Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30621
(813 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_0753 - 20805672-20805731,20805825-20805941,20806394-208065... 99 5e-21
02_04_0360 + 22353057-22353691,22354716-22355144,22355233-223553... 99 5e-21
04_04_0141 + 23079516-23079925,23080006-23080084,23080204-230803... 97 1e-20
03_05_0881 + 28461857-28462263,28462357-28462435,28462798-284629... 95 8e-20
11_06_0036 + 19474848-19475188,19475696-19475774,19475880-194760... 93 2e-19
08_02_1026 + 23743186-23743686,23743793-23743915,23744734-237448... 89 3e-18
11_06_0360 - 22699524-22699529,22699865-22699899,22700650-227007... 76 4e-14
01_01_0767 + 5931031-5931281,5931414-5931594,5932020-5932129,593... 53 2e-07
09_01_0180 + 2632507-2634870 33 0.20
06_03_0858 + 25448807-25448815,25451253-25452038,25452956-25452991 31 0.82
03_02_0834 - 11630288-11630500,11630531-11630623,11630844-116310... 31 1.4
10_08_0608 + 19184722-19185224,19185331-19185410,19186048-191862... 30 1.9
03_01_0538 - 4038954-4039444,4040172-4040248,4040838-4040911,404... 30 1.9
11_01_0332 + 2483743-2484131,2486062-2486182,2486307-2486426,248... 30 2.5
03_02_0910 + 12317493-12317960,12319678-12319734,12320592-123206... 30 2.5
07_03_0941 - 22763733-22763970,22764077-22764213,22764282-227644... 29 3.3
09_04_0115 - 14789499-14790288,14792055-14792441,14792820-14793193 29 4.4
01_06_0443 - 29430891-29430980,29431098-29431241,29431331-294314... 29 4.4
09_04_0011 + 13703564-13703766,13704685-13705526,13705628-137057... 29 5.8
08_02_0839 + 21693348-21694853 29 5.8
05_05_0057 + 21995018-21997006 29 5.8
05_01_0131 + 888247-888771,889092-889154 29 5.8
01_06_1275 - 35910992-35911342,35912157-35912390,35912573-359126... 29 5.8
12_02_1175 + 26702744-26704507 28 7.7
11_04_0022 - 12361860-12362087,12362343-12362580,12363146-12363246 28 7.7
08_01_1042 + 10560340-10560627,10561001-10561415,10561571-10561614 28 7.7
08_01_0383 - 3405986-3407359,3409283-3410827 28 7.7
07_01_0316 + 2226010-2226256,2226956-2227047,2227143-2227180,222... 28 7.7
06_03_1191 + 28286685-28287008,28287149-28287211,28287377-282874... 28 7.7
>08_02_0753 -
20805672-20805731,20805825-20805941,20806394-20806516,
20806700-20806778,20806867-20807258
Length = 256
Score = 98.7 bits (235), Expect = 5e-21
Identities = 44/72 (61%), Positives = 54/72 (75%)
Frame = +3
Query: 288 EQKEETKGAEDKLNMIRAYRSQVEKELRDICSDILGVLDKYLIPSSQTGESKVFYYKMKG 467
EQKEE +G E+ + +I+ YR ++E EL IC IL +LD +L+PSS ESKVFY KMKG
Sbjct: 68 EQKEEGRGNEEHVTLIKEYRGKIEAELSKICDGILKLLDSHLVPSSTAAESKVFYLKMKG 127
Query: 468 DYHRYLAEFATG 503
DYHRYLAEF TG
Sbjct: 128 DYHRYLAEFKTG 139
Score = 79.0 bits (186), Expect = 4e-15
Identities = 41/53 (77%), Positives = 45/53 (84%)
Frame = +1
Query: 91 REDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVI 249
RE+NVY AKLAEQAERY+EMVE M+ VA + V ELTVEERNLLSVAYKNVI
