Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30622
         (707 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-3127|AAF53823.1|  177|Drosophila melanogaster CG13081-P...    32   0.88 
BT023113-1|AAY55529.1|  423|Drosophila melanogaster IP03677p pro...    29   6.2  
AE013599-1475|AAX52710.1| 1089|Drosophila melanogaster CG30048-P...    29   6.2  
AE013599-1474|AAM68678.3| 1243|Drosophila melanogaster CG30048-P...    29   6.2  

>AE014134-3127|AAF53823.1|  177|Drosophila melanogaster CG13081-PA
           protein.
          Length = 177

 Score = 31.9 bits (69), Expect = 0.88
 Identities = 16/36 (44%), Positives = 23/36 (63%)
 Frame = +3

Query: 144 YNQSQNGTENFRVHVNGLVIAMMPAESFAESLLSAM 251
           Y+Q Q G EN++  V+G+VI M P    + SLL +M
Sbjct: 62  YDQRQKGGENYQFKVDGVVIGMAP--QMSSSLLYSM 95


>BT023113-1|AAY55529.1|  423|Drosophila melanogaster IP03677p
           protein.
          Length = 423

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +1

Query: 37  LSRWSTIDE*CMR*RRWARYWRSLRQ 114
           L+ WS     C R RRW  +WR+LRQ
Sbjct: 386 LASWSR----CQRRRRWCCWWRTLRQ 407


>AE013599-1475|AAX52710.1| 1089|Drosophila melanogaster CG30048-PB,
           isoform B protein.
          Length = 1089

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 12/28 (42%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
 Frame = -1

Query: 491 VVVFVYLRTLLYCVVYLI-LWRYRSKAP 411
           +++ VYL  LL  +++++ L+RYRSK P
Sbjct: 810 LIILVYLTALLIILLWILWLYRYRSKLP 837


>AE013599-1474|AAM68678.3| 1243|Drosophila melanogaster CG30048-PA,
            isoform A protein.
          Length = 1243

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 12/28 (42%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
 Frame = -1

Query: 491  VVVFVYLRTLLYCVVYLI-LWRYRSKAP 411
            +++ VYL  LL  +++++ L+RYRSK P
Sbjct: 964  LIILVYLTALLIILLWILWLYRYRSKLP 991


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,782,411
Number of Sequences: 53049
Number of extensions: 503892
Number of successful extensions: 1826
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1826
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3128965752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)