Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30620
(481 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024780-6|AAF60569.1| 259|Caenorhabditis elegans Ribosomal pro... 112 1e-25
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 37 0.007
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 33 0.081
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 29 1.3
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 29 1.3
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 29 1.3
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 29 1.3
Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical pr... 28 3.1
Z69302-8|CAA93261.3| 420|Caenorhabditis elegans Hypothetical pr... 28 3.1
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 28 3.1
U23523-6|AAC46561.1| 86|Caenorhabditis elegans Hypothetical pr... 28 4.0
Z69885-4|CAA93757.1| 208|Caenorhabditis elegans Hypothetical pr... 27 5.3
U23523-9|AAC46564.1| 147|Caenorhabditis elegans Hypothetical pr... 27 5.3
AF209707-1|AAF28335.1| 522|Caenorhabditis elegans phosphoinosit... 27 5.3
AC006708-6|AAF60427.2| 522|Caenorhabditis elegans Phosphoinosit... 27 5.3
AL132902-4|CAC14420.1| 1913|Caenorhabditis elegans Hypothetical ... 27 7.0
AC006834-7|AAF40003.2| 176|Caenorhabditis elegans Lipid deplete... 27 7.0
Z81528-5|CAB04287.1| 698|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z79756-5|CAB02115.1| 388|Caenorhabditis elegans Hypothetical pr... 27 9.3
U97549-9|AAB52849.2| 472|Caenorhabditis elegans Hypothetical pr... 27 9.3
>AC024780-6|AAF60569.1| 259|Caenorhabditis elegans Ribosomal
protein, small subunitprotein 4 protein.
Length = 259
Score = 112 bits (270), Expect = 1e-25
Identities = 54/90 (60%), Positives = 64/90 (71%)
Frame = +2
Query: 11 EAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFES 190
EA +KLCKVK V T K VP L T DGRTIRYPDP +KVND+I +I+T KI D +KFE
Sbjct: 117 EADFKLCKVKSVRTVNKGVPVLTTTDGRTIRYPDPHVKVNDTIVFNISTQKITDSVKFEP 176
Query: 191 GNLCMITGGRNLGRVGTIVSRGDIPAPSTL 280
GNL +TGGRN+GRVG I R +P S +
Sbjct: 177 GNLAYVTGGRNVGRVGIIGHRERLPGASDI 206
Score = 98.3 bits (234), Expect = 3e-21
Identities = 46/71 (64%), Positives = 56/71 (78%)
Frame = +1
Query: 223 LGACGHHRVPRRHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPRGKGIRLTI 402
+G GH R PG+ DI+HIKDS GH+FATR++NVF+IGKG KA +SLP G GIRL+I
Sbjct: 191 VGIIGHRE---RLPGASDIIHIKDSAGHSFATRISNVFVIGKGNKALVSLPTGAGIRLSI 247
Query: 403 AEERDKRIAAK 435
AEERDKR+A K
Sbjct: 248 AEERDKRMAQK 258
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 37.1 bits (82), Expect = 0.007
Identities = 18/43 (41%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Frame = +3
Query: 276 HCAHQGLHGTHLRHEVEQRVHNRQGHEGV-HLAAARQGHPPHH 401
H H G HGTH H GH G H A A GH HH
Sbjct: 538 HHGHHGEHGTHHGHHGSHHSPAHHGHHGEHHHAPAHHGHHGHH 580
Score = 35.9 bits (79), Expect = 0.015
Identities = 20/58 (34%), Positives = 21/58 (36%), Gaps = 1/58 (1%)
Frame = +3
Query: 276 HCAHQGLHGTHLRHEVEQRVHNRQGHEGV-HLAAARQGHPPHHRRGAGQAHRSQGRRA 446
