Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30620
(481 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P41042 Cluster: 40S ribosomal protein S4; n=38; Eukaryo... 144 9e-34
UniRef50_P62701 Cluster: 40S ribosomal protein S4, X isoform; n=... 142 5e-33
UniRef50_UPI00005A08FF Cluster: PREDICTED: similar to 40S riboso... 135 4e-31
UniRef50_UPI000065EA48 Cluster: similar to 40S ribosomal protein... 125 4e-28
UniRef50_P49204 Cluster: 40S ribosomal protein S4-2; n=55; Eukar... 120 1e-26
UniRef50_UPI0000499069 Cluster: 40S ribosomal protein S4; n=2; E... 109 2e-23
UniRef50_UPI0000D9EB72 Cluster: PREDICTED: similar to 40S riboso... 109 3e-23
UniRef50_Q9XG32 Cluster: 40S ribosomal protein S4; n=1; Guillard... 109 3e-23
UniRef50_UPI00006CBCC9 Cluster: Ribosomal family S4e containing ... 101 1e-20
UniRef50_A2ECC6 Cluster: 40S ribosomal protein S4-C, putative; n... 89 6e-17
UniRef50_Q7KJQ3 Cluster: 40S ribosomal protein S4; n=9; Eukaryot... 76 5e-13
UniRef50_Q56230 Cluster: 30S ribosomal protein S4e; n=3; Thermop... 57 2e-07
UniRef50_Q40941 Cluster: 40S ribosomal protein S4; n=2; Bigelowi... 54 2e-06
UniRef50_Q8SRB9 Cluster: 40S RIBOSOMAL PROTEIN S4; n=1; Encephal... 51 1e-05
UniRef50_A1RWS3 Cluster: Ribosomal protein S4E, central; n=1; Th... 46 3e-04
UniRef50_Q6L1B5 Cluster: 30S ribosomal protein S4e; n=1; Picroph... 46 4e-04
UniRef50_A5UL76 Cluster: Ribosomal protein S4e; n=2; Methanobact... 46 6e-04
UniRef50_Q9YF85 Cluster: 30S ribosomal protein S4e; n=4; Desulfu... 44 0.001
UniRef50_Q12ZT9 Cluster: Ribosomal protein S4E; n=1; Methanococc... 43 0.003
UniRef50_A3CT09 Cluster: Ribosomal protein S4E, central; n=3; Me... 43 0.004
UniRef50_Q2VZ09 Cluster: Predicted SAM-dependent methyltransfera... 42 0.007
UniRef50_Q8PV38 Cluster: 30S ribosomal protein S4e; n=4; Euryarc... 41 0.013
UniRef50_A6WAT7 Cluster: Putative uncharacterized protein; n=1; ... 39 0.051
UniRef50_A6PQ76 Cluster: Putative uncharacterized protein; n=1; ... 39 0.051
UniRef50_A7ATI1 Cluster: Putative uncharacterized protein; n=1; ... 39 0.051
UniRef50_UPI000038E22A Cluster: hypothetical protein Faci_030011... 39 0.067
UniRef50_Q9KI91 Cluster: VrrB; n=17; Bacteria|Rep: VrrB - Bacill... 38 0.12
UniRef50_Q673R6 Cluster: Ribosomal protein S4; n=2; environmenta... 38 0.12
UniRef50_Q9KI83 Cluster: VrrB; n=9; Bacillus cereus group|Rep: V... 37 0.20
UniRef50_Q0W1X6 Cluster: 30S ribosomal protein S4E; n=2; Euryarc... 37 0.20
UniRef50_P62428 Cluster: 30S ribosomal protein S4e; n=12; Euryar... 37 0.20
UniRef50_A4M369 Cluster: Cobyrinic acid a,c-diamide synthase; n=... 36 0.36
UniRef50_Q17LX3 Cluster: Putative uncharacterized protein; n=1; ... 36 0.36
UniRef50_Q4QD98 Cluster: Putative uncharacterized protein; n=3; ... 36 0.47
UniRef50_A5KAS9 Cluster: Tryptophan-rich antigen; n=3; cellular ... 36 0.47
UniRef50_O05634 Cluster: 30S ribosomal protein S4e; n=5; Sulfolo... 36 0.47
UniRef50_A7DDI7 Cluster: Putative uncharacterized protein; n=2; ... 36 0.62
UniRef50_Q8BY81 Cluster: 3 days neonate thymus cDNA, RIKEN full-... 35 0.82
UniRef50_UPI0000DB7528 Cluster: PREDICTED: similar to Homeobox p... 35 1.1
UniRef50_UPI00006614B8 Cluster: Homolog of Homo sapiens "Keratin... 35 1.1
UniRef50_Q4TFG9 Cluster: Chromosome undetermined SCAF4487, whole... 35 1.1
UniRef50_Q00TF1 Cluster: Chromosome 17 contig 1, DNA sequence; n... 35 1.1
UniRef50_Q2CHG7 Cluster: Parallel beta-helix repeat protein; n=4... 34 1.4
UniRef50_Q0DW21 Cluster: Os03g0101400 protein; n=1; Oryza sativa... 34 1.4
UniRef50_Q8MS04 Cluster: RH49436p; n=9; Endopterygota|Rep: RH494... 34 1.4
UniRef50_Q0UL67 Cluster: Predicted protein; n=1; Phaeosphaeria n... 34 1.4
UniRef50_UPI000051A4EF Cluster: PREDICTED: similar to murashka C... 33 2.5
UniRef50_UPI00006A1FE8 Cluster: Coiled-coil domain-containing pr... 33 2.5
UniRef50_Q9UAY0 Cluster: Putative uncharacterized protein; n=2; ... 33 2.5
UniRef50_UPI0000E814A8 Cluster: PREDICTED: similar to MEGF6; n=1... 33 3.3
UniRef50_UPI0000D5573E Cluster: PREDICTED: similar to Tyrosine-p... 33 3.3
UniRef50_Q89Y09 Cluster: Blr0146 protein; n=1; Bradyrhizobium ja... 33 3.3
UniRef50_A5P378 Cluster: Putative uncharacterized protein; n=3; ... 33 3.3
UniRef50_A3Q6A7 Cluster: Glycine cleavage T-protein, C-terminal ... 33 3.3
UniRef50_Q93VS6 Cluster: At1g67870/T23K23_28; n=2; Arabidopsis t... 33 3.3
UniRef50_Q0J1G4 Cluster: Os09g0441900 protein; n=2; Oryza sativa... 33 3.3
UniRef50_Q01J77 Cluster: OSIGBa0152K17.10 protein; n=5; Oryza sa... 33 3.3
UniRef50_Q7REV3 Cluster: Drosophila melanogaster CG8797 gene pro... 33 3.3
UniRef50_Q4XGP3 Cluster: Pc-fam-3 protein putative; n=1; Plasmod... 33 3.3
UniRef50_UPI00005A3F07 Cluster: PREDICTED: similar to tripartite... 33 4.4
UniRef50_Q4RLL9 Cluster: Chromosome 10 SCAF15019, whole genome s... 33 4.4
UniRef50_A0VKI5 Cluster: ABC-type Fe3+ transport system periplas... 33 4.4
UniRef50_Q54XL5 Cluster: Putative uncharacterized protein; n=1; ... 33 4.4
UniRef50_Q6RVG3 Cluster: Na-driven Cl-HCO3 exchanger NDCBE1-A; n... 32 5.8
UniRef50_Q6RVG2 Cluster: Na-driven Cl-HCO3 exchanger NDCBE1-B; n... 32 5.8
UniRef50_Q73TJ6 Cluster: Putative uncharacterized protein; n=1; ... 32 5.8
UniRef50_A6WBC2 Cluster: Putative uncharacterized protein; n=1; ... 32 5.8
UniRef50_A6FUS7 Cluster: Putative uncharacterized protein; n=1; ... 32 5.8
UniRef50_A5NYF9 Cluster: 3-isopropylmalate dehydratase, small su... 32 5.8
UniRef50_A4Y015 Cluster: Sensor protein; n=5; Pseudomonas|Rep: S... 32 5.8
UniRef50_A0TYQ8 Cluster: Cobalamin (Vitamin B12) biosynthesis Cb... 32 5.8
UniRef50_A0GGU8 Cluster: Putative uncharacterized protein; n=1; ... 32 5.8
UniRef50_Q5KCD4 Cluster: Cation:cation antiporter, putative; n=2... 32 5.8
UniRef50_Q55JC6 Cluster: Putative uncharacterized protein; n=1; ... 32 5.8
UniRef50_Q2H0E5 Cluster: Profilin; n=1; Chaetomium globosum|Rep:... 32 5.8
UniRef50_UPI0000DB6DB9 Cluster: PREDICTED: hypothetical protein;... 32 7.7
UniRef50_Q90WV0 Cluster: Homeobox protein hox4x; n=3; Petromyzon... 32 7.7
UniRef50_Q9C6S3 Cluster: 30S ribosomal protein S11, putative; n=... 32 7.7
UniRef50_Q4R6C0 Cluster: Testis cDNA, clone: QtsA-18367, similar... 32 7.7
UniRef50_Q7QJD1 Cluster: ENSANGP00000019829; n=2; Culicidae|Rep:... 32 7.7
UniRef50_A7TPB7 Cluster: Putative uncharacterized protein; n=1; ... 32 7.7
UniRef50_A3H986 Cluster: Ribosomal protein S4E; n=1; Caldivirga ... 32 7.7
>UniRef50_P41042 Cluster: 40S ribosomal protein S4; n=38;
Eukaryota|Rep: 40S ribosomal protein S4 - Drosophila
melanogaster (Fruit fly)
Length = 261
Score = 144 bits (349), Expect = 9e-34
Identities = 64/82 (78%), Positives = 73/82 (89%)
Frame = +2
Query: 8 EEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFE 187
EEAKYKLCKVK+ G K VP+LVTHDGRTIRYPDPLI NDS+Q+DIA+ KI D+IKF+
Sbjct: 117 EEAKYKLCKVKKTQLGAKGVPFLVTHDGRTIRYPDPLIHANDSVQVDIASGKITDYIKFD 176
Query: 188 SGNLCMITGGRNLGRVGTIVSR 253
SGNLCMITGGRNLGRVGT+V+R
Sbjct: 177 SGNLCMITGGRNLGRVGTVVNR 198
Score = 112 bits (269), Expect = 4e-24