Sbjct: 3 REENVYMAKLAEQAERYEEMVEYMEKVA-KTVDVEELTVEERNLLSVAYKNVI 54
Score = 57.2 bits (132), Expect = 1e-08
Identities = 37/100 (37%), Positives = 53/100 (53%)
Frame = +2
Query: 416 PQLTDRRIKSFLLQNEGRLPPVPGRVRDRQRRKEAAENSLVAYKAASDIAMTELPPTHPI 595
P T K F L+ +G + RKEAAE+++VAYKAA DIA+ +L PTHPI
Sbjct: 111 PSSTAAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTMVAYKAAQDIALADLAPTHPI 170
Query: 596 RLRTSRSNFFRVLLTRS*TARNRACRASPKGRLSTEAIAE 715
RL + + F V + ++AC + + EAI+E
Sbjct: 171 RLGLALN--FSVFYYEILNSPDKACNLAKQA--FDEAISE 206
>02_04_0360 +
22353057-22353691,22354716-22355144,22355233-22355311,
22355472-22355594,22356256-22356372,22356636-22356833
Length = 526
Score = 98.7 bits (235), Expect = 5e-21
Identities = 44/72 (61%), Positives = 55/72 (76%)
Frame = +3
Query: 288 EQKEETKGAEDKLNMIRAYRSQVEKELRDICSDILGVLDKYLIPSSQTGESKVFYYKMKG 467
EQKEE++G ED+ +I+ YR ++E EL IC IL +LD +L+PSS ESKVFY KMKG
Sbjct: 292 EQKEESRGNEDRCTLIKEYRGKIETELSKICDGILKLLDSHLVPSSTAPESKVFYLKMKG 351
Query: 468 DYHRYLAEFATG 503
DY+RYLAEF TG
Sbjct: 352 DYYRYLAEFKTG 363
Score = 80.2 bits (189), Expect = 2e-15
Identities = 41/53 (77%), Positives = 45/53 (84%)
Frame = +1
Query: 91 REDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVI 249
RE+NVY AKLAEQAERY+EMVE M+ VA + V ELTVEERNLLSVAYKNVI
Sbjct: 227 REENVYMAKLAEQAERYEEMVEFMEKVA-KTVDSEELTVEERNLLSVAYKNVI 278
Score = 62.9 bits (146), Expect = 3e-10
Identities = 40/100 (40%), Positives = 54/100 (54%)
Frame = +2
Query: 416 PQLTDRRIKSFLLQNEGRLPPVPGRVRDRQRRKEAAENSLVAYKAASDIAMTELPPTHPI 595
P T K F L+ +G + RK+AAEN++VAYKAA DIA+ ELPPTHPI
Sbjct: 335 PSSTAPESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELPPTHPI 394
Query: 596 RLRTSRSNFFRVLLTRS*TARNRACRASPKGRLSTEAIAE 715
RL + + F V + +RAC + + EAI+E
Sbjct: 395 RLGLALN--FSVFYYEILNSPDRACNLAKQA--FDEAISE 430
>04_04_0141 +
23079516-23079925,23080006-23080084,23080204-23080326,
23081655-23081771,23081886-23081945
Length = 262
Score = 97.5 bits (232), Expect = 1e-20
Identities = 43/72 (59%), Positives = 56/72 (77%)
Frame = +3
Query: 288 EQKEETKGAEDKLNMIRAYRSQVEKELRDICSDILGVLDKYLIPSSQTGESKVFYYKMKG 467
EQKEE++G ED++ +I+ YR ++E EL IC IL +L+ +L+PSS ESKVFY KMKG
Sbjct: 74 EQKEESRGNEDRVTLIKDYRGKIETELTKICDGILKLLESHLVPSSTAPESKVFYLKMKG 133
Query: 468 DYHRYLAEFATG 503
DY+RYLAEF TG
Sbjct: 134 DYYRYLAEFKTG 145
Score = 80.2 bits (189), Expect = 2e-15
Identities = 41/53 (77%), Positives = 45/53 (84%)
Frame = +1
Query: 91 REDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVI 249
RE+NVY AKLAEQAERY+EMVE M+ VA + V ELTVEERNLLSVAYKNVI
Sbjct: 9 REENVYMAKLAEQAERYEEMVEFMEKVA-KTVDSEELTVEERNLLSVAYKNVI 60
Score = 62.9 bits (146), Expect = 3e-10
Identities = 40/100 (40%), Positives = 54/100 (54%)
Frame = +2
Query: 416 PQLTDRRIKSFLLQNEGRLPPVPGRVRDRQRRKEAAENSLVAYKAASDIAMTELPPTHPI 595
P T K F L+ +G + RK+AAEN++VAYKAA DIA+ ELPPTHPI
