Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30615
(840 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC320.03 |||transcription factor |Schizosaccharomyces pombe|ch... 33 0.067
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 32 0.088
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 30 0.36
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 30 0.47
SPAC14C4.06c |||poly|Schizosaccharomyces pombe|chr 1|||Manual 30 0.47
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 30 0.47
SPBC4F6.06 |kin1||microtubule affinity-regulating kinase Kin1 |S... 29 0.62
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 29 0.82
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 28 1.4
SPAC1556.03 |azr1||serine/threonine protein phosphatase Azr1|Sch... 28 1.4
SPAP32A8.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces... 28 1.9
SPBP23A10.14c |ell1||RNA polymerase II transcription elongation ... 28 1.9
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 27 2.5
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 27 2.5
SPCPJ732.01 |vps5||retromer complex subunit Vps5|Schizosaccharom... 27 3.3
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 27 3.3
SPBC18E5.11c |edc3|SPBC23G7.01c|enhancer of mRNA decapping Edc3 ... 27 3.3
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 27 3.3
SPBC1A4.03c |top2|ptr11|DNA topoisomerase II|Schizosaccharomyces... 27 4.4
SPAC4D7.10c |||SAGA complex subunit Spt20 |Schizosaccharomyces p... 27 4.4
SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1 |Schizo... 27 4.4
SPAC17G8.14c |pck1|SPAC22H10.01c|protein kinase C |Schizosacchar... 27 4.4
SPCC1281.06c |||acyl-coA desaturase |Schizosaccharomyces pombe|c... 26 5.8
SPAC8C9.04 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 26 5.8
SPAC328.04 |||AAA family ATPase, unknown biological role|Schizos... 26 5.8
SPCC1827.03c |||acetyl-CoA ligase |Schizosaccharomyces pombe|chr... 26 5.8
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 26 5.8
SPAC15E1.04 |||thymidylate synthase |Schizosaccharomyces pombe|c... 26 7.6
SPCC736.11 |ago1|csp9|argonaute|Schizosaccharomyces pombe|chr 3|... 26 7.6
SPAP27G11.15 |slx1||structure-specific endonuclease catalytic su... 26 7.6
SPBC21C3.01c |vps13a|vps1301, SPBC31F10.18c|chorein homolog|Schi... 26 7.6
>SPCC320.03 |||transcription factor |Schizosaccharomyces pombe|chr
3|||Manual
Length = 867
Score = 32.7 bits (71), Expect = 0.067
Identities = 31/103 (30%), Positives = 42/103 (40%), Gaps = 10/103 (9%)
Frame = +2
Query: 167 ATTKLCPDGLVFDPTIRKINKCDQPFNVDSAIGLNSSPPSLTHNVPAAMDSLPI------ 328
+ T P L D I + K D ++ NS P L ++P+ M P
Sbjct: 181 SVTLTAPAPLGVDQKISQDQKPDSWLTYNAQFAQNS--PQLAPSIPSPMKLSPANQQAMP 238
Query: 329 PTPLC----AISSTTASKVKPPRSSVRPVFISTSTPVPASGPI 445
P P +ISS T S + P P F S+ +P P SGPI
Sbjct: 239 PYPQMLGPGSISSYTNSNLGPSAGFRPPTFFSSPSPQPYSGPI 281
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 32.3 bits (70), Expect = 0.088
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +2
Query: 275 SPPSLTHNVPAAMDSLPIPTPLCAISSTTASKVKPPR--SSVRPVFISTSTPVPASGPIP 448