Identities = 53/71 (74%), Positives = 58/71 (81%)
Frame = +1
Query: 223 LGACGHHRVPRRHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPRGKGIRLTI 402
LG G RHPGSFDIVHIKDS GH FATRL NVFIIGKG K YISLP+GKG++L+I
Sbjct: 189 LGRVGTVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNKPYISLPKGKGVKLSI 248
Query: 403 AEERDKRIAAK 435
AEERDKR+AAK
Sbjct: 249 AEERDKRLAAK 259
>UniRef50_P62701 Cluster: 40S ribosomal protein S4, X isoform;
n=137; Eukaryota|Rep: 40S ribosomal protein S4, X
isoform - Homo sapiens (Human)
Length = 263
Score = 142 bits (343), Expect = 5e-33
Identities = 60/84 (71%), Positives = 73/84 (86%)
Frame = +2
Query: 2 TPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIK 181
TPEEAKYKLCKV+++ G K +P+LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFIK
Sbjct: 115 TPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIK 174
Query: 182 FESGNLCMITGGRNLGRVGTIVSR 253
F++GNLCM+TGG NLGR+G I +R
Sbjct: 175 FDTGNLCMVTGGANLGRIGVITNR 198
Score = 110 bits (265), Expect = 1e-23
Identities = 50/71 (70%), Positives = 60/71 (84%)
Frame = +1
Query: 223 LGACGHHRVPRRHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPRGKGIRLTI 402
LG G RHPGSFD+VH+KD+ G++FATRL+N+F+IGKG K +ISLPRGKGIRLTI
Sbjct: 189 LGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTI 248
Query: 403 AEERDKRIAAK 435
AEERDKR+AAK
Sbjct: 249 AEERDKRLAAK 259
>UniRef50_UPI00005A08FF Cluster: PREDICTED: similar to 40S ribosomal
protein S4, X isoform; n=3; Eutheria|Rep: PREDICTED:
similar to 40S ribosomal protein S4, X isoform - Canis
familiaris
Length = 240
Score = 135 bits (327), Expect = 4e-31
Identities = 58/88 (65%), Positives = 73/88 (82%)
Frame = +2
Query: 2 TPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIK 181
TPEEAKYKL KV+++ G K +P+LVTHD RTIRYPDPLIK+ND+IQ+D+ T KI DF K
Sbjct: 87 TPEEAKYKLGKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKMNDTIQIDLETGKITDFFK 146
Query: 182 FESGNLCMITGGRNLGRVGTIVSRGDIP 265
F++GNLCM+TGG NLGR+G I +R + P
Sbjct: 147 FDTGNLCMVTGGTNLGRIGVITNRENHP 174
Score = 88.6 bits (210), Expect = 6e-17
Identities = 39/66 (59%), Positives = 50/66 (75%)
Frame = +1
Query: 223 LGACGHHRVPRRHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPRGKGIRLTI 402
LG G HPGSFD+VH+KD+ G++FATRL+N+F+IGKG +ISLP GKGIR TI
Sbjct: 161 LGRIGVITNRENHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNIPWISLPHGKGIRFTI 220
Query: 403 AEERDK 420
AEE+ +
Sbjct: 221 AEEKKR 226
>UniRef50_UPI000065EA48 Cluster: similar to 40S ribosomal protein
S4, X isoform (LOC126235), mRNA; n=1; Takifugu
rubripes|Rep: similar to 40S ribosomal protein S4, X
isoform (LOC126235), mRNA - Takifugu rubripes
Length = 291
Score = 125 bits (302), Expect = 4e-28
Identities = 51/79 (64%), Positives = 67/79 (84%)
Frame = +2
Query: 17 KYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGN 196
+YKLCKVK++ G K +P+LVTHD RTIRYPDPLIKVND++++D+ T KI DFIKF++ N
Sbjct: 152 QYKLCKVKKILIGTKGIPHLVTHDARTIRYPDPLIKVNDTVRIDLDTGKITDFIKFDTSN 211
Query: 197 LCMITGGRNLGRVGTIVSR 253
+CM+TGG NLGR+G I +R
Sbjct: 212 MCMVTGGANLGRIGVITNR 230
Score = 113 bits (272), Expect = 2e-24
Identities = 51/71 (71%), Positives = 61/71 (85%)
Frame = +1
Query: 223 LGACGHHRVPRRHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPRGKGIRLTI 402
LG G RHPGSFD+VH+KDSTG++FATRL+N+F+IGKG K ++SLPRGKGIRLTI
Sbjct: 221 LGRIGVITNRERHPGSFDVVHVKDSTGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRLTI 280
Query: 403 AEERDKRIAAK 435
AEERDKR+AAK
Sbjct: 281 AEERDKRLAAK 291
>UniRef50_P49204 Cluster: 40S ribosomal protein S4-2; n=55;
Eukaryota|Rep: 40S ribosomal protein S4-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 262
Score = 120 bits (290), Expect = 1e-26
Identities = 53/82 (64%), Positives = 67/82 (81%)
Frame = +2
Query: 8 EEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFE 187
EEAK+KLCKV+ + G K +PYL T+DGRTIRYPDPLIK ND+I+LD+ KI++FIKF+
Sbjct: 117 EEAKFKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFD 176
Query: 188 SGNLCMITGGRNLGRVGTIVSR 253
GN+ M+TGGRN GRVG I +R
Sbjct: 177 VGNVVMVTGGRNRGRVGVIKNR 198
Score = 92.3 bits (219), Expect = 5e-18
Identities = 41/70 (58%), Positives = 54/70 (77%)
Frame = +1
Query: 226 GACGHHRVPRRHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPRGKGIRLTIA 405
G G + +H GSF+ +HI+DSTGH FATRL NV+ IGKGTK ++SLP+GKGI+LTI
Sbjct: 190 GRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKGKGIKLTII 249
Query: 406 EERDKRIAAK 435
EE KR+A++
Sbjct: 250 EEARKRLASQ 259
>UniRef50_UPI0000499069 Cluster: 40S ribosomal protein S4; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S4 - Entamoeba histolytica HM-1:IMSS
Length = 326
Score = 109 bits (263), Expect = 2e-23
Identities = 46/84 (54%), Positives = 64/84 (76%)
Frame = +2
Query: 2 TPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIK 181
T E+AK+KLCK+++ G +PY+VTHDGRTIRYP P ++ ND+I+L++ T KI+DF+K
Sbjct: 115 TAEQAKFKLCKIEKRVLGTGAIPYIVTHDGRTIRYPHPELQANDTIKLNLETGKIVDFVK 174
Query: 182 FESGNLCMITGGRNLGRVGTIVSR 253
F+ GN M+ GG +GRVG IV R
Sbjct: 175 FDIGNTAMMIGGNGMGRVGVIVKR 198
Score = 76.6 bits (180), Expect = 3e-13
Identities = 32/56 (57%), Positives = 45/56 (80%)
Frame = +1
Query: 259 HPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPRGKGIRLTIAEERDKRI 426
HPGSF+IVHIKD+ G+TF TRLNNVF+IGKGT+ ++LP KGI+ + ++ ++ I
Sbjct: 201 HPGSFEIVHIKDAKGNTFTTRLNNVFVIGKGTETLVNLPLDKGIKKPLLQQVNETI 256
>UniRef50_UPI0000D9EB72 Cluster: PREDICTED: similar to 40S ribosomal
protein S4, X isoform; n=1; Macaca mulatta|Rep:
PREDICTED: similar to 40S ribosomal protein S4, X
isoform - Macaca mulatta
Length = 244
Score = 109 bits (262), Expect = 3e-23
Identities = 47/84 (55%), Positives = 65/84 (77%)
Frame = +2
Query: 2 TPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIK 181
TPEE KYKLCK++++ K +P+LV HD T+R+PD LIKVND+IQ+D+ T KI +K
Sbjct: 125 TPEEVKYKLCKMRKIFVRAKGIPHLVIHDIHTVRHPDSLIKVNDTIQIDLETGKI-TALK 183
Query: 182 FESGNLCMITGGRNLGRVGTIVSR 253
F++GNLC++TGG N GR+G I +R
Sbjct: 184 FDTGNLCLVTGGGNWGRIGVITNR 207
Score = 42.7 bits (96), Expect = 0.004
Identities = 19/40 (47%), Positives = 27/40 (67%)
Frame = +1
Query: 256 RHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLP 375
RHP SFD H+KD+ ++F+ +F+I KG K +ISLP
Sbjct: 209 RHPVSFDTFHVKDANSNSFSI----IFVIDKGNKPWISLP 244
>UniRef50_Q9XG32 Cluster: 40S ribosomal protein S4; n=1; Guillardia
theta|Rep: 40S ribosomal protein S4 - Guillardia theta
(Cryptomonas phi)
Length = 257
Score = 109 bits (262), Expect = 3e-23
Identities = 49/95 (51%), Positives = 69/95 (72%), Gaps = 1/95 (1%)
Frame = +2
Query: 2 TPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIK 181
T +E+ +KLCKV RV+ G K +PY+VTHDGRTIR+P+ LIK NDSI LD+ K++DFIK
Sbjct: 115 TIKESMFKLCKVIRVSIGSKGIPYIVTHDGRTIRFPNLLIKSNDSIVLDLLNNKVIDFIK 174
Query: 182 FESGNLCMITGGRNLGRVGTIVSR-GDIPAPSTLC 283
F G+LC++ G N+GR+G ++ G + S +C
Sbjct: 175 FSIGSLCVVIKGSNIGRIGVFINTIGGQGSDSIVC 209
Score = 57.2 bits (132), Expect = 2e-07
Identities = 28/52 (53%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Frame = +1
Query: 265 GSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPRGKGIR-LTIAEERD 417