H H G HGTH H GH G H A A GH H G H + A
Sbjct: 480 HHGHHGEHGTHHGHHGSHHSPAHHGHHGEHHHAPAHHGH--HGEHGTHHGHHGEHHHA 535
Score = 35.1 bits (77), Expect = 0.027
Identities = 18/51 (35%), Positives = 19/51 (37%), Gaps = 1/51 (1%)
Frame = +3
Query: 276 HCAHQGLHGTHLRHEVEQR-VHNRQGHEGVHLAAARQGHPPHHRRGAGQAH 425
H AH HG H RH E H+ H G H H HH A H
Sbjct: 392 HAAHHDEHGVHHRHHGEHHGTHHSPAHHGEH-GTHHGHHGEHHHAPAHHGH 441
Score = 33.9 bits (74), Expect = 0.061
Identities = 18/57 (31%), Positives = 19/57 (33%)
Frame = +3
Query: 276 HCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAHRSQGRRA 446
H H G HG H H GH G H A H HH A H + A
Sbjct: 422 HGTHHGHHGEHHHAPAHHGHHESHGH-GHHSPAHHGHHGEHHHAPAHHGHHGEHHHA 477
Score = 31.9 bits (69), Expect = 0.25
Identities = 20/64 (31%), Positives = 21/64 (32%), Gaps = 5/64 (7%)
Frame = +3
Query: 249 PAETSRLLRHCAHQGLHGTHLRHEVEQRVH----NRQGHEGVHLAAARQG-HPPHHRRGA 413
PA H H G HG H H GH G H + A G H HH A
Sbjct: 513 PAHHGHHGEHGTHHGHHGEHHHAPAHHGHHGEHGTHHGHHGSHHSPAHHGHHGEHHHAPA 572
Query: 414 GQAH 425
H
Sbjct: 573 HHGH 576
Score = 31.5 bits (68), Expect = 0.33
Identities = 18/56 (32%), Positives = 20/56 (35%), Gaps = 5/56 (8%)
Frame = +3
Query: 282 AHQGLHGTHLRHEVEQRVHNRQG----HEGVHLAAARQG-HPPHHRRGAGQAHRSQ 434
AH G HG H H G H G H + A G H HH A H +
Sbjct: 466 AHHGHHGEHHHAPAHHGHHGEHGTHHGHHGSHHSPAHHGHHGEHHHAPAHHGHHGE 521
Score = 30.7 bits (66), Expect = 0.57
Identities = 15/52 (28%), Positives = 17/52 (32%)
Frame = +3
Query: 276 HCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAHRS 431
H H HG H H H G G H H P H G+ H +
Sbjct: 519 HGEHGTHHGHHGEHHHAPAHHGHHGEHGTHHGHHGSHHSPAHHGHHGEHHHA 570
Score = 30.7 bits (66), Expect = 0.57
Identities = 19/58 (32%), Positives = 21/58 (36%), Gaps = 4/58 (6%)
Frame = +3
Query: 276 HCAHQGLHGT----HLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAHRSQG 437
H H G HG+ H HE H+ H G H H HH G G H G
Sbjct: 573 HHGHHGHHGSHGVHHGHHESHGHGHHAPAHHGHH--GEHGVHHGHHGAGYGAHHGHHG 628
Score = 30.7 bits (66), Expect = 0.57
Identities = 21/62 (33%), Positives = 22/62 (35%), Gaps = 6/62 (9%)
Frame = +3
Query: 258 TSRLLRHCAHQGLHGTH--LRHEVEQRVHNRQGHE-GVHLAAARQGHPP---HHRRGAGQ 419
T L H H G HGTH H H+ HE G H A H HH G
Sbjct: 660 THHSLAHHGHHGGHGTHHGAHHSPAHHGHHGAHHEHGAHHGAHHGHHDDKENHHHHGHHS 719
Query: 420 AH 425
H
Sbjct: 720 KH 721
Score = 30.3 bits (65), Expect = 0.76
Identities = 18/59 (30%), Positives = 20/59 (33%), Gaps = 4/59 (6%)
Frame = +3
Query: 282 AHQGLHGTHLRHEVEQRVHN----RQGHEGVHLAAARQGHPPHHRRGAGQAHRSQGRRA 446
AH G HG H H H+ GH G H GH H A H + A
Sbjct: 514 AHHGHHGEHGTHHGHHGEHHHAPAHHGHHGEH--GTHHGHHGSHHSPAHHGHHGEHHHA 570
Score = 30.3 bits (65), Expect = 0.76
Identities = 17/50 (34%), Positives = 17/50 (34%), Gaps = 2/50 (4%)
Frame = +3
Query: 282 AHQGLHGTHLRHEVEQRVHNRQG--HEGVHLAAARQGHPPHHRRGAGQAH 425
AH G HG H H H G H G H GH H A H
Sbjct: 622 AHHGHHGAHHHHAPHHEHHEHHGDHHHGSH--GVHHGHHGTHHSLAHHGH 669
Score = 30.3 bits (65), Expect = 0.76
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = +3