+PP+ +P A+ ++P+P+ + +++ S V P SS P S+ VP+ P P
Sbjct: 1477 APPAPVSQLPPAVPNVPVPSMIPSVAQQPPSSVAPATAPSSTLPPSQSSFAHVPS--PAP 1534
Query: 449 PGRQ 460
P Q
Sbjct: 1535 PAPQ 1538
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 30.3 bits (65), Expect = 0.36
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Frame = +2
Query: 302 PAAMDSLPIPTPLCAISSTTAS---KVKPPRSSV-RPVFISTSTPVPASGPIP 448
PAA S+P P P+ I S+ S K PP + + +PV S + P+ P+P
Sbjct: 963 PAAPPSIPPPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVP 1015
Score = 28.3 bits (60), Expect = 1.4
Identities = 29/116 (25%), Positives = 44/116 (37%)
Frame = +2
Query: 164 VATTKLCPDGLVFDPTIRKINKCDQPFNVDSAIGLNSSPPSLTHNVPAAMDSLPIPTPLC 343
V+T+ P V P + K++ P + SA +PP VP+ +PIPT
Sbjct: 1000 VSTSPAAPLARV--PPVPKLSSKAPPVPLPSA----DAPPI---PVPSTAPPVPIPTSTP 1050
Query: 344 AISSTTASKVKPPRSSVRPVFISTSTPVPASGPIPPGRQGCNEQQKKTKDGFRVPK 511
+ +++ P P S P P+ P P G K + VPK
Sbjct: 1051 PVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPK 1106
Score = 28.3 bits (60), Expect = 1.4
Identities = 24/89 (26%), Positives = 31/89 (34%)
Frame = +2
Query: 185 PDGLVFDPTIRKINKCDQPFNVDSAIGLNSSPPSLTHNVPAAMDSLPIPTPLCAISSTTA 364
P V P + K + P S P VP + P+P P A A
Sbjct: 1095 PKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPA 1154
Query: 365 SKVKPPRSSVRPVFISTSTPVPASGPIPP 451
PP +P + P P+SG IPP
Sbjct: 1155 PSGAPP--VPKPSVAAPPVPAPSSG-IPP 1180
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 29.9 bits (64), Expect = 0.47
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = +2
Query: 218 KINKCDQPFNVDSAIGLNSSPPSLTHNVPAAMDSLPIPTPLCAISSTTASKVKPPRSS 391
K N P N + ++ SS S T+N P D+ P+ + T++ KP SS
Sbjct: 77 KYNSSKSPVNKEGSVEKKSSEKSSTNNKPWRGDNTSKPSANSSAERTSSQHQKPETSS 134
>SPAC14C4.06c |||poly|Schizosaccharomyces pombe|chr 1|||Manual
Length = 307
Score = 29.9 bits (64), Expect = 0.47
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +1
Query: 211 YQEDQQMRPALQRRLGDRTELQPPKPNSQCPRRNGFFAHPDPS 339
+ + + PA +R L E+ K +C R N FAHP P+
Sbjct: 161 FNYSKSVMPAAKRALTQTQEVPLCKYADKCSRANCIFAHPTPA 203
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 29.9 bits (64), Expect = 0.47
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Frame = +2
Query: 275 SPPSLTHNVPAAMDSLPIPTPLCAISSTTASKVKPPRSSVRPVF---ISTSTPVPASGPI 445
+PPSL P+A SLP P A+ PP + + P + + P+P + P
Sbjct: 419 TPPSLP---PSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPA 475
Query: 446 PP 451
PP
Sbjct: 476 PP 477
Score = 27.1 bits (57), Expect = 3.3
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Frame = +2
Query: 278 PPSL-THNVPAAMDSL--PIPTPLCAISSTTASKVKPPRSSVRPVFISTSTPVPASGPIP 448
PPS+ + P + SL P P P+ S+ T S PP S RP+ + P S P
Sbjct: 233 PPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSS--PPNSPPRPIAPVSMNPAINSTSKP 290
Query: 449 P 451
P
Sbjct: 291 P 291
>SPBC4F6.06 |kin1||microtubule affinity-regulating kinase Kin1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 891
Score = 29.5 bits (63), Expect = 0.62
Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 3/82 (3%)
Frame = +2
Query: 272 SSPPSLTHNVPAAMDSLPIPTPLCAISSTTASKVKPPRSSVRPVFISTSTPVPASGPI-- 445