GS IV +KD G +F+T+ N+F+IGKGTK++ISLPR +G+R LT + E D
Sbjct: 203 GSDSIVCLKDFNGSSFSTQTKNLFVIGKGTKSFISLPRFRGLRTLTKSLEHD 254
>UniRef50_UPI00006CBCC9 Cluster: Ribosomal family S4e containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal family S4e containing protein - Tetrahymena
thermophila SB210
Length = 370
Score = 101 bits (241), Expect = 1e-20
Identities = 44/79 (55%), Positives = 56/79 (70%)
Frame = +2
Query: 8 EEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFE 187
EEAKYKL KV A GP +PY+VTHD RTIR+P+P IK+ D+++ D+ KI +F E
Sbjct: 229 EEAKYKLLKVTAKAIGPNQIPYIVTHDSRTIRFPNPEIKIGDTLKYDLVNNKIENFAHLE 288
Query: 188 SGNLCMITGGRNLGRVGTI 244
SGN+C I G N+GRVG I
Sbjct: 289 SGNVCYIQQGNNIGRVGII 307
Score = 78.6 bits (185), Expect = 7e-14
Identities = 33/69 (47%), Positives = 49/69 (71%)
Frame = +1
Query: 223 LGACGHHRVPRRHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPRGKGIRLTI 402
+G G + +H GSFDI H+KD+ G+ FATRL N+F++G+G K++I LP G G+R TI
Sbjct: 301 IGRVGIIQHIEKHQGSFDICHVKDAKGNAFATRLGNIFVLGQGKKSWIELPSGDGVRETI 360
Query: 403 AEERDKRIA 429
EER ++ +
Sbjct: 361 LEERKRKFS 369
>UniRef50_A2ECC6 Cluster: 40S ribosomal protein S4-C, putative; n=4;
Trichomonas vaginalis G3|Rep: 40S ribosomal protein
S4-C, putative - Trichomonas vaginalis G3
Length = 269
Score = 88.6 bits (210), Expect = 6e-17
Identities = 37/79 (46%), Positives = 58/79 (73%)
Frame = +2
Query: 8 EEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFE 187
+EA +KL +V + G K +P++VTHDGRTI Y DP ++V+D+++ +I T ++ IKF+
Sbjct: 131 KEASFKLLRVNQFKIGAKGIPHVVTHDGRTISYVDPSVRVHDALKFNIKTGEVESVIKFK 190
Query: 188 SGNLCMITGGRNLGRVGTI 244
G++ M+T G N+GRVGTI
Sbjct: 191 VGDVAMVTAGGNVGRVGTI 209
Score = 58.8 bits (136), Expect = 6e-08
Identities = 28/62 (45%), Positives = 40/62 (64%)
Frame = +1
Query: 223 LGACGHHRVPRRHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPRGKGIRLTI 402
+G G + + SFDIVH+KD++G FATR+ NVF+IG+ ISLP +G+R +I
Sbjct: 203 VGRVGTIQKIEKQMASFDIVHLKDTSGAVFATRIMNVFVIGENEHPLISLPAREGVRPSI 262
Query: 403 AE 408
E
Sbjct: 263 LE 264
>UniRef50_Q7KJQ3 Cluster: 40S ribosomal protein S4; n=9;
Eukaryota|Rep: 40S ribosomal protein S4 - Leishmania
major
Length = 273
Score = 75.8 bits (178), Expect = 5e-13
Identities = 36/79 (45%), Positives = 46/79 (58%)
Frame = +2
Query: 11 EAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFES 190
EA+ KL KV + T VP VTHDG IRYPDP + D+I ++ K +D IK
Sbjct: 115 EAQIKLMKVVNLYTATGRVPVAVTHDGHRIRYPDPHTSIGDTIVYNVKEKKCVDLIKNRQ 174
Query: 191 GNLCMITGGRNLGRVGTIV 247
G ++TGG N GR+G IV
Sbjct: 175 GKAVIVTGGANRGRIGEIV 193
Score = 64.5 bits (150), Expect = 1e-09
Identities = 25/59 (42%), Positives = 44/59 (74%), Gaps = 1/59 (1%)
Frame = +1
Query: 259 HPGSFDIVHIKDSTGHTFATRLNNVFIIGKG-TKAYISLPRGKGIRLTIAEERDKRIAA 432
HPG+F+I H+KD++G FATR N+F+IGK +++P+ +G+R+ + +ER++R+ A
Sbjct: 198 HPGAFNIAHLKDASGAEFATRAANIFVIGKDLNNLQVTVPKQQGLRMNVIQEREERLIA 256
>UniRef50_Q56230 Cluster: 30S ribosomal protein S4e; n=3;
Thermoplasma|Rep: 30S ribosomal protein S4e -
Thermoplasma acidophilum
Length = 235
Score = 57.2 bits (132), Expect = 2e-07
Identities = 32/81 (39%), Positives = 40/81 (49%)
Frame = +2
Query: 2 TPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIK 181
T E A KL KV+ P N L THDGRT D KV D + + KI + IK
Sbjct: 109 TKERASMKLLKVRSKVIAPGNRIQLGTHDGRTFITDDKSKKVGDVWAVSVPDMKISEIIK 168
Query: 182 FESGNLCMITGGRNLGRVGTI 244
+ GN IT G ++ + GTI
Sbjct: 169 MQPGNKAYITAGSHVNQTGTI 189
>UniRef50_Q40941 Cluster: 40S ribosomal protein S4; n=2;
Bigelowiella natans|Rep: 40S ribosomal protein S4 -
Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 242
Score = 54.0 bits (124), Expect = 2e-06
Identities = 26/78 (33%), Positives = 43/78 (55%)
Frame = +2
Query: 11 EAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFES 190
E K+CKV ++ ++T D R ++ IKV DS+ + +I+ +KFE
Sbjct: 118 EKDLKICKVIKIINASSKNKIIITDDLRELKINYAKIKVEDSLLIKTINDEIVYALKFEV 177
Query: 191 GNLCMITGGRNLGRVGTI 244
G+LC+IT G++LG + I
Sbjct: 178 GSLCLITRGKHLGTIAVI 195
>UniRef50_Q8SRB9 Cluster: 40S RIBOSOMAL PROTEIN S4; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S4 -
Encephalitozoon cuniculi
Length = 268
Score = 51.2 bits (117), Expect = 1e-05
Identities = 26/79 (32%), Positives = 47/79 (59%)
Frame = +2
Query: 8 EEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFE 187
EEA Y+L KV + + +PY+V+ G +IR+ DP I + +I++ T+K++++I
Sbjct: 117 EEASYRLTKVTKKYEN-QGIPYIVSSCGLSIRFCDPAIDLGYTIKISNETSKVIEYIVPG 175
Query: 188 SGNLCMITGGRNLGRVGTI 244
+ ++ G+ GRVG I
Sbjct: 176 PDKVIFVSRGKARGRVGVI 194
>UniRef50_A1RWS3 Cluster: Ribosomal protein S4E, central; n=1;
Thermofilum pendens Hrk 5|Rep: Ribosomal protein S4E,
central - Thermofilum pendens (strain Hrk 5)
Length = 251
Score = 46.4 bits (105), Expect = 3e-04
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
Frame = +2
Query: 5 PEEAKYKLCKVKRVATGPKNVPYLVTHDGRTI-------RYPDPL-IKVNDSIQLDIATT 160
PEEA YKL +++R T HDGR + Y + K D++ + I
Sbjct: 119 PEEAGYKLAQIRRKMTVKNGDLQFTLHDGRNVLIRKGSEAYSTAISYKTYDALLITIPRQ 178
Query: 161 KIMDFIKFESGNLCMITGGRNLGRVGTI 244
I+ + FE G L ++ GRN+G +G I
Sbjct: 179 SIVSHVPFEVGTLAIVVDGRNVGFMGRI 206
>UniRef50_Q6L1B5 Cluster: 30S ribosomal protein S4e; n=1;
Picrophilus torridus|Rep: 30S ribosomal protein S4e -
Picrophilus torridus
Length = 234
Score = 46.0 bits (104), Expect = 4e-04
Identities = 30/83 (36%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Frame = +2
Query: 5 PEEAK-YKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIK 181
P E K KL +VK + HDG T+ IK DS+ + I +I+D +K
Sbjct: 109 PGETKGLKLLRVKGKTYVKGGRIQISFHDGSTMVTDRKDIKNGDSVLVKIPKKEIVDVLK 168
Query: 182 FESGNLCMITGGRNLGRVGTIVS 250
F GN ITGG ++G + TI S
Sbjct: 169 FAPGNRVFITGGSHVGEIATIKS 191
>UniRef50_A5UL76 Cluster: Ribosomal protein S4e; n=2;
Methanobacteriaceae|Rep: Ribosomal protein S4e -
Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM
861)
Length = 242
Score = 45.6 bits (103), Expect = 6e-04
Identities = 26/101 (25%), Positives = 48/101 (47%), Gaps = 2/101 (1%)
Frame = +2
Query: 8 EEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFE 187
EE KLCK+ +T + HDG+ + + V D I L + +I + + +
Sbjct: 116 EENDSKLCKIVNKSTIKGGKIQVNLHDGKNVIIDENDYNVGDVIDLKVPDHEINEVFELK 175
Query: 188 SGNLCMITGGRNLGRVGTI--VSRGDIPAPSTLCTSRTPRD 304
G +ITGG++ G +GT+ + + P+T+ + +D
Sbjct: 176 EGACVLITGGKHTGELGTVSEIIVNESSNPNTIIIENSAKD 216
>UniRef50_Q9YF85 Cluster: 30S ribosomal protein S4e; n=4;
Desulfurococcales|Rep: 30S ribosomal protein S4e -
Aeropyrum pernix
Length = 253
Score = 44.4 bits (100), Expect = 0.001
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 8/89 (8%)
Frame = +2
Query: 8 EEAKYKLCKVKRVATGPKNVPYLVTHDGRTI--RYPDP------LIKVNDSIQLDIATTK 163
EE K +++ T L HDGR I R DP + + D++ + + +
Sbjct: 118 EEGDLKPVRIENKTTVKGGHVQLNLHDGRNILVRVKDPRNPVEDVYRTMDTLLITVPGQE 177
Query: 164 IMDFIKFESGNLCMITGGRNLGRVGTIVS 250
I IKF G + +I GGRN+GRVG + S
Sbjct: 178 IKGHIKFGEGAIAIIVGGRNVGRVGVVKS 206
>UniRef50_Q12ZT9 Cluster: Ribosomal protein S4E; n=1;
Methanococcoides burtonii DSM 6242|Rep: Ribosomal
protein S4E - Methanococcoides burtonii (strain DSM