Query: 285 HQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAHRSQG 437
H G HG H H GH G H H P H G AH G
Sbjct: 647 HHGSHGVHHGHHGTHHSLAHHGHHGGHGTHHGAHHSPAH-HGHHGAHHEHG 696
Score = 29.1 bits (62), Expect = 1.7
Identities = 15/51 (29%), Positives = 17/51 (33%)
Frame = +3
Query: 282 AHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAHRSQ 434
AH G HG H H G GVH + H H A H +
Sbjct: 559 AHHGHHGEHHHAPAHHGHHGHHGSHGVH-HGHHESHGHGHHAPAHHGHHGE 608
Score = 29.1 bits (62), Expect = 1.7
Identities = 16/51 (31%), Positives = 18/51 (35%), Gaps = 1/51 (1%)
Frame = +3
Query: 276 HCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHH-RRGAGQAH 425
H H G H +H H G GVH G+ HH GA H
Sbjct: 583 HGVHHGHHESHGHGHHAPAHHGHHGEHGVHHGHHGAGYGAHHGHHGAHHHH 633
Score = 28.7 bits (61), Expect = 2.3
Identities = 18/50 (36%), Positives = 20/50 (40%), Gaps = 4/50 (8%)
Frame = +3
Query: 276 HCAHQGLHGTHLRHE--VEQRVHNRQG-HEGVHLAAARQG-HPPHHRRGA 413
H +H HG H H H G H G H + A G H HH GA
Sbjct: 648 HGSHGVHHGHHGTHHSLAHHGHHGGHGTHHGAHHSPAHHGHHGAHHEHGA 697
Score = 27.9 bits (59), Expect = 4.0
Identities = 12/39 (30%), Positives = 15/39 (38%)
Frame = +3
Query: 249 PAETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVH 365
PA H H HG H H ++ H+ GH H
Sbjct: 683 PAHHGHHGAHHEHGAHHGAHHGHHDDKENHHHHGHHSKH 721
Score = 27.5 bits (58), Expect = 5.3
Identities = 19/67 (28%), Positives = 22/67 (32%), Gaps = 5/67 (7%)
Frame = +3
Query: 249 PAETSRLLRHCAHQGLHGTH---LRHEVEQRVHNRQGHEGVH-LAAARQG-HPPHHRRGA 413
PA H H G HG+H H H+ H G H G H HH A
Sbjct: 478 PAHHGHHGEHGTHHGHHGSHHSPAHHGHHGEHHHAPAHHGHHGEHGTHHGHHGEHHHAPA 537
Query: 414 GQAHRSQ 434
H +
Sbjct: 538 HHGHHGE 544
Score = 27.1 bits (57), Expect = 7.0
Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 9/63 (14%)
Frame = +3
Query: 264 RLLRHCAHQGLHGT-HLRHEVE-QRVHNRQGHEG-------VHLAAARQGHPPHHRRGAG 416
+L R A LH HL E+ Q+V + H+G + + GH HH GA
Sbjct: 30 KLTRDEARSALHDIEHLAKELHFQKVFDHHAHDGHISLKGFLSFISPHHGHHTHHAHGAH 89
Query: 417 QAH 425
H
Sbjct: 90 PGH 92
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 33.5 bits (73), Expect = 0.081
Identities = 19/56 (33%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
Frame = +3
Query: 276 HCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGH--PPHHRRGAGQAHRSQG 437
HC G HG H R H G G R GH PPHH G++ G
Sbjct: 361 HCP--GRHGRHGSRSHSPRGHGHGGRHGPPHCPGRHGHHGPPHHHHHDGRSPSRHG 414
Score = 29.5 bits (63), Expect(2) = 0.21
Identities = 16/43 (37%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Frame = +3
Query: 276 HC-AHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHH 401
HC G HG H + R +R GH H R PPHH
Sbjct: 389 HCPGRHGHHGPPHHHHHDGRSPSRHGHHHHHHHGCRP-FPPHH 430
Score = 28.3 bits (60), Expect = 3.1
Identities = 17/51 (33%), Positives = 18/51 (35%), Gaps = 1/51 (1%)
Frame = +3
Query: 291 GLHGTHLRH-EVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAHRSQGR 440
G HG H RH R GH G +R G P G H GR
Sbjct: 283 GRHGGHGRHGSCSGSPRGRHGHGGHGGHGSRSGSPGGRHGHGGSGHHRGGR 333
