Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30618
(741 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 23 2.0
EF592539-1|ABQ95985.1| 630|Tribolium castaneum beta-N-acetylglu... 23 3.4
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 23 3.4
AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory recept... 23 3.4
EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock prote... 21 7.9
DQ414247-1|ABD63009.2| 414|Tribolium castaneum paired protein. 21 7.9
DQ211693-1|ABB16909.1| 314|Tribolium castaneum dorsocross protein. 21 7.9
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 7.9
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 7.9
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 7.9
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 7.9
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
protein.
Length = 2700
Score = 23.4 bits (48), Expect = 2.0
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +1
Query: 397 LEKTLCKHS*LPFSTLDPVKIRL 465
+++ LC H F++LDP K+ L
Sbjct: 661 IDQRLCTHVVYAFASLDPEKLLL 683
>EF592539-1|ABQ95985.1| 630|Tribolium castaneum
beta-N-acetylglucosaminidase FDL protein.
Length = 630
Score = 22.6 bits (46), Expect = 3.4
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = +3
Query: 183 LQDYISRLKRSTQKYLPQFSWQVCNKR 263
L Y R + + PQ++WQ N+R
Sbjct: 38 LYTYRQPYPRQKKSHPPQWTWQCINQR 64
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 22.6 bits (46), Expect = 3.4
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +1
Query: 652 PSKRRTSWSVLLN 690
PSK R W+VLLN
Sbjct: 1118 PSKIRICWNVLLN 1130
>AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory receptor
candidate 40 protein.
Length = 373
Score = 22.6 bits (46), Expect = 3.4
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 103 EHFLKIKLFRARWSWLTNVPKSSEYGLCRTTF 198
EHF K K F ++++ P + +GLC TTF
Sbjct: 180 EHFFK-KQFHYIFTYM---PYNIVFGLCLTTF 207
>EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock protein
90 protein.
Length = 721
Score = 21.4 bits (43), Expect = 7.9
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +3
Query: 180 SLQDYISRLKRSTQKYL 230
SL+DY+SR+K QK++
Sbjct: 465 SLKDYVSRIK-PNQKHI 480
>DQ414247-1|ABD63009.2| 414|Tribolium castaneum paired protein.
Length = 414
Score = 21.4 bits (43), Expect = 7.9
Identities = 12/43 (27%), Positives = 20/43 (46%)
Frame = +1
Query: 418 HS*LPFSTLDPVKIRLGSGRAGTVRRQAVDVHPCAESTKHSGF 546
HS P S L P+ ++G + D + A +T+H G+
Sbjct: 350 HSIYPSSNLMPLNNIQNLSQSGINYKDTNDNNVSAVTTQHQGY 392
>DQ211693-1|ABB16909.1| 314|Tribolium castaneum dorsocross protein.
Length = 314
Score = 21.4 bits (43), Expect = 7.9
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = +1
Query: 469 SGRAGTVRRQAVDVHPCAESTKHS 540
+G++ R+Q V HP + ++K S
Sbjct: 203 NGKSSAKRKQLVSEHPDSPNSKKS 226
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.4 bits (43), Expect = 7.9
Identities = 8/25 (32%), Positives = 12/25 (48%)
Frame = +2
Query: 215 YAKIFTSIQLAGMQQAFPVKPSAPI 289
+ K I + G AFPV + P+
Sbjct: 394 FGKFACKIMIQGFSYAFPVNLTIPV 418
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.4 bits (43), Expect = 7.9
Identities = 8/25 (32%), Positives = 12/25 (48%)
Frame = +2
Query: 215 YAKIFTSIQLAGMQQAFPVKPSAPI 289
+ K I + G AFPV + P+
Sbjct: 394 FGKFACKIMIQGFSYAFPVNLTIPV 418
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 21.4 bits (43), Expect = 7.9
Identities = 8/25 (32%), Positives = 12/25 (48%)
Frame = +2
Query: 215 YAKIFTSIQLAGMQQAFPVKPSAPI 289
+ K I + G AFPV + P+
Sbjct: 394 FGKFACKIMIQGFSYAFPVNLTIPV 418
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 21.4 bits (43), Expect = 7.9
Identities = 8/25 (32%), Positives = 12/25 (48%)
Frame = +2
Query: 215 YAKIFTSIQLAGMQQAFPVKPSAPI 289
+ K I + G AFPV + P+
Sbjct: 394 FGKFACKIMIQGFSYAFPVNLTIPV 418
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,958
Number of Sequences: 336
Number of extensions: 4510
Number of successful extensions: 16
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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