Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30621
(813 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_34217| Best HMM Match : No HMM Matches (HMM E-Value=.) 82 5e-16
SB_37955| Best HMM Match : 14-3-3 (HMM E-Value=6.5861e-44) 73 4e-13
SB_34219| Best HMM Match : No HMM Matches (HMM E-Value=.) 72 5e-13
SB_36368| Best HMM Match : 14-3-3 (HMM E-Value=0) 66 2e-11
SB_34218| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 1e-05
SB_42486| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 34 0.12
SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) 32 0.64
SB_33821| Best HMM Match : zf-MIZ (HMM E-Value=1.3e-29) 30 2.6
SB_53071| Best HMM Match : TSP_1 (HMM E-Value=4.3e-05) 29 3.4
SB_36640| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_19076| Best HMM Match : HECT (HMM E-Value=0) 29 4.5
SB_54793| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.9
SB_50966| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.9
SB_37483| Best HMM Match : Drf_FH1 (HMM E-Value=6.6) 29 5.9
SB_2776| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.8
SB_46776| Best HMM Match : Deltaretro_Tax (HMM E-Value=7.4) 28 7.8
SB_29939| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.8
SB_7622| Best HMM Match : Arfaptin (HMM E-Value=0) 28 7.8
>SB_34217| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 219
Score = 82.2 bits (194), Expect = 5e-16
Identities = 33/71 (46%), Positives = 54/71 (76%)
Frame = +3
Query: 297 EETKGAEDKLNMIRAYRSQVEKELRDICSDILGVLDKYLIPSSQTGESKVFYYKMKGDYH 476
EE L +++ Y++ +EKEL+D+C ++LG+L++ LIP ++ E+KVFY+K+KGDY+
Sbjct: 147 EEKTAESSSLAIVKKYKACIEKELKDLCKEVLGILER-LIPGAEDEENKVFYFKLKGDYY 205
Query: 477 RYLAEFATGND 509
RYLAEF+ G +
Sbjct: 206 RYLAEFSHGQE 216
Score = 58.4 bits (135), Expect = 6e-09
Identities = 29/56 (51%), Positives = 40/56 (71%)
Frame = +1
Query: 82 MSEREDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVI 249
M RE +Y AKL+EQ +RYDEM + MK V+ + +L+ EERNLLSV+YKN++
Sbjct: 81 MVVRETLIYNAKLSEQCDRYDEMAKIMKEVSEKY---PKLSKEERNLLSVSYKNIV 133
>SB_37955| Best HMM Match : 14-3-3 (HMM E-Value=6.5861e-44)
Length = 251
Score = 72.5 bits (170), Expect = 4e-13
Identities = 36/56 (64%), Positives = 45/56 (80%)
Frame = +1
Query: 82 MSEREDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVI 249
M+++E++VY AKLAEQAERYD+MV +MK VA EL+ E+RNLLSVAYKNVI
Sbjct: 1 MADKEEHVYMAKLAEQAERYDDMVNSMKEVAKMG---TELSTEDRNLLSVAYKNVI 53
Score = 67.7 bits (158), Expect = 1e-11
Identities = 34/59 (57%), Positives = 44/59 (74%), Gaps = 1/59 (1%)
Frame = +3
Query: 288 EQKEETKGAE-DKLNMIRAYRSQVEKELRDICSDILGVLDKYLIPSSQTGESKVFYYKM 461
EQKEE+KG + KL MIR YR +E+EL+ IC +IL +LD LI +SQ+ ESKVFY K+
Sbjct: 67 EQKEESKGEDMAKLEMIRNYRKTIEEELKTICGEILSLLDDSLIKNSQSEESKVFYNKI 125
>SB_34219| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 309
Score = 72.1 bits (169), Expect = 5e-13
Identities = 31/68 (45%), Positives = 46/68 (67%)
Frame = +3
Query: 294 KEETKGAEDKLNMIRAYRSQVEKELRDICSDILGVLDKYLIPSSQTGESKVFYYKMKGDY 473
+++ +G+E K YR +E EL ++C +L +L+ LIP++Q+ ESKVFY KMKGDY
Sbjct: 45 EQKLEGSERKKQNTETYRQTIENELNEVCETVLKLLESKLIPNAQSTESKVFYLKMKGDY 104
Query: 474 HRYLAEFA 497
+RY E A
Sbjct: 105 YRYEGEVA 112
Score = 42.3 bits (95), Expect = 4e-04
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Frame = +2
Query: 407 VPHPQLTDRRIKSFLLQNEGRLPPVPGRVRDRQRRKEAAENSLVAYKAASDIAMTE--LP 580
+P+ Q T+ ++ F L+ +G G V RR+E + ++ AY A +IA + LP
Sbjct: 85 IPNAQSTESKV--FYLKMKGDYYRYEGEVAGADRRREVVQKAMKAYSEAQEIAEKDPKLP 142