Score = 21.4 bits (43), Expect(2) = 0.21
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = +3
Query: 390 PPHHRRGAGQAHRSQGRRA 446
PPH R G H G R+
Sbjct: 450 PPHRRGGHCHHHHHNGHRS 468
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 29.5 bits (63), Expect = 1.3
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = -1
Query: 424 CACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRC 305
C C PR C CR C +C C TRC T R C
Sbjct: 86 CCCCRPRCC---CCCRRCCTCCRTCCC---TRCCTCCRPC 119
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 29.5 bits (63), Expect = 1.3
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = -1
Query: 424 CACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRC 305
C C PR C CR C +C C TRC T R C
Sbjct: 84 CCCCRPRCC---CCCRRCCTCCRTCCC---TRCCTCCRPC 117
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 29.5 bits (63), Expect = 1.3
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = -1
Query: 424 CACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRC 305
C C PR C CR C +C C TRC T R C
Sbjct: 85 CCCCRPRCC---CCCRRCCTCCRTCCC---TRCCTCCRPC 118
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 29.5 bits (63), Expect = 1.3
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = -1
Query: 424 CACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRC 305
C C PR C CR C +C C TRC T R C
Sbjct: 86 CCCCRPRCC---CCCRRCCTCCRTCCC---TRCCTCCRPC 119
>Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical
protein M02G9.1 protein.
Length = 909
Score = 28.3 bits (60), Expect = 3.1
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = -1
Query: 388 CPCRAAARCTPSCP-CRL*TRCS-TSWRRCVP 299
C C+ A C P CP + + CS T R C+P
Sbjct: 54 CSCQQAPICQPQCPRAEINSDCSATCVRACIP 85
>Z69302-8|CAA93261.3| 420|Caenorhabditis elegans Hypothetical
protein F40F8.5 protein.
Length = 420
Score = 28.3 bits (60), Expect = 3.1
Identities = 16/64 (25%), Positives = 25/64 (39%), Gaps = 1/64 (1%)
Frame = +3
Query: 261 SRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQG-HPPHHRRGAGQAHRSQG 437
+R RH H+G HG ++H H H R G H P+ H +
Sbjct: 84 ARRRRHHNHEGHHGNDMKHRENMDRKKHGTHVDHHGRVRRNGDHDPNDPNVDHTGHNHRV 143
Query: 438 RRAV 449
+R++
Sbjct: 144 KRSI 147
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 28.3 bits (60), Expect = 3.1
Identities = 15/40 (37%), Positives = 17/40 (42%)
Frame = -1
Query: 424 CACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRC 305
C C P+ C CR C +C C TRC T R C
Sbjct: 85 CCCCRPKCC---CCCRRCCTCCRTCCC---TRCCTCCRPC 118
>U23523-6|AAC46561.1| 86|Caenorhabditis elegans Hypothetical
protein F53A9.6 protein.
Length = 86
Score = 27.9 bits (59), Expect = 4.0
Identities = 15/58 (25%), Positives = 20/58 (34%)
Frame = +3
Query: 237 APSCPAETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRG 410
AP T + H G TH H+ + GH G H + + H H G
Sbjct: 27 APGYMPPTVHVHTDGGHHGHMDTHHHHDSHHHGGHHGGHHGGHYESHYESHHHHGHHG 84
>Z69885-4|CAA93757.1| 208|Caenorhabditis elegans Hypothetical
protein T04C10.4 protein.