6242)
Length = 236
Score = 43.2 bits (97), Expect = 0.003
Identities = 25/74 (33%), Positives = 39/74 (52%)
Frame = +2
Query: 23 KLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLC 202
KLC+++ + + + +DG I + DSI L + K++ IK+E GNL
Sbjct: 117 KLCRIEGKTSIKEGKIQMRLNDGVNIIGSNNY-NTKDSIILSVPDKKVVKHIKYEVGNLA 175
Query: 203 MITGGRNLGRVGTI 244
MI GG + G VG+I
Sbjct: 176 MIVGGSHAGEVGSI 189
>UniRef50_A3CT09 Cluster: Ribosomal protein S4E, central; n=3;
Methanomicrobiales|Rep: Ribosomal protein S4E, central -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 242
Score = 42.7 bits (96), Expect = 0.004
Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
Frame = +2
Query: 8 EEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATT-----KIMD 172
E AK +LCK++ T L G + D K DS+ + + T +I+D
Sbjct: 112 ESAKTRLCKIRNKTTVKGGKVQLNFAFGANV-LADNTYKAKDSVVVTLGTDGEDRFRIVD 170
Query: 173 FIKFESGNLCMITGGRNLGRVGTIV 247
+ GN+ MI GG++ G+VG IV
Sbjct: 171 HFPYAEGNVAMIVGGKHSGKVGRIV 195
>UniRef50_Q2VZ09 Cluster: Predicted SAM-dependent methyltransferase;
n=4; Rhodospirillaceae|Rep: Predicted SAM-dependent
methyltransferase - Magnetospirillum magneticum (strain
AMB-1 / ATCC 700264)
Length = 820
Score = 41.9 bits (94), Expect = 0.007
Identities = 24/55 (43%), Positives = 28/55 (50%)
Frame = +3
Query: 285 HQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAHRSQGRRAV 449
H+G TH R + RQGH+ V AA R GHP HHR G Q R G+ V
Sbjct: 24 HRGDQETHDRIGPQLVPGTRQGHQAVDHAAPR-GHPQHHREGHAQGLRPIGQSGV 77
>UniRef50_Q8PV38 Cluster: 30S ribosomal protein S4e; n=4;
Euryarchaeota|Rep: 30S ribosomal protein S4e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 235
Score = 41.1 bits (92), Expect = 0.013
Identities = 24/75 (32%), Positives = 36/75 (48%)
Frame = +2
Query: 23 KLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLC 202
KLC++ T L +DG I + DS+ L I ++ +KFE GNL
Sbjct: 116 KLCRINNKTTVKGGKIQLNLNDGTNILGSNDY-GTKDSLILSIPDKHVVKHLKFEVGNLA 174
Query: 203 MITGGRNLGRVGTIV 247
M+ GG++ G G I+
Sbjct: 175 MVIGGQHSGETGKIM 189
>UniRef50_A6WAT7 Cluster: Putative uncharacterized protein; n=1;
Kineococcus radiotolerans SRS30216|Rep: Putative
uncharacterized protein - Kineococcus radiotolerans
SRS30216
Length = 189
Score = 39.1 bits (87), Expect = 0.051
Identities = 27/75 (36%), Positives = 28/75 (37%), Gaps = 11/75 (14%)
Frame = -1
Query: 427 RCACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSW-RRCVP----------WSP*CA 281
RC P R CP R ARC CP R RC RC W P A
Sbjct: 10 RCPARCPARCPARCPARCPARCPARCPARCPARCPARCPARCPAHCPNNGAARRWRP-AA 68
Query: 280 QCRRSRDVSAGHDGA 236
RR+R G DGA
Sbjct: 69 AARRARPRRGGRDGA 83
Score = 33.5 bits (73), Expect = 2.5
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -1
Query: 424 CACPAPRRW*GGCPCRAAARCTPSCPCRL*TRC 326
C P R CP R ARC CP R RC
Sbjct: 7 CFARCPARCPARCPARCPARCPARCPARCPARC 39
>UniRef50_A6PQ76 Cluster: Putative uncharacterized protein; n=1;
Victivallis vadensis ATCC BAA-548|Rep: Putative
uncharacterized protein - Victivallis vadensis ATCC
BAA-548
Length = 762
Score = 39.1 bits (87), Expect = 0.051
Identities = 26/67 (38%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +3
Query: 273 RHCAHQGL-HGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAHRSQGRRAV 449
RH A Q H H R EQR R+G L GHP H + Q HR +G+RA
Sbjct: 125 RHRAQQPRRHHRHQRDRGEQRAAQRKGDHRRKLLEHHAGHPLHEEQ--RQEHRQRGQRAG 182
Query: 450 GLRTINF 470
G R +F
Sbjct: 183 GQRGHHF 189
>UniRef50_A7ATI1 Cluster: Putative uncharacterized protein; n=1;
Babesia bovis|Rep: Putative uncharacterized protein -
Babesia bovis
Length = 546
Score = 39.1 bits (87), Expect = 0.051
Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 3/35 (8%)
Frame = +3
Query: 318 EVEQRVHNRQ---GHEGVHLAAARQGHPPHHRRGA 413
E Q+VH R+ G E +HL + HPPHHR+GA
Sbjct: 441 EYVQKVHEREMKSGEEAIHLPNSGTHHPPHHRKGA 475
>UniRef50_UPI000038E22A Cluster: hypothetical protein Faci_03001139;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03001139 - Ferroplasma acidarmanus fer1
Length = 241
Score = 38.7 bits (86), Expect = 0.067
Identities = 23/77 (29%), Positives = 39/77 (50%)
Frame = +2
Query: 20 YKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNL 199
+K+ K + TG + + HDG+TI I +D + + I +I + +K G+
Sbjct: 121 FKVVKKTIIGTGKIQLGF---HDGKTIVTDRKDINTSDVLLMKIPDLEIENVLKIAEGDK 177
Query: 200 CMITGGRNLGRVGTIVS 250
ITGG ++G + TI S
Sbjct: 178 VFITGGSHVGELATIKS 194
>UniRef50_Q9KI91 Cluster: VrrB; n=17; Bacteria|Rep: VrrB - Bacillus
anthracis
Length = 265
Score = 37.9 bits (84), Expect = 0.12
Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 7/60 (11%)
Frame = +3
Query: 276 HCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAA-------ARQGHPPHHRRGAGQAHRSQ 434
H HQG HG H H +Q+VH+ GH +H A QGH HH Q H Q
Sbjct: 152 HHHHQGHHGHHGHH--QQQVHH-HGHHHIHPQAILYQTHQGHQGHHDHHGHHGHQGHHGQ 208
Score = 35.5 bits (78), Expect = 0.62
Identities = 18/58 (31%), Positives = 21/58 (36%)
Frame = +3
Query: 276 HCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAHRSQGRRAV 449
H HQG HG H H + GH G H GH HH H ++ V
Sbjct: 116 HHHHQGHHGHHGHHHHQ----GHHGHHGHHHHQGHHGHQGHHHHQGHHGHHGHHQQQV 169
Score = 35.5 bits (78), Expect = 0.62
Identities = 19/52 (36%), Positives = 20/52 (38%), Gaps = 2/52 (3%)
Frame = +3
Query: 276 HCAHQGLHGTHLR--HEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAH 425
H H G HG H H H+ QGH G QGH HH Q H
Sbjct: 119 HQGHHGHHGHHHHQGHHGHHGHHHHQGHHGHQGHHHHQGHHGHHGHHQQQVH 170
Score = 32.3 bits (70), Expect = 5.8
Identities = 17/60 (28%), Positives = 23/60 (38%), Gaps = 7/60 (11%)
Frame = +3
Query: 276 HCAHQGLHGTHLRHEVEQRVH-------NRQGHEGVHLAAARQGHPPHHRRGAGQAHRSQ 434
H H G H + H +H QGH+G H GH HH + + Q + Q
Sbjct: 158 HHGHHGHHQQQVHHHGHHHIHPQAILYQTHQGHQGHHDHHGHHGHQGHHGQHSQQHQQHQ 217
>UniRef50_Q673R6 Cluster: Ribosomal protein S4; n=2; environmental
samples|Rep: Ribosomal protein S4 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 232
Score = 37.9 bits (84), Expect = 0.12
Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Frame = +2
Query: 14 AKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDP-LIKVNDSIQLDIATTKIMDFIKFES 190
A KLC+V +T + HDGR I D L D++ + + + F
Sbjct: 114 AASKLCRVMGKSTITDGKTQIHLHDGRNILVSDAKLYDSGDTLVISLPDQSVAGHHPFSK 173
Query: 191 GNLCMITGGRNLGRVGTIVSR 253
G +TGG ++G +VSR
Sbjct: 174 GATAYLTGGSHIGITAKVVSR 194
>UniRef50_Q9KI83 Cluster: VrrB; n=9; Bacillus cereus group|Rep: VrrB
- Bacillus anthracis
Length = 115
Score = 37.1 bits (82), Expect = 0.20
Identities = 22/57 (38%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Frame = +3
Query: 276 HCAHQGLHGTHLRHEVEQRVHNRQGHEGVH----LAAARQGHPPHHRRGAGQAHRSQ 434
H HQG HG H H +Q+VH+ GH +H L QGH HH SQ
Sbjct: 41 HHHHQGHHGHHGHH--QQQVHH-HGHHHIHPQAILYQTHQGHQGHHDHHGHHGQHSQ 94
Score = 36.7 bits (81), Expect = 0.27
Identities = 21/50 (42%), Positives = 22/50 (44%)
Frame = +3
Query: 276 HCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAH 425
H HQG HG H H H+ QGH G H QGH HH Q H
Sbjct: 17 HQGHQGHHG-HQGH------HHHQGHHGHHGHHHHQGHHGHHGHHQQQVH 59
Score = 32.7 bits (71), Expect = 4.4