S P+ HN+ A P + S+ S V+P S P +IS S+ P GP+
Sbjct: 28 SDSPNRHHNLVDAFMQSP------SYSTQPKSAVEPLGLSFSPGYISPSSQSPHHGPVRS 81
Query: 446 PPGRQGCNEQQKKTKD-GFRVP 508
P R+ +T+D RVP
Sbjct: 82 PSSRKPLPASPSRTRDHSLRVP 103
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 29.1 bits (62), Expect = 0.82
Identities = 25/98 (25%), Positives = 39/98 (39%), Gaps = 5/98 (5%)
Frame = +2
Query: 269 NSSPPSLTHNVPAAMDSLPIPTPLCAISSTTA-----SKVKPPRSSVRPVFISTSTPVPA 433
+ +PP + P A + P+ +P A S +A KV PP S PV ++S P
Sbjct: 162 SKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAPVANTSSRPSSF 221
Query: 434 SGPIPPGRQGCNEQQKKTKDGFRVPKRAAG*CPKDRFV 547
+ P +E K G +P + P +V
Sbjct: 222 APPAGHAPNVTSESPKFPNRGPSIPSASVPPVPPSSYV 259
Score = 28.7 bits (61), Expect = 1.1
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Frame = +2
Query: 281 PSLTH----NVPAAMDSLPIP-TPLCAISSTTASKVKPPRSSVRPVFISTSTPVPASGPI 445
P L H + AA S P P TP + T++ PPR S+ P +++ P+P+ P
Sbjct: 110 PKLRHIGKSSASAAPPSAPAPPTPQSELRPPTSA---PPRPSIPPPSPASAPPIPSKAPP 166
Query: 446 PP 451
P
Sbjct: 167 IP 168
Score = 27.1 bits (57), Expect = 3.3
Identities = 20/58 (34%), Positives = 26/58 (44%)
Frame = +2
Query: 278 PPSLTHNVPAAMDSLPIPTPLCAISSTTASKVKPPRSSVRPVFISTSTPVPASGPIPP 451
PPS P + PIP+ L + A+ VK P S+ P S P+P P PP
Sbjct: 151 PPSPASAPPIPSKAPPIPSSL-PPPAQPAAPVKSPPSA--PSLPSAVPPMPPKVPPPP 205
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 28.3 bits (60), Expect = 1.4
Identities = 21/74 (28%), Positives = 29/74 (39%), Gaps = 4/74 (5%)
Frame = +2
Query: 278 PPSLTHNVPAAMDSLPIPTP----LCAISSTTASKVKPPRSSVRPVFISTSTPVPASGPI 445
PP+ T P D LP P P ST S++ P +V + + P P + P
Sbjct: 224 PPTYT---PKQADPLPAPPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATPS 280
Query: 446 PPGRQGCNEQQKKT 487
P R N + T
Sbjct: 281 QPPRPPTNASTRST 294
>SPAC1556.03 |azr1||serine/threonine protein phosphatase
Azr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 288
Score = 28.3 bits (60), Expect = 1.4
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -2
Query: 578 VGGWGNLGLSERICPWGI 525
VGGW N+G+ I WG+
Sbjct: 71 VGGWANVGIDPSIFSWGL 88
>SPAP32A8.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 513
Score = 27.9 bits (59), Expect = 1.9
Identities = 30/118 (25%), Positives = 39/118 (33%)
Frame = +2
Query: 239 PFNVDSAIGLNSSPPSLTHNVPAAMDSLPIPTPLCAISSTTASKVKPPRSSVRPVFISTS 418
PF G P S N M + TPL S AS + + P+F S+S
Sbjct: 181 PFASAQTQGQEHRPSS--PNPAEHMTGAYVNTPLNQPPSYAASTQPEFQQTTSPIFSSSS 238
Query: 419 TPVPASGPIPPGRQGCNEQQKKTKDGFRVPKRAAG*CPKDRFVRLTPSSPNPQRTCNG 592
TP P P P Q + F P ++ S+ NPQ G
Sbjct: 239 TP-PPPPPRPSQPTSGESQNTNPRFPFSAQSFVFSVGPNGALHQVNTSTENPQNAQAG 295
>SPBP23A10.14c |ell1||RNA polymerase II transcription elongation
factor SpELL|Schizosaccharomyces pombe|chr 2|||Manual
Length = 533
Score = 27.9 bits (59), Expect = 1.9
Identities = 29/92 (31%), Positives = 35/92 (38%), Gaps = 5/92 (5%)
Frame = +2
Query: 254 SAIGLNSSPPSLTHNVPAAMDSLPIPTPLCAISSTTASKVKPP---RSSVRPVFISTSTP 424
S G SS SL+ IP+P SSTT S + P R S P STP
Sbjct: 370 SRTGSESSAVSLSDTTNLNTPISDIPSPG---SSTTCSNLSSPHIKRKSRSPPQSLPSTP 426
Query: 425 VPASGPIPPG--RQGCNEQQKKTKDGFRVPKR 514