Sbjct: 117 PSSTAPESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELPPTHPI 176
Query: 596 RLRTSRSNFFRVLLTRS*TARNRACRASPKGRLSTEAIAE 715
RL + + F V + +RAC + + EAI+E
Sbjct: 177 RLGLALN--FSVFYYEILNSPDRACNLAKQA--FDEAISE 212
>03_05_0881 +
28461857-28462263,28462357-28462435,28462798-28462920,
28463632-28463748,28463861-28463917
Length = 260
Score = 94.7 bits (225), Expect = 8e-20
Identities = 43/72 (59%), Positives = 54/72 (75%)
Frame = +3
Query: 288 EQKEETKGAEDKLNMIRAYRSQVEKELRDICSDILGVLDKYLIPSSQTGESKVFYYKMKG 467
EQKEE++G E + I+ YRS++E EL IC IL +LD +L+PS+ ESKVFY KMKG
Sbjct: 73 EQKEESRGNEAYVASIKEYRSRIETELSKICDGILKLLDSHLVPSATAAESKVFYLKMKG 132
Query: 468 DYHRYLAEFATG 503
DYHRYLAEF +G
Sbjct: 133 DYHRYLAEFKSG 144
Score = 79.0 bits (186), Expect = 4e-15
Identities = 41/60 (68%), Positives = 47/60 (78%)
Frame = +1
Query: 70 LSSTMSEREDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVI 249
+S + RE+NVY AKLAEQAERY+EMVE M+ VA + ELTVEERNLLSVAYKNVI
Sbjct: 1 MSPAEASREENVYMAKLAEQAERYEEMVEFMEKVA-KTTDVGELTVEERNLLSVAYKNVI 59
Score = 60.9 bits (141), Expect = 1e-09
Identities = 39/100 (39%), Positives = 53/100 (53%)
Frame = +2
Query: 416 PQLTDRRIKSFLLQNEGRLPPVPGRVRDRQRRKEAAENSLVAYKAASDIAMTELPPTHPI 595
P T K F L+ +G + RKEAAEN+LVAYK+A DIA+ +LP THPI
Sbjct: 116 PSATAAESKVFYLKMKGDYHRYLAEFKSGAERKEAAENTLVAYKSAQDIALADLPTTHPI 175
Query: 596 RLRTSRSNFFRVLLTRS*TARNRACRASPKGRLSTEAIAE 715
RL + + F V + +RAC + + +AIAE
Sbjct: 176 RLGLALN--FSVFYYEILNSPDRACNLAKQA--FDDAIAE 211
>11_06_0036 +
19474848-19475188,19475696-19475774,19475880-19476002,
19476970-19477086,19477169-19477228
Length = 239
Score = 93.5 bits (222), Expect = 2e-19
Identities = 42/74 (56%), Positives = 54/74 (72%)
Frame = +3
Query: 288 EQKEETKGAEDKLNMIRAYRSQVEKELRDICSDILGVLDKYLIPSSQTGESKVFYYKMKG 467
EQKEE +G + IR+YR ++E EL IC IL +LD +L+PS+ ESKVFY KMKG
Sbjct: 51 EQKEEGRGNDAHAATIRSYRGKIEAELARICDGILALLDSHLVPSAGAAESKVFYLKMKG 110
Query: 468 DYHRYLAEFATGND 509
DYHRYLAEF +G++
Sbjct: 111 DYHRYLAEFKSGDE 124
Score = 53.2 bits (122), Expect = 2e-07
Identities = 34/92 (36%), Positives = 50/92 (54%)
Frame = +2
Query: 440 KSFLLQNEGRLPPVPGRVRDRQRRKEAAENSLVAYKAASDIAMTELPPTHPIRLRTSRSN 619
K F L+ +G + RK+AAE+++ AYKAA DIA+ +L PTHPIRL + +
Sbjct: 102 KVFYLKMKGDYHRYLAEFKSGDERKQAAESTMNAYKAAQDIALADLAPTHPIRLGLALN- 160
Query: 620 FFRVLLTRS*TARNRACRASPKGRLSTEAIAE 715
F V + +RAC + + EAI+E
Sbjct: 161 -FSVFYYEILNSPDRACNLAKQA--FDEAISE 189
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/35 (60%), Positives = 23/35 (65%)
Frame = +1
Query: 145 EMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVI 249
E +E + A ELTVEERNLLSVAYKNVI
Sbjct: 3 EYMERVARAAGGASGGEELTVEERNLLSVAYKNVI 37
>08_02_1026 +
23743186-23743686,23743793-23743915,23744734-23744850,
23744948-23745001
Length = 264
Score = 89.4 bits (212), Expect = 3e-18
Identities = 41/72 (56%), Positives = 54/72 (75%)
Frame = +3