Identities = 16/54 (29%), Positives = 20/54 (37%)
Frame = +3
Query: 288 QGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAHRSQGRRAV 449
Q +HG H H Q GH+G H GH HH H ++ V
Sbjct: 6 QVIHGHHGHHH-HQGHQGHHGHQGHHHHQGHHGHHGHHHHQGHHGHHGHHQQQV 58
>UniRef50_Q0W1X6 Cluster: 30S ribosomal protein S4E; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S4E -
Uncultured methanogenic archaeon RC-I
Length = 234
Score = 37.1 bits (82), Expect = 0.20
Identities = 22/78 (28%), Positives = 36/78 (46%)
Frame = +2
Query: 11 EAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFES 190
+A K+CK+ L HDG T+ + K DS+ L + KI +
Sbjct: 113 DASAKICKIVNKTALRGGKIQLNLHDGTTMIASNDY-KTKDSVILKMPERKIDQHFTYAV 171
Query: 191 GNLCMITGGRNLGRVGTI 244
G+L M+T G++ G +G +
Sbjct: 172 GSLVMVTEGKHSGEIGKV 189
>UniRef50_P62428 Cluster: 30S ribosomal protein S4e; n=12;
Euryarchaeota|Rep: 30S ribosomal protein S4e -
Methanococcus maripaludis
Length = 244
Score = 37.1 bits (82), Expect = 0.20
Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 10/90 (11%)
Frame = +2
Query: 8 EEAKYKLCKV--KRVATGPKNVPYLVTHDGRT--------IRYPDPLIKVNDSIQLDIAT 157
++ KLCK+ K V G N+ L HDGR + + + K DS+ + I
Sbjct: 116 DKTDVKLCKIVNKTVVKGG-NIQ-LNLHDGRNQIVKVSDAAKAEEDVYKTGDSVLISIPE 173
Query: 158 TKIMDFIKFESGNLCMITGGRNLGRVGTIV 247
I + F G L ITGG+++G IV
Sbjct: 174 QSIAGHVAFGEGKLAYITGGKHVGEFAKIV 203
>UniRef50_A4M369 Cluster: Cobyrinic acid a,c-diamide synthase; n=6;
Bacteria|Rep: Cobyrinic acid a,c-diamide synthase -
Geobacter bemidjiensis Bem
Length = 311
Score = 36.3 bits (80), Expect = 0.36
Identities = 24/64 (37%), Positives = 29/64 (45%)
Frame = +3
Query: 267 LLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAHRSQGRRA 446
+ H H+ HGT HE E R H+ HE +H GHP H G A + RR
Sbjct: 1 MCEHHNHEHSHGTD--HEHEHRHHDHHHHENLH-----HGHPHHATPQGGDAAPLEARR- 52
Query: 447 VGLR 458
GLR
Sbjct: 53 -GLR 55
>UniRef50_Q17LX3 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 450
Score = 36.3 bits (80), Expect = 0.36
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = +3
Query: 285 HQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAHRSQGRRA 446
H G+ H H +Q+ H+ GH H + G PHHR S GR++
Sbjct: 287 HPGMEHHHHPHHHQQQHHSSHGHPAQHQGSG--GKQPHHRNNDSFNRNSSGRKS 338
>UniRef50_Q4QD98 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 928
Score = 35.9 bits (79), Expect = 0.47
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 9/60 (15%)
Frame = +3
Query: 309 LRHEVEQRVHNRQGHEGVHLAA--ARQGHPPHHRRGA-------GQAHRSQGRRAVGLRT 461
L H V +H+R G G H + AR PP HR+G G++ R Q RRA+ L T
Sbjct: 412 LLHRVLLELHDRNGSGGAHRQSSPARGETPPRHRQGTDAAVAAPGESERQQSRRAMRLLT 471
>UniRef50_A5KAS9 Cluster: Tryptophan-rich antigen; n=3; cellular
organisms|Rep: Tryptophan-rich antigen - Plasmodium
vivax
Length = 2662
Score = 35.9 bits (79), Expect = 0.47
Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 6/57 (10%)
Frame = +3
Query: 276 HCAHQGLHGTHLRHEVEQRVHNRQGHE-GVHLAAARQG--HPPH-HRRGA--GQAHR 428
H H G H +H ++ VH Q H+ GVH A Q HP H H+RG QAH+
Sbjct: 389 HPKHAHQKGVHPKHAHQKGVHPEQAHQRGVHPEQAHQKGVHPKHAHQRGVHPEQAHQ 445
>UniRef50_O05634 Cluster: 30S ribosomal protein S4e; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S4e -
Sulfolobus acidocaldarius
Length = 244
Score = 35.9 bits (79), Expect = 0.47
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
Frame = +2
Query: 8 EEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYP-DPLIKVN----DSIQLDIATTKIMD 172
E+AKYK ++ T V L DGR I + L + N ++++++ KI
Sbjct: 112 EDAKYKFVRIMNKTTLKSGVLQLNLEDGRNILLKGEELSQYNLPTLTTLKIELPEQKITT 171
Query: 173 FIKFESGNLCMITGGRNLGRVGTI 244
+ G MI GGRN G G I
Sbjct: 172 AYTIKEGVYAMIIGGRNAGLHGKI 195
>UniRef50_A7DDI7 Cluster: Putative uncharacterized protein; n=2;
Methylobacterium extorquens PA1|Rep: Putative
uncharacterized protein - Methylobacterium extorquens
PA1
Length = 711
Score = 35.5 bits (78), Expect = 0.62
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = +3
Query: 318 EVEQRVHNRQGHEGVHLAAARQGH--PPHH-RRGAGQAHRSQGRRAVG 452
E EQR + +GH+ R+ H P HH G G+ HR++ R AVG
Sbjct: 236 EQEQRFEHDEGHDDRRRDQRREAHDLPQHHVGHGGGEQHRARHRDAVG 283
>UniRef50_Q8BY81 Cluster: 3 days neonate thymus cDNA, RIKEN
full-length enriched library, clone:A630024D08
product:hypothetical Histidine-rich region containing
protein, full insert sequence; n=1; Mus musculus|Rep: 3
days neonate thymus cDNA, RIKEN full-length enriched
library, clone:A630024D08 product:hypothetical
Histidine-rich region containing protein, full insert
sequence - Mus musculus (Mouse)
Length = 139
Score = 35.1 bits (77), Expect = 0.82
Identities = 27/68 (39%), Positives = 32/68 (47%)
Frame = +3
Query: 249 PAETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAHR 428
PAE LLR + G H RH +R H RQ EGV R+GHP HH Q H
Sbjct: 63 PAERV-LLRGVSPPGEALGHQRHY--ERQHVRQHVEGVGQHGERRGHPAHHHL---QHHE 116
Query: 429 SQGRRAVG 452
+G +G
Sbjct: 117 HEGIMKMG 124
>UniRef50_UPI0000DB7528 Cluster: PREDICTED: similar to Homeobox
protein araucan; n=1; Apis mellifera|Rep: PREDICTED:
similar to Homeobox protein araucan - Apis mellifera
Length = 677
Score = 34.7 bits (76), Expect = 1.1
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = +3
Query: 303 THLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAHRSQ 434
TH H+ +H+ Q H G +Q H HH G H SQ
Sbjct: 429 THPHHQQYHHLHHHQQHYGQQQQQQQQQHQHHHMPSQGHHHHSQ 472
>UniRef50_UPI00006614B8 Cluster: Homolog of Homo sapiens
"Keratin-associated protein 10-4; n=1; Takifugu
rubripes|Rep: Homolog of Homo sapiens
"Keratin-associated protein 10-4 - Takifugu rubripes
Length = 353
Score = 34.7 bits (76), Expect = 1.1
Identities = 20/52 (38%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Frame = -1
Query: 424 CACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRCVP--WSP*CAQC 275
C CP R C C + RC SC C RC TS RC W P +C
Sbjct: 149 CWCPTYCRCPTSCWCPTSCRCPTSCWCPTYCRCPTSC-RCPTSCWCPTYCRC 199
Score = 34.7 bits (76), Expect = 1.1
Identities = 20/52 (38%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Frame = -1
Query: 424 CACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRCVP--WSP*CAQC 275
C CP R C C + RC SC C RC TS RC W P +C
Sbjct: 275 CWCPTYCRCPTSCWCPTSCRCPTSCWCPTYCRCPTSC-RCPTSCWCPTYCRC 325
Score = 32.3 bits (70), Expect = 5.8
Identities = 22/64 (34%), Positives = 24/64 (37%), Gaps = 2/64 (3%)
Frame = -1
Query: 451 PTARRPWLRCACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRCVP--WSP*CAQ 278
PT+ R C CP R C C + C C C RC TS RC W P
Sbjct: 164 PTSCRCPTSCWCPTYCRCPTSCRCPTSCWCPTYCRCPTYCRCPTSC-RCPTSCWCPTYCW 222
Query: 277 CRRS 266
C S
Sbjct: 223 CPTS 226
>UniRef50_Q4TFG9 Cluster: Chromosome undetermined SCAF4487, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF4487,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 258
Score = 34.7 bits (76), Expect = 1.1
Identities = 25/62 (40%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Frame = +3
Query: 273 RHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGH--PPHHRRGAGQAHRSQGRRA 446
R H G HL E R G G A RQ PPH RR AG+ RSQG R
Sbjct: 152 RRLEHGGGPRLHLE-PAESEAAARTGRGGDRRARGRQRAQLPPHTRRPAGRYRRSQGWRH 210