Length = 208
Score = 27.5 bits (58), Expect = 5.3
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +1
Query: 94 HHPLSRPTYQSQRFHPVRHCNYEDYGLH 177
HH PTY F+P H +Y+ + L+
Sbjct: 32 HHHHQSPTYPQSYFNPYSHQSYQQHHLN 59
>U23523-9|AAC46564.1| 147|Caenorhabditis elegans Hypothetical
protein F53A9.9 protein.
Length = 147
Score = 27.5 bits (58), Expect = 5.3
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +3
Query: 333 VHNRQGHEGVHLAAARQGHPPHHRRGAGQAHR 428
VH+ H+G H R+ H HH G H+
Sbjct: 115 VHDDHHHDGHHKKHGRKEHDHHHGHHHGHHHK 146
>AF209707-1|AAF28335.1| 522|Caenorhabditis elegans phosphoinositide
3-kinase adaptersubunit protein.
Length = 522
Score = 27.5 bits (58), Expect = 5.3
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -3
Query: 383 LPRGSEMYAFVPLPIMNTLFNLVAKVCPVESLMCTMSKE 267
L G+EM P + L ++ K P + LMC SKE
Sbjct: 300 LDAGAEMINSEPTKVTQLLVDMELKWTPAQYLMCGTSKE 338
>AC006708-6|AAF60427.2| 522|Caenorhabditis elegans Phosphoinositide
kinase adaptersubunit protein 1 protein.
Length = 522
Score = 27.5 bits (58), Expect = 5.3
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -3
Query: 383 LPRGSEMYAFVPLPIMNTLFNLVAKVCPVESLMCTMSKE 267
L G+EM P + L ++ K P + LMC SKE
Sbjct: 300 LDAGAEMINSEPTKVTQLLVDMELKWTPAQYLMCGTSKE 338
>AL132902-4|CAC14420.1| 1913|Caenorhabditis elegans Hypothetical
protein Y71A12B.4 protein.
Length = 1913
Score = 27.1 bits (57), Expect = 7.0
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +3
Query: 261 SRLLRHCA--HQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGH 389
S LL CA H G+ L+H V + G +HLAA GH
Sbjct: 842 SPLLEACARGHSGVANILLKHHARIDVFDEMGRTALHLAAF-NGH 885
>AC006834-7|AAF40003.2| 176|Caenorhabditis elegans Lipid depleted
protein 5 protein.
Length = 176
Score = 27.1 bits (57), Expect = 7.0
Identities = 11/43 (25%), Positives = 23/43 (53%)
Frame = +2
Query: 44 VATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMD 172
++TG N+P +HD + + D L K + + +++ + MD
Sbjct: 20 LSTGKDNLPVTRSHDAKKVELNDILDKPSQKTPVKVSSDETMD 62
>Z81528-5|CAB04287.1| 698|Caenorhabditis elegans Hypothetical
protein F35E2.6 protein.
Length = 698
Score = 26.6 bits (56), Expect = 9.3
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +3
Query: 240 PSCPAETSRLLRHCAHQGLHGT 305
P C ET L C+HQGL+ T
Sbjct: 445 PYCKYETQGPLAWCSHQGLNAT 466
>Z79756-5|CAB02115.1| 388|Caenorhabditis elegans Hypothetical
protein F53C11.8 protein.
Length = 388
Score = 26.6 bits (56), Expect = 9.3
Identities = 7/25 (28%), Positives = 14/25 (56%)
Frame = -3
Query: 293 SLMCTMSKEPGCLRGTRWCPHAPSY 219
+++C + G + G W PH+P +
Sbjct: 303 NILCRLRNHTGPVNGIAWAPHSPHH 327
>U97549-9|AAB52849.2| 472|Caenorhabditis elegans Hypothetical
protein F15A8.7 protein.
Length = 472
Score = 26.6 bits (56), Expect = 9.3
Identities = 13/45 (28%), Positives = 15/45 (33%)
Frame = +3
Query: 291 GLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAH 425
G H H E HN H +H + G P R A H
Sbjct: 422 GSHEAHAHSATEHGAHNHSEHHQLHRSIFHHGAPTSIRSQAQVPH 466
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,131,152
Number of Sequences: 27780
Number of extensions: 281536
Number of successful extensions: 1017
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 856
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 993
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 882200194
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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