Query: 288 EQKEETKGAEDKLNMIRAYRSQVEKELRDICSDILGVLDKYLIPSSQTGESKVFYYKMKG 467
EQKEE +GA R+YR++VE EL +IC+ IL +LD+ L+P++ ++KVFY KMKG
Sbjct: 78 EQKEEGRGAAGHAAAARSYRARVEAELSNICAGILRLLDERLVPAAAAVDAKVFYLKMKG 137
Query: 468 DYHRYLAEFATG 503
DYHRYLAEF TG
Sbjct: 138 DYHRYLAEFKTG 149
Score = 71.3 bits (167), Expect = 8e-13
Identities = 39/55 (70%), Positives = 43/55 (78%), Gaps = 2/55 (3%)
Frame = +1
Query: 91 REDNVYKAKLAEQAERYDEMVEAMKNV--ASRNVSDNELTVEERNLLSVAYKNVI 249
RE+ VY AKLAEQAERY+EMVE M+ V A+ ELTVEERNLLSVAYKNVI
Sbjct: 10 REEMVYMAKLAEQAERYEEMVEFMEKVVTAAAAGGGGELTVEERNLLSVAYKNVI 64
Score = 53.2 bits (122), Expect = 2e-07
Identities = 38/105 (36%), Positives = 54/105 (51%)
Frame = +2
Query: 401 RQVPHPQLTDRRIKSFLLQNEGRLPPVPGRVRDRQRRKEAAENSLVAYKAASDIAMTELP 580
R VP D ++ F L+ +G + RK+AA+ +L AY+AA DIAM EL
Sbjct: 118 RLVPAAAAVDAKV--FYLKMKGDYHRYLAEFKTGAERKDAADATLAAYQAAQDIAMKELS 175
Query: 581 PTHPIRLRTSRSNFFRVLLTRS*TARNRACRASPKGRLSTEAIAE 715
PTHPIRL + + F V + +RAC + + EAI+E
Sbjct: 176 PTHPIRLGLALN--FSVFYYEILNSPDRACTLAKQA--FDEAISE 216
>11_06_0360 -
22699524-22699529,22699865-22699899,22700650-22700792,
22701165-22701220,22701367-22701454,22702737-22703037,
22704365-22704428
Length = 230
Score = 75.8 bits (178), Expect = 4e-14
Identities = 33/75 (44%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
Frame = +3
Query: 288 EQKEETKGAEDKLNM-IRAYRSQVEKELRDICSDILGVLDKYLIPSSQTGESKVFYYKMK 464
E E+ A D+ + I Y+ +VE ELR +C+++L ++ + +P + +GE+ VF+YKMK
Sbjct: 64 ESLEQKVTAGDQPGVTINGYKKKVEDELRAVCNEVLSIIAIHCLPLANSGENVVFFYKMK 123
Query: 465 GDYHRYLAEFATGND 509
GDY+RYLAEF+TG +
Sbjct: 124 GDYYRYLAEFSTGTE 138
Score = 55.6 bits (128), Expect = 4e-08
Identities = 31/56 (55%), Positives = 38/56 (67%)
Frame = +1
Query: 82 MSEREDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVI 249
M ERE V AKLAEQAERYD+MVE MK +A +V +++ EER L SV +K I
Sbjct: 1 MKEREKVVRLAKLAEQAERYDDMVEFMKTLARMDV---DMSAEERLLFSVGFKKTI 53
>01_01_0767 +
5931031-5931281,5931414-5931594,5932020-5932129,
5932212-5932360,5932686-5932738,5933168-5933260
Length = 278
Score = 53.2 bits (122), Expect = 2e-07
Identities = 30/74 (40%), Positives = 39/74 (52%)
Frame = +3
Query: 288 EQKEETKGAEDKLNMIRAYRSQVEKELRDICSDILGVLDKYLIPSSQTGESKVFYYKMKG 467
E KEETKG E + YR +VE E+ IC D++ ++DK KG
Sbjct: 45 ELKEETKGKESHVRQTAEYRRKVEAEMDKICCDVINIIDK------------------KG 86
Query: 468 DYHRYLAEFATGND 509
DY+RYLAEF TG +
Sbjct: 87 DYYRYLAEFKTGTE 100
Score = 38.7 bits (86), Expect = 0.005
Identities = 22/34 (64%), Positives = 24/34 (70%)
Frame = +1
Query: 148 MVEAMKNVASRNVSDNELTVEERNLLSVAYKNVI 249
MVEAM +VA D LT EERNLLSV YKN+I
Sbjct: 1 MVEAMNSVAKL---DEGLTKEERNLLSVGYKNLI 31
>09_01_0180 + 2632507-2634870
Length = 787
Score = 33.5 bits (73), Expect = 0.20
Identities = 24/76 (31%), Positives = 34/76 (44%)
Frame = +1
Query: 466 ATTTGTWPSSRPATTQGGCRELAGRVQGSLRHRHDRTAPHPPHPPSDFALKLLPCSTNEI 645