Query: 447 VG 452
+G
Sbjct: 211 LG 212
>UniRef50_Q00TF1 Cluster: Chromosome 17 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 17 contig 1, DNA
sequence - Ostreococcus tauri
Length = 197
Score = 34.7 bits (76), Expect = 1.1
Identities = 18/35 (51%), Positives = 23/35 (65%)
Frame = -2
Query: 372 QRDVRLRALADYEHVVQPRGEGVSRGVLDVHNVEG 268
+RD RL A D EHV + R + ++ GVL VHN EG
Sbjct: 43 KRDHRLVARTDGEHVRRARRKLLTGGVLQVHNFEG 77
>UniRef50_Q2CHG7 Cluster: Parallel beta-helix repeat protein; n=4;
cellular organisms|Rep: Parallel beta-helix repeat
protein - Oceanicola granulosus HTCC2516
Length = 3143
Score = 34.3 bits (75), Expect = 1.4
Identities = 24/60 (40%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
Frame = +3
Query: 285 HQGLHGTHLRHEVEQRVHNRQGHEGV---HLAAARQGHPPHHRR-GAGQAHRSQGRRAVG 452
HQ R V +R GH+G H+AA G P HHRR G + R+ GRR VG
Sbjct: 1828 HQPERQRARRRRVGLGARHRHGHDGAARRHVAALPPG-PRHHRRDGQPRRPRAGGRRRVG 1886
>UniRef50_Q0DW21 Cluster: Os03g0101400 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os03g0101400 protein -
Oryza sativa subsp. japonica (Rice)
Length = 361
Score = 34.3 bits (75), Expect = 1.4
Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +3
Query: 252 AETSRLLRHCAHQGLHGTHLRH-EVEQRVHNRQGHEGVHLAAARQGHPPHHRR 407
A R H HQ LH +H + Q VH+R H R+ HP HHRR
Sbjct: 120 ARQDRPHHHLRHQHLHPSHQQQPPPPQPVHHRHRHH----VRRRRAHPRHHRR 168
>UniRef50_Q8MS04 Cluster: RH49436p; n=9; Endopterygota|Rep: RH49436p
- Drosophila melanogaster (Fruit fly)
Length = 634
Score = 34.3 bits (75), Expect = 1.4
Identities = 24/97 (24%), Positives = 38/97 (39%), Gaps = 4/97 (4%)
Frame = +3
Query: 189 PGTCV*SREAVTWGVWAPSCPAETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGH-EGVH 365
P T + S + + A + A + + H A H + +Q+ H+ Q H
Sbjct: 468 PQTALHSVRYAPYSIPASAATANAALMQAHQAQSVAAAAHHHQQQQQQQHHHQQQTHNAH 527
Query: 366 LAAARQGHPPHHR---RGAGQAHRSQGRRAVGLRTIN 467
+AAA+Q HH A QAH + A+ N
Sbjct: 528 VAAAQQQQQSHHNAVSNPASQAHSAAAAAALAANAAN 564
>UniRef50_Q0UL67 Cluster: Predicted protein; n=1; Phaeosphaeria
nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
(Septoria nodorum)
Length = 648
Score = 34.3 bits (75), Expect = 1.4
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +3
Query: 312 RHEVEQRVHNRQGHEGVHLAAARQ-GHPPHHRRGAGQAHRSQGRR 443
R E E+R ++ G + +R+ GH HHR G+G+ HR RR
Sbjct: 60 RREKERRKREKRRMAGRSRSGSRERGHRRHHRGGSGERHRDGRRR 104
>UniRef50_UPI000051A4EF Cluster: PREDICTED: similar to murashka
CG9381-PA, isoform A isoform 1; n=1; Apis mellifera|Rep:
PREDICTED: similar to murashka CG9381-PA, isoform A
isoform 1 - Apis mellifera
Length = 679
Score = 33.5 bits (73), Expect = 2.5
Identities = 25/74 (33%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Frame = +3
Query: 222 TWGVWAPSCPAETSRLLRHCAHQGLHGTH-LRHEVEQRVHN-RQGHEGVHLAAARQGHPP 395
++G+ P P T H +H HG H H + HN H +H A Q H P
Sbjct: 265 SFGLSYPFVPGHTPHPPIHNSH---HGIHSSHHNIHNSHHNLHNSHHNIH--NAHQTH-P 318
Query: 396 HHRRGAGQAHRSQG 437
HH G G H +QG
Sbjct: 319 HHPPGTGH-HPAQG 331
>UniRef50_UPI00006A1FE8 Cluster: Coiled-coil domain-containing protein
35; n=1; Xenopus tropicalis|Rep: Coiled-coil
domain-containing protein 35 - Xenopus tropicalis
Length = 957
Score = 33.5 bits (73), Expect = 2.5
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +3
Query: 267 LLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRR 407
LLRHC + T L++ Q V +++ HE + Q + PHH R
Sbjct: 893 LLRHCGPEASSETELQNTGPQVVASQKTHEKLDNLPTDQANTPHHHR 939
>UniRef50_Q9UAY0 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 471
Score = 33.5 bits (73), Expect = 2.5
Identities = 19/56 (33%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
Frame = +3
Query: 276 HCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGH--PPHHRRGAGQAHRSQG 437
HC G HG H R H G G R GH PPHH G++ G
Sbjct: 361 HCP--GRHGRHGSRSHSPRGHGHGGRHGPPHCPGRHGHHGPPHHHHHDGRSPSRHG 414
Score = 29.5 bits (63), Expect(2) = 6.5
Identities = 16/43 (37%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Frame = +3
Query: 276 HC-AHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHH 401
HC G HG H + R +R GH H R PPHH
Sbjct: 389 HCPGRHGHHGPPHHHHHDGRSPSRHGHHHHHHHGCRP-FPPHH 430
Score = 21.4 bits (43), Expect(2) = 6.5
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = +3
Query: 390 PPHHRRGAGQAHRSQGRRA 446
PPH R G H G R+
Sbjct: 450 PPHRRGGHCHHHHHNGHRS 468
>UniRef50_UPI0000E814A8 Cluster: PREDICTED: similar to MEGF6; n=1;
Gallus gallus|Rep: PREDICTED: similar to MEGF6 - Gallus
gallus
Length = 1119
Score = 33.1 bits (72), Expect = 3.3
Identities = 18/41 (43%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Frame = -1
Query: 394 GGCP--CRAAARCTPSCPCRL*TRCSTSWRRCVPWSP*CAQ 278
GGC C C CR R RRC PWSP CAQ
Sbjct: 128 GGCEHDCVQLTANQHQCRCRRQYRLREDGRRCAPWSP-CAQ 167
>UniRef50_UPI0000D5573E Cluster: PREDICTED: similar to
Tyrosine-protein phosphatase non-receptor type 13
(Protein-tyrosine phosphatase 1E) (PTP-E1) (hPTPE1)
(PTP-BAS) (Protein-tyrosine phosphatase PTPL1)
(Fas-associated protein-tyrosine phosphatase 1) (FAP-1);
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
Tyrosine-protein phosphatase non-receptor type 13
(Protein-tyrosine phosphatase 1E) (PTP-E1) (hPTPE1)
(PTP-BAS) (Protein-tyrosine phosphatase PTPL1)
(Fas-associated protein-tyrosine phosphatase 1) (FAP-1)
- Tribolium castaneum
Length = 768
Score = 33.1 bits (72), Expect = 3.3
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +2
Query: 74 LVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMI 208
+ DGR ++ D +IKVND ++TT+I+D ++ G +C++
Sbjct: 708 VAARDGR-LKPGDRVIKVNDESVEHLSTTEIIDLLRIVRGPVCIV 751
>UniRef50_Q89Y09 Cluster: Blr0146 protein; n=1; Bradyrhizobium
japonicum|Rep: Blr0146 protein - Bradyrhizobium
japonicum
Length = 530
Score = 33.1 bits (72), Expect = 3.3
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Frame = +3
Query: 288 QGLHGTHLRHEVEQRVHNRQGH----EGVHLAAARQGHPPHHRRGAGQAHRSQGRRA 446
+G+HG H + RV +RQG +G+ AA RQ P H RG + R + + A
Sbjct: 371 EGVHGRHHHQRLPGRVRHRQGRPVAVQGL-CAAFRQRRLPLHLRGTAEVDRERAQCA 426
>UniRef50_A5P378 Cluster: Putative uncharacterized protein; n=3;
Proteobacteria|Rep: Putative uncharacterized protein -
Methylobacterium sp. 4-46
Length = 1338
Score = 33.1 bits (72), Expect = 3.3
Identities = 26/59 (44%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Frame = +3
Query: 276 HCAHQGLHGTHLRHEVEQRVHNRQ-GHEGVHLAAARQGH-PPHHRRGAGQAH-RSQGRR 443
H H+G G+ LR R R G EG AA R+ H PP HR GA + H R GRR
Sbjct: 960 HARHRGAGGSRLRRH---RGGGRAVGPEG---AAIRRAHRPPDHRCGAARRHERPAGRR 1012
>UniRef50_A3Q6A7 Cluster: Glycine cleavage T-protein, C-terminal
barrel; n=12; Actinomycetales|Rep: Glycine cleavage
T-protein, C-terminal barrel - Mycobacterium sp. (strain
JLS)
Length = 356
Score = 33.1 bits (72), Expect = 3.3
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +2
Query: 203 MITGGRNLGRVGTIVSR-GDIPAPSTLCTSRTPRDTPSPRG 322
++ GGR +GRVGT+V D P L P DTP G
Sbjct: 281 VLAGGRTVGRVGTVVEHIDDGPVALALVKRGLPADTPLTTG 321
>UniRef50_Q93VS6 Cluster: At1g67870/T23K23_28; n=2; Arabidopsis
thaliana|Rep: At1g67870/T23K23_28 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 279
