Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30618
         (741 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68751-1|CAA92971.1|  210|Caenorhabditis elegans Hypothetical pr...   197   8e-51
U00034-4|AAA50642.1|  554|Caenorhabditis elegans Hypothetical pr...    29   4.6  
Z98877-5|CAD56616.1|  731|Caenorhabditis elegans Hypothetical pr...    28   8.0  
Z49069-2|CAA88865.1|  333|Caenorhabditis elegans Hypothetical pr...    28   8.0  
U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical pr...    28   8.0  
U41014-1|AAK32947.3|  641|Caenorhabditis elegans Hypothetical pr...    28   8.0  

>Z68751-1|CAA92971.1|  210|Caenorhabditis elegans Hypothetical
           protein T05E11.1 protein.
          Length = 210

 Score =  197 bits (480), Expect = 8e-51
 Identities = 106/173 (61%), Positives = 120/173 (69%)
 Frame = +3

Query: 180 SLQDYISRLKRSTQKYLPQFSWQVCNKRFP*SPVPQSWSALQTL**CHGRDNGKKLMAVR 359
           SL DYI  +K  + KYLP  + +   +RF  +  P       +L   HGR+NGKKLM VR
Sbjct: 40  SLVDYIP-VKEKSAKYLPHSAGRFQVRRFRKAACPIVERLANSLM-MHGRNNGKKLMTVR 97

Query: 360 IVKHAFEIIHLLTGENPLQALVTAIFNSGPREDXXXXXXXXXXXXXXXXXXXXXXVNQAF 539
           IVKHAFEII+LLTGENP+Q LV A+ NSGPRED                      VNQA 
Sbjct: 98  IVKHAFEIIYLLTGENPVQVLVNAVINSGPREDSTRIGRAGTVRRQAVDVAPLRRVNQAI 157

Query: 540 WLLCTGAREAAFRNIKTIAECVADELINAAKGSSDSYAIKKKDELERVAKSNR 698
           WLLCTGAREAAFRN+KTIAEC+ADELINAAKGSS+SYAIKKKDELERVAKSNR
Sbjct: 158 WLLCTGAREAAFRNVKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 210


>U00034-4|AAA50642.1|  554|Caenorhabditis elegans Hypothetical
           protein C06E8.5 protein.
          Length = 554

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
 Frame = -3

Query: 409 GFSPVNK*IISNACLTIRTAIS-FLPLSRPWHH*RV--CKALHDWGTGLYGKRLLHTCQL 239
           G  P+    I N    ++  +S F+P S  +H  R+       DW T  +G  +  TC L
Sbjct: 319 GAGPIFLPRIPNPSQMLQIVVSDFVPNSLMFHGHRIKLFDTRIDWMTPQFGPVMRTTCDL 378

Query: 238 N*GKYFCV 215
           + G  FC+
Sbjct: 379 STGSLFCI 386


>Z98877-5|CAD56616.1|  731|Caenorhabditis elegans Hypothetical
           protein Y69H2.3c protein.
          Length = 731

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 23/66 (34%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
 Frame = -2

Query: 629 SCIN*FICNTLCDCFNISECSLTCTCAQKPECLVDSAQG---*TSTA*RRTVPARPD-PS 462
           SC   F+ N    C N +EC  T +  + P  LVD   G     ST     VP   D PS
Sbjct: 200 SCKKGFLRNRQGQCVNPTECPATGSTDENPCNLVDCRTGHQCSMSTGKPTCVPDYSDTPS 259

Query: 461 RIFTGS 444
            +F G+
Sbjct: 260 PLFPGN 265


>Z49069-2|CAA88865.1|  333|Caenorhabditis elegans Hypothetical
           protein K12D12.3 protein.
          Length = 333

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 15/30 (50%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
 Frame = -2

Query: 110 KCSAGFLG-KRQGVSPQPKGCPGLRAKVGH 24
           KC AG  G K    SP P G PG+  K GH
Sbjct: 125 KCHAGPPGPKGSPGSPGPNGVPGVDGKPGH 154


>U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical
           protein F45E4.4 protein.
          Length = 2361

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = -2

Query: 482 PARPDPSRIFTGSRVENGSYECLQRVFSS*QVNNFKRMFD 363
           P  P  ++  TGSR  +GS    Q  FS+  ++ FK  FD
Sbjct: 216 PTPPHSAKTDTGSRHSSGSSAHSQFGFSTPSISGFKIFFD 255


>U41014-1|AAK32947.3|  641|Caenorhabditis elegans Hypothetical
           protein C06G1.4 protein.
          Length = 641

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = +1

Query: 28  PTLARRPGQPLGWGETPCLLPKKPAEHFLKIKLFRARWSWLT 153
           P  A+RP    GWGE P   P  P++    I     RW+ LT
Sbjct: 425 PVPAKRPIVVTGWGELPENDPNNPSKSESTIFDENNRWNDLT 466


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,559,846
Number of Sequences: 27780
Number of extensions: 419601
Number of successful extensions: 1035
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 965
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1031
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)