AT+T P+SRP+ G + + SL R P PP PP+ + P S
Sbjct: 191 ATSTPE-PTSRPSPAALGASAVVAGLGPSLPARPFPKKPSPPPPPAQQQQSVPPMSKFN- 248
Query: 646 LNSPEPRLPGFAKRPP 693
+ P P+L F+ PP
Sbjct: 249 PSPPSPKLVPFSNSPP 264
>06_03_0858 + 25448807-25448815,25451253-25452038,25452956-25452991
Length = 276
Score = 31.5 bits (68), Expect = 0.82
Identities = 17/47 (36%), Positives = 20/47 (42%)
Frame = +1
Query: 487 PSSRPATTQGGCRELAGRVQGSLRHRHDRTAPHPPHPPSDFALKLLP 627
PSSRPAT+ G Q H+H R + P DF K P
Sbjct: 65 PSSRPATSSGHRESQRHHQQPPGSHQHHRRSGSVASDPGDFQSKFAP 111
>03_02_0834 -
11630288-11630500,11630531-11630623,11630844-11631050,
11631301-11633089,11633817-11634145
Length = 876
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +1
Query: 88 EREDNVYKAKLAEQAERYDEMVEAMKNVASRNVS-DNELTVEERNLLSVAYK 240
+R N + KLAE + E ++ +A +NVS E+T+ E N + V+ K
Sbjct: 396 DRRSNDWSVKLAEFQSEEQRLRERVRELAEQNVSFQREVTLLESNRIDVSNK 447
>10_08_0608 +
19184722-19185224,19185331-19185410,19186048-19186235,
19187021-19187927,19188015-19188142,19189270-19189356,
19189422-19189472,19189582-19189668,19189746-19189873,
19190469-19190608,19190721-19190882,19190964-19192733,
19192807-19192922,19193077-19193227,19193243-19193371,
19193598-19194139
Length = 1722
Score = 30.3 bits (65), Expect = 1.9
Identities = 20/63 (31%), Positives = 28/63 (44%)
Frame = +1
Query: 580 PHPPHPPSDFALKLLPCSTNEILNSPEPRLPGFAKRPPFYGSYRRNLDNASRREELTKEF 759
P PPHPP L+ P ST ++ P P PP G + A+ R+E +
Sbjct: 28 PPPPHPPPPPPLEPAPPSTPQLRGEASPPPP----PPPPVGPPGAAVVAAAARKEASASA 83
Query: 760 QGF 768
+GF
Sbjct: 84 EGF 86
>03_01_0538 -
4038954-4039444,4040172-4040248,4040838-4040911,
4041115-4041203,4041481-4041563,4041645-4042233,
4042915-4043101
Length = 529
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/52 (32%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Frame = -2
Query: 680 AKPGRRGSGLFRISLVEHGRSLSA-KSEGGWGGWGAVRSWRCRRLPCTRPAS 528
A G RG+ L H A +S GG GG GA +W RP +
Sbjct: 460 ASDGHRGAHLLHGLQYAHAMKFEAGESSGGGGGDGATTNWMAAAAAAARPVA 511
>11_01_0332 +
2483743-2484131,2486062-2486182,2486307-2486426,
2486897-2487127,2487205-2487783
Length = 479
Score = 29.9 bits (64), Expect = 2.5
Identities = 21/61 (34%), Positives = 27/61 (44%)
Frame = +1
Query: 523 RELAGRVQGSLRHRHDRTAPHPPHPPSDFALKLLPCSTNEILNSPEPRLPGFAKRPPFYG 702
+ L GR + +L D + PH PSD + PC T E L E R P F + P
Sbjct: 311 KTLKGRQESNLE---DTSLPHKD--PSDESGHHKPCLTLESLLEEESRRPSFVEEEPILN 365
Query: 703 S 705
S
Sbjct: 366 S 366
>03_02_0910 +
12317493-12317960,12319678-12319734,12320592-12320666,
12321219-12321299,12321472-12321546,12321818-12321862,
12321975-12322064,12322153-12322254,12322366-12322420,
12324966-12325027,12325521-12325555,12325877-12326115,
12326219-12328035
Length = 1066
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/39 (46%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 496 RPA-TTQGGCRELAGRVQGSLRHRHDRTAPHPPHPPSDF 609