Score = 33.1 bits (72), Expect = 3.3
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +3
Query: 285 HQGLHGTHLR--HEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAHR 428
HQG+HG + H ++ + + H+G+H + GH H+ G G H+
Sbjct: 154 HQGMHGMQHQGGHGMQHQGGHGMQHQGMHGMQHQGGHGMEHQGGHGMQHQ 203
Score = 31.9 bits (69), Expect = 7.7
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +3
Query: 285 HQGLHGT--HLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAHR 428
HQG HG H H ++ + + H+G+H + GH H+ G G H+
Sbjct: 130 HQGGHGIQHHDIHGMQHQGGHGMQHQGMHGMQHQGGHGMQHQGGHGMQHQ 179
>UniRef50_Q0J1G4 Cluster: Os09g0441900 protein; n=2; Oryza sativa
(japonica cultivar-group)|Rep: Os09g0441900 protein -
Oryza sativa subsp. japonica (Rice)
Length = 444
Score = 33.1 bits (72), Expect = 3.3
Identities = 15/53 (28%), Positives = 21/53 (39%)
Frame = -1
Query: 424 CACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRCVPWSP*CAQCRRS 266
C+CP C A C+ C C T+C + C P C +C+ S
Sbjct: 337 CSCPRCSSCFNIFKCSCAGCCSSLCKCPCTTQCFSCQSSCCKRQPSCCKCQSS 389
>UniRef50_Q01J77 Cluster: OSIGBa0152K17.10 protein; n=5; Oryza
sativa|Rep: OSIGBa0152K17.10 protein - Oryza sativa
(Rice)
Length = 444
Score = 33.1 bits (72), Expect = 3.3
Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +3
Query: 258 TSRL--LR-HCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAG 416
TSRL LR H H HG + RH++ +R R H L A G P + AG
Sbjct: 25 TSRLKGLRVHLTHVDAHGNYSRHQLLRRAARRSHHRMSRLVARATGVPMTSSKAAG 80
>UniRef50_Q7REV3 Cluster: Drosophila melanogaster CG8797 gene
product-related; n=8; Eukaryota|Rep: Drosophila
melanogaster CG8797 gene product-related - Plasmodium
yoelii yoelii
Length = 2198
Score = 33.1 bits (72), Expect = 3.3
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +3
Query: 288 QGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAHRSQGRR 443
QG G H++H+ E ++QGH +QG ++G GQ + QG++
Sbjct: 1207 QGQQGAHVQHQQEAHRQHQQGHGQQQGQGQQQGQ--GQQQGQGQGQQGQGQQ 1256
>UniRef50_Q4XGP3 Cluster: Pc-fam-3 protein putative; n=1; Plasmodium
chabaudi|Rep: Pc-fam-3 protein putative - Plasmodium
chabaudi
Length = 160
Score = 33.1 bits (72), Expect = 3.3
Identities = 17/52 (32%), Positives = 20/52 (38%), Gaps = 2/52 (3%)
Frame = +3
Query: 276 HCAHQGLHGTHLRHEVEQRVHNRQGHE--GVHLAAARQGHPPHHRRGAGQAH 425
H H G H HL H + H+ + HE G H H HH G H
Sbjct: 97 HHEHHGHHEHHLHHAHGEHHHHGEHHEHHGHHEHHLHHAHGEHHHHGEHHHH 148
>UniRef50_UPI00005A3F07 Cluster: PREDICTED: similar to tripartite
motif protein 39; n=2; Canis lupus familiaris|Rep:
PREDICTED: similar to tripartite motif protein 39 -
Canis familiaris
Length = 612
Score = 32.7 bits (71), Expect = 4.4
Identities = 13/49 (26%), Positives = 22/49 (44%)
Frame = +3
Query: 246 CPAETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHP 392
CP E + L HC+H H TH + + + +G + + R +P
Sbjct: 298 CPIEKNLLCGHCSHSPGHATHRHSPISKATKHYRGFINLRMIMIRAEYP 346
>UniRef50_Q4RLL9 Cluster: Chromosome 10 SCAF15019, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 10
SCAF15019, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 242
Score = 32.7 bits (71), Expect = 4.4
Identities = 19/44 (43%), Positives = 19/44 (43%)
Frame = -1
Query: 382 CRAAARCTPSCPCRL*TRCSTSWRRCVPWSP*CAQCRRSRDVSA 251
CR RC PS RC SWR C S A R SR SA
Sbjct: 121 CRLLVRCAPSSSWSTCARCRRSWRGCT--SAWTATWRSSRRTSA 162
>UniRef50_A0VKI5 Cluster: ABC-type Fe3+ transport system periplasmic
component-like; n=1; Delftia acidovorans SPH-1|Rep:
ABC-type Fe3+ transport system periplasmic
component-like - Delftia acidovorans SPH-1
Length = 674
Score = 32.7 bits (71), Expect = 4.4
Identities = 24/57 (42%), Positives = 25/57 (43%)
Frame = -1
Query: 442 RRPWLRCACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRCVPWSP*CAQCR 272
RR W PAP R C RAAARC C R RC S R +P CA R
Sbjct: 12 RRKWAMWPMPAPAR----C-ARAAARCWAWCCPRSPIRCLPSACRALPRRRRCAAMR 63
>UniRef50_Q54XL5 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 196
Score = 32.7 bits (71), Expect = 4.4
Identities = 17/56 (30%), Positives = 22/56 (39%)
Frame = +3
Query: 273 RHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAHRSQGR 440
+H +H HG H E + H+ GH H GH H G H +GR
Sbjct: 76 KHESHH-FHGLHFHPEHQFGGHHFGGHHHHHGGHHHHGHHHGHHHGGHHGHHFEGR 130
>UniRef50_Q6RVG3 Cluster: Na-driven Cl-HCO3 exchanger NDCBE1-A; n=2;
Rattus norvegicus|Rep: Na-driven Cl-HCO3 exchanger
NDCBE1-A - Rattus norvegicus (Rat)
Length = 1037
Score = 32.3 bits (70), Expect = 5.8
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +3
Query: 306 HLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAHRSQGRRAVG 452
++ +E E+ +R + GV + RQ H H R GQ HR +G R G
Sbjct: 33 NIHYEKEELEGHRTLYVGVRMPLGRQSH--RHHRTHGQKHRRRGGRGKG 79
>UniRef50_Q6RVG2 Cluster: Na-driven Cl-HCO3 exchanger NDCBE1-B; n=2;
Rattus norvegicus|Rep: Na-driven Cl-HCO3 exchanger
NDCBE1-B - Rattus norvegicus (Rat)
Length = 1067
Score = 32.3 bits (70), Expect = 5.8
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +3
Query: 306 HLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAHRSQGRRAVG 452
++ +E E+ +R + GV + RQ H H R GQ HR +G R G
Sbjct: 33 NIHYEKEELEGHRTLYVGVRMPLGRQSH--RHHRTHGQKHRRRGGRGKG 79
>UniRef50_Q73TJ6 Cluster: Putative uncharacterized protein; n=1;
Mycobacterium avium subsp. paratuberculosis|Rep:
Putative uncharacterized protein - Mycobacterium
paratuberculosis
Length = 381
Score = 32.3 bits (70), Expect = 5.8
Identities = 28/74 (37%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Frame = +3
Query: 240 PSCPAETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGV---HLAAARQGHPPHHRRG 410
P+ A R L H RH QR H R+ H GV H AR P H+ G
Sbjct: 184 PAGGAGGPRRLGQHRHARQRARPKRH-ARQRGHERRRHAGVRGDHHGPARD--PRRHQAG 240
Query: 411 AGQAHRSQGRRAVG 452
AG R + RRAVG
Sbjct: 241 AGSPSR-RARRAVG 253
>UniRef50_A6WBC2 Cluster: Putative uncharacterized protein; n=1;
Kineococcus radiotolerans SRS30216|Rep: Putative
uncharacterized protein - Kineococcus radiotolerans
SRS30216
Length = 189
Score = 32.3 bits (70), Expect = 5.8
Identities = 25/78 (32%), Positives = 31/78 (39%)
Frame = -1
Query: 421 ACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRCVPWSP*CAQCRRSRDVSAGHD 242
AC R GG P R R PSCP + R + W+P AQC + S +
Sbjct: 17 ACTGARTGGGGAPGRTRPR--PSCPPSPGDQPQLG--RPLTWAP-PAQCSEATSRSRRRE 71
Query: 241 GAHTPQVTASRDHTQVPG 188
G H P V + Q G
Sbjct: 72 GRHRPAVLPTSVEVQAAG 89
>UniRef50_A6FUS7 Cluster: Putative uncharacterized protein; n=1;
Roseobacter sp. AzwK-3b|Rep: Putative uncharacterized
protein - Roseobacter sp. AzwK-3b
Length = 39
Score = 32.3 bits (70), Expect = 5.8
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +3
Query: 318 EVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAG 416
E+EQR+ + Q + G+HLAA HHRR AG
Sbjct: 8 EIEQRIESLQ-NSGMHLAAKALMRELHHRRKAG 39
>UniRef50_A5NYF9 Cluster: 3-isopropylmalate dehydratase, small
subunit; n=2; Alphaproteobacteria|Rep: 3-isopropylmalate
dehydratase, small subunit - Methylobacterium sp. 4-46
Length = 543
Score = 32.3 bits (70), Expect = 5.8
Identities = 22/55 (40%), Positives = 25/55 (45%)
Frame = +3
