRef50_A2EFF7 Cluster: Putative uncharacterized protein; n=1; ...    33   9.1  

>UniRef50_UPI00015B5D54 Cluster: PREDICTED: hypothetical protein;
           n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
           protein - Nasonia vitripennis
          Length = 169

 Score = 45.2 bits (102), Expect = 0.002
 Identities = 19/32 (59%), Positives = 24/32 (75%)
 Frame = +3

Query: 129 DCKEEYNQSQNGTENFRVHVNGLVIAMMPAES 224
           D  + Y+Q QNGTEN+RV V+GLV  M PA+S
Sbjct: 55  DATDHYDQRQNGTENYRVKVDGLVFIMAPADS 86


>UniRef50_UPI00015B59DC Cluster: PREDICTED: hypothetical protein;
           n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
           protein - Nasonia vitripennis
          Length = 740

 Score = 35.5 bits (78), Expect = 1.3
 Identities = 18/47 (38%), Positives = 25/47 (53%)
 Frame = +2

Query: 344 EEKPQTESEVLATSENPKPTESAAPLSDISIKSDTPHNKEASVNKQK 484
           EEKP   +E    SE   PTE+A+P S  +   DT   K+   +K+K
Sbjct: 106 EEKPAEAAEAAPASEVTTPTEAASPASPNATSPDTKEAKKKDKSKKK 152


>UniRef50_Q9ZIQ6 Cluster: Bifunctional chemotaxis protein CheF;
           n=24; Epsilonproteobacteria|Rep: Bifunctional chemotaxis
           protein CheF - Helicobacter pylori (Campylobacter
           pylori)
          Length = 804

 Score = 35.1 bits (77), Expect = 1.7
 Identities = 15/47 (31%), Positives = 25/47 (53%)
 Frame = +2

Query: 344 EEKPQTESEVLATSENPKPTESAAPLSDISIKSDTPHNKEASVNKQK 484
           ++K + + EV  T E PK     AP ++   K+DT  NK  S+  ++
Sbjct: 217 QKKQEAKQEVTPTKETPKTETPKAPKTETKAKADTEENKAPSIGVEQ 263


>UniRef50_Q5BAQ7 Cluster: Putative uncharacterized protein; n=1;
           Emericella nidulans|Rep: Putative uncharacterized
           protein - Emericella nidulans (Aspergillus nidulans)
          Length = 785

 Score = 33.9 bits (74), Expect = 3.9
 Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
 Frame = -3

Query: 522 QQTSHIDFSLCG-RFCLFTDASLLCGVSDFMEISLKGAADSVGFGFSDVAKTSDSV*GFS 346
           Q+T H+   LCG R CL +  SLL        I L      +  G   +   S++V  + 
Sbjct: 705 QRTDHLTTELCGERSCLASFFSLL------QLIDLNLPKSDIRSGSIVLIPRSENV-DYG 757

Query: 345 SGLGGEVTIGGFGFC 301
           SG+GG+  +G FG C
Sbjct: 758 SGIGGDTALGRFGNC 772


>UniRef50_A2EFF7 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 603

 Score = 32.7 bits (71), Expect = 9.1
 Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
 Frame = +2

Query: 260 EELLESEGINQLQQQXXXXXXXXXXXXXEEKPQTESEVL-ATSENPKPTESAAPLSDISI 436
           +E  E +    LQ++             EE+PQTE E      E+P P E+ AP S  + 
Sbjct: 284 KEPKEDKTQETLQEEEKTENQDQNSSPNEEQPQTEEETAQPQEESPNPEENPAPESQST- 342

Query: 437 KSDTPHNKEASVNKQKRP 490
             D+P  +E    KQ+ P
Sbjct: 343 -EDSP-KQEEETPKQEEP 358


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 592,231,906
Number of Sequences: 1657284
Number of extensions: 10588140
Number of successful extensions: 30803
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 29258
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30737
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 56611575523
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)