+PA TT+G C V + R D TAP PP PPS F
Sbjct: 28 KPAPTTRGPCPSPRTLVARAAPRRDDSTAP-PPPPPSTF 65
>07_03_0941 -
22763733-22763970,22764077-22764213,22764282-22764470,
22765238-22765756,22766319-22767357,22767665-22767759,
22768253-22768357
Length = 773
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +3
Query: 339 AYRSQVEKELRDICSDILGVLD 404
AY+SQ EK +R ICS++L + D
Sbjct: 28 AYQSQTEKGIRKICSELLELKD 49
>09_04_0115 - 14789499-14790288,14792055-14792441,14792820-14793193
Length = 516
Score = 29.1 bits (62), Expect = 4.4
Identities = 23/77 (29%), Positives = 30/77 (38%), Gaps = 1/77 (1%)
Frame = +1
Query: 466 ATTTGTWPSSRPATTQGGCRELAGRVQGSLRHRHDRTAPHPPHPPSDFALKLLPCSTNEI 645
ATT G P++ P T + +Q S PP P+ A +L S
Sbjct: 48 ATTLGASPAAAPPTGPASSPAASPALQTSAAAAASLVVVEPPASPTSAAATILGASPAPA 107
Query: 646 L-NSPEPRLPGFAKRPP 693
L SPE +P A PP
Sbjct: 108 LPTSPETSIP--APPPP 122
>01_06_0443 -
29430891-29430980,29431098-29431241,29431331-29431401,
29431502-29431601,29432509-29432539,29432641-29432738,
29432868-29433005
Length = 223
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +3
Query: 387 ILGVLDKYLIPSSQTGESKVFYYKMKGDYHRYLAEFATGNDA 512
+LGV+ K L+P+ +G S V K+ D H AE A +DA
Sbjct: 77 VLGVIPKALMPTEISGAS-VGEVKIVSDMHERKAEMARQSDA 117
>09_04_0011 +
13703564-13703766,13704685-13705526,13705628-13705704,
13706294-13706339,13706479-13706722,13710078-13710150,
13711119-13711235
Length = 533
Score = 28.7 bits (61), Expect = 5.8
Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Frame = -2
Query: 692 GGLLAKPGRRGSGLFRISLVEHGRSLS--AKSEGGWGGWGAVRSWRCRRLPCTRPASSRQ 519
G + G G G+ + EHGRS S A S G GG G + TR ++S +
Sbjct: 412 GDSMCLRGGGGGGVAAAAFAEHGRSASEGAASSVGGGGGGDMDQSSAGNTSTTRWSNSSR 471
Query: 518 PP 513
P
Sbjct: 472 DP 473
>08_02_0839 + 21693348-21694853
Length = 501
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +1
Query: 67 HLSSTMSEREDNVYKAKLAEQAERYDEMVEAMK 165
HLS M + E+ + K AE AE+ DE+V ++K
Sbjct: 235 HLSLVMEQEEEAEPEQKHAEAAEKADEVVVSVK 267
>05_05_0057 + 21995018-21997006
Length = 662
Score = 28.7 bits (61), Expect = 5.8
Identities = 19/52 (36%), Positives = 23/52 (44%)
Frame = -2
Query: 680 AKPGRRGSGLFRISLVEHGRSLSAKSEGGWGGWGAVRSWRCRRLPCTRPASS 525
A PGRR + R SL + +GG GG GAV S +P R S
Sbjct: 52 AAPGRRSTSAIR-SLFSRPFVAAGGGDGGGGGGGAVPSGSSAAVPDLRRCKS 102
>05_01_0131 + 888247-888771,889092-889154
Length = 195
Score = 28.7 bits (61), Expect = 5.8
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +1
Query: 580 PHPPHPPSDF-ALKLLPCSTNEILNSPEPRLPGFAKRPPFYGSYRRNLDNASRREEL 747
P PP P S+F L+ +P + I + P P P + P + + L AS+++ L
Sbjct: 134 PPPPPPLSEFPVLREVPSGPDPITSDPPPPPPPLTEFPILRKVHHKALGIASKQDGL 190
>01_06_1275 -
35910992-35911342,35912157-35912390,35912573-35912653,
35913162-35913407,35913502-35913617,35914813-35915032
Length = 415
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = -2
Query: 683 LAKPGRRGSGLFRISLVEHGRSLSAKSEGGWGGWGAVRSWR 561
