BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS30620 (481 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 25 0.42 AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 24 0.74 AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 23 1.3 AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 23 1.7 AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 23 2.2 AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 22 3.9 AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 22 3.9 AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 22 3.9 DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 21 9.1 DQ384991-1|ABD51779.1| 94|Apis mellifera allergen Api m 6 vari... 21 9.1 DQ384990-1|ABD51778.1| 92|Apis mellifera allergen Api m 6 vari... 21 9.1 AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 21 9.1 >AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic acetylcholine receptoralpha7-1 protein. Length = 555 Score = 25.0 bits (52), Expect = 0.42 Identities = 17/57 (29%), Positives = 22/57 (38%), Gaps = 4/57 (7%) Frame = +3 Query: 243 SCPAETSRLLRHCAHQGLHGT-HLRHEVEQRVHNRQGHEGVHL---AAARQGHPPHH 401 S P + H H +H T H H H++ H AA + GH PHH Sbjct: 410 STPGPHHHTMGH-GHSHIHATPHHHHSHAATPHHQHSTPLAHSSYPAAIQIGHTPHH 465 >AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. Length = 1946 Score = 24.2 bits (50), Expect = 0.74 Identities = 11/44 (25%), Positives = 16/44 (36%) Frame = +3 Query: 285 HQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAG 416 H G G + H H+R G + + R P G+G Sbjct: 1755 HSGTMGPPVGHPTNASAHSRSGSQSMPRQNGRYSRVPSQGGGSG 1798 >AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. Length = 1598 Score = 23.4 bits (48), Expect = 1.3 Identities = 13/45 (28%), Positives = 21/45 (46%) Frame = +3 Query: 309 LRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAHRSQGRR 443 ++ E QR H+ Q H + A Q H +++ Q R Q R+ Sbjct: 133 IKQETLQRHHHLQNHHHHLQSTAVQDHHRPYQQQQQQQQRQQQRQ 177 Score = 20.6 bits (41), Expect = 9.1 Identities = 10/36 (27%), Positives = 16/36 (44%) Frame = +3 Query: 312 RHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQ 419 + + +Q+ H + EGV A + RGA Q Sbjct: 1226 QQQQQQQQHQAREREGVGAGIAETSAGTSNSRGAAQ 1261 >AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex determiner protein. Length = 408 Score = 23.0 bits (47), Expect = 1.7 Identities = 9/20 (45%), Positives = 12/20 (60%) Frame = +2 Query: 257 DIPAPSTLCTSRTPRDTPSP 316 D+P ST T+ RDT +P Sbjct: 138 DLPGKSTTTTAEVKRDTINP 157 >AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor protein. Length = 1370 Score = 22.6 bits (46), Expect = 2.2 Identities = 16/50 (32%), Positives = 23/50 (46%) Frame = +2 Query: 107 PDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTIVSRG 256 PD L + LD+ +I +F NL +TG R +G +SRG Sbjct: 447 PDALRDLALLKTLDLGENRISNFYNGSFRNLDQLTGLRLIGNDIGNLSRG 496 >AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex determiner protein. Length = 408 Score = 21.8 bits (44), Expect = 3.9 Identities = 9/20 (45%), Positives = 11/20 (55%) Frame = +2 Query: 257 DIPAPSTLCTSRTPRDTPSP 316 D+P ST T RDT +P Sbjct: 138 DLPGKSTTTTVEVKRDTINP 157 >AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice variant B protein. Length = 810 Score = 21.8 bits (44), Expect = 3.9 Identities = 11/38 (28%), Positives = 16/38 (42%) Frame = +1 Query: 265 GSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPR 378 G F VH+ T F T + + + + YI L R Sbjct: 271 GDFQPVHVHKQTAIAFRTPTYRMQQVEQPVQVYIQLKR 308 >AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. Length = 602 Score = 21.8 bits (44), Expect = 3.9 Identities = 11/38 (28%), Positives = 16/38 (42%) Frame = +1 Query: 265 GSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPR 378 G F VH+ T F T + + + + YI L R Sbjct: 271 GDFQPVHVHKQTAIAFRTPTYRMQQVEQPVQVYIQLKR 308 >DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride channel protein. Length = 428 Score = 20.6 bits (41), Expect = 9.1 Identities = 11/38 (28%), Positives = 15/38 (39%) Frame = -2 Query: 249 DTMVPTRPKLRPPVIIHKFPDSNLMKSIIFVVAMSNWM 136 D+ P +P PP PDS + I + N M Sbjct: 334 DSDTPPKPAPPPPPPSSSGPDSAKLDKIFDIATKENAM 371 >DQ384991-1|ABD51779.1| 94|Apis mellifera allergen Api m 6 variant 2 precursor protein. Length = 94 Score = 20.6 bits (41), Expect = 9.1 Identities = 6/9 (66%), Positives = 6/9 (66%) Frame = -1 Query: 364 CTPSCPCRL 338 C P C CRL Sbjct: 67 CAPGCVCRL 75 >DQ384990-1|ABD51778.1| 92|Apis mellifera allergen Api m 6 variant 1 precursor protein. Length = 92 Score = 20.6 bits (41), Expect = 9.1 Identities = 6/9 (66%), Positives = 6/9 (66%) Frame = -1 Query: 364 CTPSCPCRL 338 C P C CRL Sbjct: 67 CAPGCVCRL 75 >AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein 75 protein. Length = 900 Score = 20.6 bits (41), Expect = 9.1 Identities = 8/20 (40%), Positives = 11/20 (55%) Frame = +2 Query: 263 PAPSTLCTSRTPRDTPSPRG 322 P+P+ C S T SP+G Sbjct: 745 PSPAEQCASTTTITARSPQG 764 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 148,042 Number of Sequences: 438 Number of extensions: 3590 Number of successful extensions: 13 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 12 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 13 length of database: 146,343 effective HSP length: 53 effective length of database: 123,129 effective search space used: 13051674 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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