Query: 581 PTHPIRL 601
PT PIRL
Sbjct: 143 PTDPIRL 149
Score = 33.1 bits (72), Expect = 0.28
Identities = 19/34 (55%), Positives = 23/34 (67%)
Frame = +1
Query: 148 MVEAMKNVASRNVSDNELTVEERNLLSVAYKNVI 249
M +AMK +S+ L EERNLLSVAYKNV+
Sbjct: 1 MAKAMKEATE--ISET-LEQEERNLLSVAYKNVV 31
>SB_36368| Best HMM Match : 14-3-3 (HMM E-Value=0)
Length = 248
Score = 66.5 bits (155), Expect = 2e-11
Identities = 30/72 (41%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Frame = +3
Query: 300 ETKGAEDKLNMIRAYRSQVEKELRDICSDILGVLDKYLIPSSQTG---ESKVFYYKMKGD 470
E K E+ + + YR + EL C+++L +L+ YL+ Q E+KVFY KM+GD
Sbjct: 74 EQKAPEEMAALTKKYREDITNELNGKCAEVLDILENYLLKDGQDDINTEAKVFYLKMRGD 133
Query: 471 YHRYLAEFATGN 506
YHRYL E A G+
Sbjct: 134 YHRYLVEVAEGD 145
Score = 59.7 bits (138), Expect = 3e-09
Identities = 31/53 (58%), Positives = 38/53 (71%)
Frame = +1
Query: 91 REDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVI 249
RE+ ++ AK+AEQAERYD+MV AM V N+ EERNLLSVAYKNV+
Sbjct: 11 REELIHLAKMAEQAERYDDMVNAMSAVTKEGKPLND---EERNLLSVAYKNVV 60
Score = 34.3 bits (75), Expect = 0.12
Identities = 24/54 (44%), Positives = 27/54 (50%)
Frame = +2
Query: 440 KSFLLQNEGRLPPVPGRVRDRQRRKEAAENSLVAYKAASDIAMTELPPTHPIRL 601
K F L+ G V + RKE E S AYK AS A EL P+HPIRL
Sbjct: 124 KVFYLKMRGDYHRYLVEVAEGDSRKENIEKSREAYKDASAKA-EELSPSHPIRL 176
>SB_34218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 607
Score = 47.6 bits (108), Expect = 1e-05
Identities = 29/65 (44%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Frame = +1
Query: 64 NHLSSTMS---EREDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVA 234
NH S + R + V AKLAEQ ER+++++ MK N S N+ E RNLLSV
Sbjct: 178 NHPSGVVQMQDSRNELVQLAKLAEQTERFEDVILYMKKAIEINPSLNK---EHRNLLSVG 234
Query: 235 YKNVI 249
YKNV+
Sbjct: 235 YKNVV 239
>SB_42486| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 1554
Score = 34.3 bits (75), Expect = 0.12
Identities = 23/80 (28%), Positives = 36/80 (45%)
Frame = +1
Query: 493 SRPATTQGGCRELAGRVQGSLRHRHDRTAPHPPHPPSDFALKLLPCSTNEILNSPEPRLP 672
++P T G E + R+D + P P PP D L LP ++I+NSP P +P
Sbjct: 1170 NKPRETPDGYEEALPTARAESSLRYDTSLP--PLPPPDDPLPPLP--DDDIMNSPLPSIP 1225
Query: 673 GFAKRPPFYGSYRRNLDNAS 732
+ G YR +++
Sbjct: 1226 PSYEEAVKPGDYRNGSQSSN 1245
>SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)
Length = 3071
Score = 31.9 bits (69), Expect = 0.64
Identities = 12/39 (30%), Positives = 26/39 (66%)
Frame = +3
Query: 291 QKEETKGAEDKLNMIRAYRSQVEKELRDICSDILGVLDK 407
Q++E + A++K+N + AY++ E++LR+ D++ K
Sbjct: 2029 QEQELQSAKNKINRLEAYKTSYEEKLRNQQEDLVAAQQK 2067
>SB_33821| Best HMM Match : zf-MIZ (HMM E-Value=1.3e-29)
Length = 1202
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = +1
Query: 466 ATTTGTWPSSRPATTQGGCRELAGRVQGSLRHRHDRTAPHPPHPPSDF 609
AT T T ++ A Q + G G ++ ++ PHP HPP +
Sbjct: 467 ATATATATATATAALQEQQMDPYGYQTGQNQYNQNQQVPHPQHPPPPY 514
>SB_53071| Best HMM Match : TSP_1 (HMM E-Value=4.3e-05)
Length = 755
Score = 29.5 bits (63), Expect = 3.4
Identities = 20/58 (34%), Positives = 28/58 (48%)
Frame = -1
Query: 717 VSAIASVERRPFGEARQARFRAVQDLVSRTRKKFEREVRRRMGWVGGSSVMAMSEAAL 544
VSA+ ER+ F R R R +++ V R R ER +R R+ AM E A+
Sbjct: 682 VSALFERERKRFMRERVMRERVMRERVMRERAMRERAMRERVMRERAMRERAMRERAM 739
>SB_36640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 283
Score = 29.5 bits (63), Expect = 3.4
Identities = 18/47 (38%), Positives = 20/47 (42%)
Frame = -3
Query: 226 TAGSSPPLSAHCRTRCVMLHSSSPPPFRHSAQPAQLTLLYTHYLPFP 86
TA S PP +A C T C + P P P T L H LP P