+A G G L +S VE G S +GG G A +SWR
Sbjct: 5 VAGGGEEGEELLLLSAVEAG-SFGGGGDGGGAGAAAEKSWR 44
>12_02_1175 + 26702744-26704507
Length = 587
Score = 28.3 bits (60), Expect = 7.7
Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +1
Query: 490 SSRPATTQGGCRELAGRVQGSLRHRHDRT-APHPPHPPSDFALKLLPC 630
SS P ++ GGCREL R R+ R AP P D+ L+LL C
Sbjct: 55 SSSPDSSSGGCRELQALDGDGARCRYLRAHAPCAPVGYVDY-LRLLYC 101
>11_04_0022 - 12361860-12362087,12362343-12362580,12363146-12363246
Length = 188
Score = 28.3 bits (60), Expect = 7.7
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Frame = +1
Query: 592 HPPSDFALKLLPCSTNEI-LNSPEPRLPGFAKRP-PFYGSYRRNLDNASRREELTKEFQ- 762
H P+D+ + L P NEI L +PE L + F R + S E + +
Sbjct: 66 HGPNDYLIFLFPGYANEITLPNPEFHLYNCRELTISFQAELPREVPRRSPLEGIWENSSG 125
Query: 763 GFIHCNLLAGDKTLTL 810
G+IH L AG++ TL
Sbjct: 126 GWIHLELQAGNEQHTL 141
>08_01_1042 + 10560340-10560627,10561001-10561415,10561571-10561614
Length = 248
Score = 28.3 bits (60), Expect = 7.7
Identities = 19/44 (43%), Positives = 22/44 (50%)
Frame = +2
Query: 482 PGRVRDRQRRKEAAENSLVAYKAASDIAMTELPPTHPIRLRTSR 613
PGR R R RR A A A+ +A L + P RLRTSR
Sbjct: 155 PGR-RSRPRRCLAGRPQATAGSPAARLAARRLRTSPPPRLRTSR 197
>08_01_0383 - 3405986-3407359,3409283-3410827
Length = 972
Score = 28.3 bits (60), Expect = 7.7
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2
Query: 599 GGWGGWGAVRSWRCRRLP 546
GG G WGAV +WR + +P
Sbjct: 228 GGGGTWGAVYAWRIQLVP 245
>07_01_0316 +
2226010-2226256,2226956-2227047,2227143-2227180,
2227289-2227450,2227540-2227562,2227673-2227744,
2227858-2228025,2228318-2228400,2228533-2228595,
2228735-2228917
Length = 376
Score = 28.3 bits (60), Expect = 7.7
Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Frame = +3
Query: 645 PEQPGTAPAGLRQKAAFLRKLSPKLGQRFSEGRTYKGIPRLHSLQ-LACGG 794
PE+P T P FL KL P + + G +Y P SL L C G
Sbjct: 276 PEKPPTGPRANTYTPEFLTKLQPLMNRIKEIGESYGKNPTQVSLNWLTCQG 326
>06_03_1191 +
28286685-28287008,28287149-28287211,28287377-28287461,
28287561-28287623,28287954-28288029,28288190-28288223,
28289553-28289659,28289738-28289807,28289852-28289950
Length = 306
Score = 28.3 bits (60), Expect = 7.7
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 6/57 (10%)
Frame = +1
Query: 559 HRHDRTAPHPPHPPS------DFALKLLPCSTNEILNSPEPRLPGFAKRPPFYGSYR 711
+RH PHPP PP+ D A + LP +E+ LPG AK Y +R
Sbjct: 35 YRHHAYPPHPPPPPAYVGAYYDHAAEPLP-PRDELRTLFIAGLPGDAKAREVYNLFR 90
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,763,362
Number of Sequences: 37544
Number of extensions: 585014
Number of successful extensions: 2578
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 2321
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2562
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2221181676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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