Query: 276 HCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAHRSQGR 440
H +GL G LR + R R GH G LAA Q HRR A + QGR
Sbjct: 6 HLDPRGLRGARLRDRGD-RGRARAGHPGA-LAAPAQDPARDHRRDARRPRHRQGR 58
>UniRef50_A4Y015 Cluster: Sensor protein; n=5; Pseudomonas|Rep:
Sensor protein - Pseudomonas mendocina ymp
Length = 783
Score = 32.3 bits (70), Expect = 5.8
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = -1
Query: 142 LDGIVDFDKWVWIADGAAIMRYQVRNILRSGRHTLDFTQLVLSLLR 5
L+ I+ F + + + G + QVR+ILR+GRH L VL + R
Sbjct: 420 LNSILGFAQLLEMDRGTPAQQAQVRHILRAGRHLLGLINEVLDIAR 465
>UniRef50_A0TYQ8 Cluster: Cobalamin (Vitamin B12) biosynthesis CbiG
protein precursor; n=10; Burkholderia cepacia
complex|Rep: Cobalamin (Vitamin B12) biosynthesis CbiG
protein precursor - Burkholderia cenocepacia MC0-3
Length = 1277
Score = 32.3 bits (70), Expect = 5.8
Identities = 29/105 (27%), Positives = 42/105 (40%), Gaps = 5/105 (4%)
Frame = +3
Query: 159 RRLWTSSSLSPGTCV*SREAVTWGVWAPSCPAETSRLLRHCAHQGLHGTHLRHEVEQRVH 338
RR+ P CV +E + G W P R + +H +R E+R+
Sbjct: 512 RRVVAGRRAQP-VCVVQQE-LRAGRWRPDRHHARRARQRQRSRPAIHAP-IRDRREKRLA 568
Query: 339 NRQGHEGVHLAAARQGHPPHHRRGAG---QAH--RSQGRRAVGLR 458
R+ +AR PPH R G+ + H R+Q RR G R
Sbjct: 569 RRRAEHDARAVSARPVQPPHRRPGSPGLFRPHRPRAQSRRGTGRR 613
>UniRef50_A0GGU8 Cluster: Putative uncharacterized protein; n=1;
Burkholderia phytofirmans PsJN|Rep: Putative
uncharacterized protein - Burkholderia phytofirmans PsJN
Length = 753
Score = 32.3 bits (70), Expect = 5.8
Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = +3
Query: 276 HCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAAR-QGHPPHHRRGAGQAHRSQGRR 443
H H H RH ++R+H+R H G H R +GH H RR G RR
Sbjct: 533 HDRHHRDRHRHDRHRHDRRLHDRHRH-GHHRHGHRLRGHRHHDRRPRGHGLHRHDRR 588
>UniRef50_Q5KCD4 Cluster: Cation:cation antiporter, putative; n=2;
Filobasidiella neoformans|Rep: Cation:cation antiporter,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 765
Score = 32.3 bits (70), Expect = 5.8
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 5/68 (7%)
Frame = +3
Query: 276 HCAHQG-LHG-THLRHEV--EQRVHN-RQGHEGVHLAAARQGHPPHHRRGAGQAHRSQGR 440
HC+H G H +H H++ E HN HE + A GH H RG AH S
Sbjct: 526 HCSHDGEKHSHSHNHHKLTHESSTHNDAHAHEDDYDHAHAHGHGHDHDRGHDHAH-SHNM 584
Query: 441 RAVGLRTI 464
R V L +
Sbjct: 585 RGVFLHVL 592
>UniRef50_Q55JC6 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 839
Score = 32.3 bits (70), Expect = 5.8
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 5/68 (7%)
Frame = +3
Query: 276 HCAHQG-LHG-THLRHEV--EQRVHN-RQGHEGVHLAAARQGHPPHHRRGAGQAHRSQGR 440
HC+H G H +H H++ E HN HE + A GH H RG AH S
Sbjct: 600 HCSHDGEKHSHSHNHHKLTLESSTHNDAHAHEDDYDHAHAHGHGHDHDRGHDHAH-SHNM 658
Query: 441 RAVGLRTI 464
R V L +
Sbjct: 659 RGVFLHVL 666
>UniRef50_Q2H0E5 Cluster: Profilin; n=1; Chaetomium globosum|Rep:
Profilin - Chaetomium globosum (Soil fungus)
Length = 135
Score = 32.3 bits (70), Expect = 5.8
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +3
Query: 186 SPGTCV*SREAVTWGVWAPSCPAETSRLLRHCAHQGLHGTHLRHEV----EQRVHNRQGH 353
SPG + E T A+++ +L H +G++ +R+ V EQ ++ R+G
Sbjct: 34 SPGFAISPDELKTISQIIKELGADSTPMLDHARAEGIYVAGVRYVVAGGAEQGIYARKGK 93
Query: 354 EGVHLAAARQ 383
EGV++A + Q
Sbjct: 94 EGVYIAKSNQ 103
>UniRef50_UPI0000DB6DB9 Cluster: PREDICTED: hypothetical protein;
n=1; Apis mellifera|Rep: PREDICTED: hypothetical protein
- Apis mellifera
Length = 444
Score = 31.9 bits (69), Expect = 7.7
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = +3
Query: 276 HCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAHR 428
H AH H H +H E + H+ Q H H + GH H G + H+
Sbjct: 207 HHAHHQDH--HHKHGHEHKHHHHQDHRHKHGHEHKHGHHEEHHHGHHEDHK 255
>UniRef50_Q90WV0 Cluster: Homeobox protein hox4x; n=3;
Petromyzontidae|Rep: Homeobox protein hox4x - Petromyzon
marinus (Sea lamprey)
Length = 381
Score = 31.9 bits (69), Expect = 7.7
Identities = 20/74 (27%), Positives = 27/74 (36%)
Frame = +3
Query: 207 SREAVTWGVWAPSCPAETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQG 386
S E + AP A RH Q H + + Q+ H+ Q H H +
Sbjct: 60 SEELCSANATAPPLTAPLKAGARHLNRQNHHHQQQQEQHHQQQHHHQNHNH-HHGHHQDH 118
Query: 387 HPPHHRRGAGQAHR 428
H HH + AHR
Sbjct: 119 HQGHHHQRQHDAHR 132
>UniRef50_Q9C6S3 Cluster: 30S ribosomal protein S11, putative; n=2;
Arabidopsis thaliana|Rep: 30S ribosomal protein S11,
putative - Arabidopsis thaliana (Mouse-ear cress)
Length = 235
Score = 31.9 bits (69), Expect = 7.7
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +1
Query: 187 VRELVYDHGRP*LGACGHHRVPRRHPGSFDIVHIKDSTGHTFAT 318
VRE++ D GR G H + P + DI+HIK +TF T
Sbjct: 87 VREVIEDEGRRTAGIFSHFQRPNLETNA-DIIHIKMLRNNTFVT 129
>UniRef50_Q4R6C0 Cluster: Testis cDNA, clone: QtsA-18367, similar to
human phosphatidylinositol 4-kinase type-II beta
(PI4K2B),mRNA, RefSeq: NM_018323.2; n=1; Macaca
fascicularis|Rep: Testis cDNA, clone: QtsA-18367,
similar to human phosphatidylinositol 4-kinase type-II
beta (PI4K2B),mRNA, RefSeq: NM_018323.2 - Macaca
fascicularis (Crab eating macaque) (Cynomolgus monkey)
Length = 169
Score = 31.9 bits (69), Expect = 7.7
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -1
Query: 418 CPAPRRW*GGCPCRAAARCTP 356
CP PR GGC CR A C P
Sbjct: 95 CPTPRAPPGGCACRPALSCLP 115
>UniRef50_Q7QJD1 Cluster: ENSANGP00000019829; n=2; Culicidae|Rep:
ENSANGP00000019829 - Anopheles gambiae str. PEST
Length = 766
Score = 31.9 bits (69), Expect = 7.7
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 7/50 (14%)
Frame = +3
Query: 240 PSCPAETSRLLRHCA----HQGL---HGTHLRHEVEQRVHNRQGHEGVHL 368
P P+ T L HC H G+ H T + +E H+ Q H G+HL
Sbjct: 397 PFQPSSTPNSLEHCYLVYNHVGIVRRHATDKENSIEVEFHDSQQHHGIHL 446
>UniRef50_A7TPB7 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 228
Score = 31.9 bits (69), Expect = 7.7
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Frame = +3
Query: 249 PAETSRLLRHCAHQGLHGTH-LRHEVEQRVH-NRQGHEGVHLAAARQGHPPHHRR 407
P + + L H HQ LH TH L H + Q + Q H +H PHH R
Sbjct: 100 PPQVTVQLHHHIHQHLHHTHQLHHHIHQLLQVIVQHHHPIHQHHHHTHQHPHHIR 154
>UniRef50_A3H986 Cluster: Ribosomal protein S4E; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein S4E -
Caldivirga maquilingensis IC-167
Length = 237
Score = 31.9 bits (69), Expect = 7.7
Identities = 20/83 (24%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
Frame = +2
Query: 11 EAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDP---LIKVNDSIQLDIATTKIMDFIK 181
EA K+C+++ L HDGR I + S+ +++ K+MD+
Sbjct: 113 EAGVKVCRIEDKTMVKAGKIQLNLHDGRNIIVDQDEGRKYETLGSVVVNLEDGKLMDYYP 172
Query: 182 FESGNLCMITGGRNLGRVGTIVS 250
+ + G N+GR GT+++
Sbjct: 173 MQPNQYVIAFNGVNVGRHGTLIN 195
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 543,660,656
Number of Sequences: 1657284
Number of extensions: 12394857
Number of successful extensions: 44406
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 41343
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44184
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 27290400475
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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