Sbjct: 40 TALSPPPATALCPTPC---YGPVPHPLLRPCVPPPATALVPHPLPRP 83
>SB_19076| Best HMM Match : HECT (HMM E-Value=0)
Length = 2018
Score = 29.1 bits (62), Expect = 4.5
Identities = 32/104 (30%), Positives = 41/104 (39%), Gaps = 3/104 (2%)
Frame = +1
Query: 502 ATTQGGCRELAGRVQGSLRHRHDRTAP--H-PPHPPSDFALKLLPCSTNEILNSPEPRLP 672
++ G C LA V G L D P H PP PP D + S ++ +S LP
Sbjct: 348 SSVSGECY-LADSVHGRLEGDDDAPIPTLHWPPDPPGDCRATIQRIS-QQVEDSNSEELP 405
Query: 673 GFAKRPPFYGSYRRNLDNASRREELTKEFQGFIHCNLLAGDKTL 804
A P S +AS E LTK+ + LL K L
Sbjct: 406 PLASSTPAGPS------SASTEEPLTKQAKALKCLRLLCDSKAL 443
>SB_54793| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 523
Score = 28.7 bits (61), Expect = 5.9
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +1
Query: 538 RVQGSLRHRHDRTAPHPP-HPPSDFALKLLPCSTNEILNSPEPRLPGFAKRPP 693
R G +RH + +A F KL+P S++ +L S R PG RPP
Sbjct: 294 RRHGDMRHSRNNSADMMDVQSVPGFHGKLMPASSDSVLGSERVRTPG--SRPP 344
>SB_50966| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 144
Score = 28.7 bits (61), Expect = 5.9
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 8/58 (13%)
Frame = +2
Query: 482 PGRVRDRQRRKEAAENSLVAY-----KAASD---IAMTELPPTHPIRLRTSRSNFFRV 631
P + ++ R++ +E LVAY ++ SD + ELPPT R +TS+++ FRV
Sbjct: 3 PKKAKNGLRKEADSEQLLVAYSGNEQESDSDSDRVQPLELPPTRLRRPKTSKTSAFRV 60
>SB_37483| Best HMM Match : Drf_FH1 (HMM E-Value=6.6)
Length = 237
Score = 28.7 bits (61), Expect = 5.9
Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = -3
Query: 166 SSSPPPFRH-SAQPAQLTLLYTHYLPFPTLWMTNDFTLTKSESPGHLF 26
+S P P+ S QPA T YT Y P T+ T + SP F
Sbjct: 73 ASQPAPYTPASGQPASYTPAYTPYTPASTVGRMPPTTSQSTPSPAPFF 120
>SB_2776| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1792
Score = 28.3 bits (60), Expect = 7.8
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = +1
Query: 79 TMSEREDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAY 237
T+SERE KA++ A E A ++A + ++NE +E R+L +A+
Sbjct: 788 TISEREAIANKARIRSGALTLSETGPAFVDLALKVPAENEEKLENRDLEEMAW 840
>SB_46776| Best HMM Match : Deltaretro_Tax (HMM E-Value=7.4)
Length = 332
Score = 28.3 bits (60), Expect = 7.8
Identities = 22/83 (26%), Positives = 34/83 (40%), Gaps = 4/83 (4%)
Frame = +1
Query: 433 ENQKFFITK*RATTTGTWPSSRPATTQGGCRELAG----RVQGSLRHRHDRTAPHPPHPP 600
EN + + K R T P +PA Q R + + S+ + D+ PHPP P
Sbjct: 107 ENSQESLPKIRVTKPKNAPLKKPAHAQKVYRSYSAGDIFNIDTSVSVKEDKLVPHPPPPQ 166
Query: 601 SDFALKLLPCSTNEILNSPEPRL 669
+ P + + L P PR+
Sbjct: 167 TK-----KPRARSVSLCGPSPRI 184
>SB_29939| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1122
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +1
Query: 97 DNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLL 225
D VY+ L RY+E+V + N + +N TV +R ++
Sbjct: 80 DEVYRPYLTTDETRYNEVVFVVDNTVYQRYHNNTKTVTDRVII 122
>SB_7622| Best HMM Match : Arfaptin (HMM E-Value=0)
Length = 641
Score = 28.3 bits (60), Expect = 7.8
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = -1
Query: 702 SVERRPFGEARQARFRAVQDLVSRTRKKFER 610
S E P R +FR VQ V RT+KKFE+
Sbjct: 204 SKELDPEEWKRLDKFREVQSQVKRTKKKFEK 234
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,326,816
Number of Sequences: 59808
Number of extensions: 577084
Number of successful extensions: 2053
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1849
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2044
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2263654701
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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