P S G N +K +D + KR
Sbjct: 427 FPTSSSSTNGTLEPNANSPKKNEQDAWIAKKR 458
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 27.5 bits (58), Expect = 2.5
Identities = 16/59 (27%), Positives = 27/59 (45%)
Frame = +2
Query: 278 PPSLTHNVPAAMDSLPIPTPLCAISSTTASKVKPPRSSVRPVFISTSTPVPASGPIPPG 454
PP + P + +P+ A S ++S PP + P+ +++ST PA P G
Sbjct: 946 PPVQQPSHPNPYTPVAPQSPVAAASRISSSPNMPPSNPYTPIAVASSTVNPAHTYKPHG 1004
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 27.5 bits (58), Expect = 2.5
Identities = 18/67 (26%), Positives = 25/67 (37%)
Frame = +2
Query: 245 NVDSAIGLNSSPPSLTHNVPAAMDSLPIPTPLCAISSTTASKVKPPRSSVRPVFISTSTP 424
N D S P +TH P LP+ T L S + + +SV V + P
Sbjct: 888 NFDIPNDATSLPTIITHPTPPPPPPLPVKTSLNTFSHPDSVNIVANDTSVAGVMPAFPPP 947
Query: 425 VPASGPI 445
P P+
Sbjct: 948 PPPPPPL 954
>SPCPJ732.01 |vps5||retromer complex subunit
Vps5|Schizosaccharomyces pombe|chr 3|||Manual
Length = 576
Score = 27.1 bits (57), Expect = 3.3
Identities = 22/80 (27%), Positives = 32/80 (40%)
Frame = +2
Query: 185 PDGLVFDPTIRKINKCDQPFNVDSAIGLNSSPPSLTHNVPAAMDSLPIPTPLCAISSTTA 364
P G +PTI + VD+ +SS P+ TH V +A T L + A
Sbjct: 136 PIGATENPTIPNSEQ-----TVDTLDAASSSAPNFTHTVSSASSQKQGSTSLTDTENQKA 190
Query: 365 SKVKPPRSSVRPVFISTSTP 424
P+ S+ P +I P
Sbjct: 191 HPAAAPQ-SLTPFYIQVHDP 209
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 27.1 bits (57), Expect = 3.3
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +2
Query: 254 SAIGLNSSPPSLTHNVPAAM-DSLPIPTPLCAISSTTA-SKVKPPRSSVRPVFISTSTPV 427
+A +++ S +N + + S P TPL + +STTA S P +SV ++++
Sbjct: 263 AATSASATSSSAQYNTSSLLPSSTPSSTPLSSANSTTATSASSTPLTSVNSTTTTSASST 322
Query: 428 PAS 436
P S
Sbjct: 323 PLS 325
>SPBC18E5.11c |edc3|SPBC23G7.01c|enhancer of mRNA decapping Edc3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 454
Score = 27.1 bits (57), Expect = 3.3
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +2
Query: 599 VMP*NGVEPP*TSAAKVRE-KVYNEEEPRNCDCGLEKRFA 715
+MP NG + P T++ K++ + Y+ + + DC E FA
Sbjct: 63 IMPKNGTKSPSTNSTKLKSAETYSSKNKWSMDCDEEFDFA 102
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 27.1 bits (57), Expect = 3.3
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +2
Query: 269 NSSPPSLTHNVPAAMDSLPIPTPLCAISSTTASKVKPPRSSVRPVFISTSTPVPASG 439
NS+ P P + S P P + SST S P +S +TST +P +G
Sbjct: 296 NSTTPVTPTVPPTSTSSTSTPPPPASTSSTGTSSSPLPSTSTS---CTTSTSIPPTG 349
Score = 26.6 bits (56), Expect = 4.4
Identities = 16/60 (26%), Positives = 26/60 (43%)
Frame = +2
Query: 272 SSPPSLTHNVPAAMDSLPIPTPLCAISSTTASKVKPPRSSVRPVFISTSTPVPASGPIPP 451
S+PP S P+P+ + S TT++ + P +S PV + +S PP
Sbjct: 314 STPPPPASTSSTGTSSSPLPST--STSCTTSTSIPPTGNSTTPVTPTVPPTSTSSTSTPP 371
Score = 26.2 bits (55), Expect = 5.8
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +2
Query: 278 PPSLTHNVPAAMDSLPIPTPLCAISSTTASKVKPPRSSVRPVFISTSTPVPASGPIPP 451
PP+ T + +S P+PT + S TT++ + P +S PV + +S PP
Sbjct: 264 PPTSTSSTDT--NSSPLPTT--STSCTTSTSIPPTGNSTTPVTPTVPPTSTSSTSTPP 317
>SPBC1A4.03c |top2|ptr11|DNA topoisomerase II|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1485
Score = 26.6 bits (56), Expect = 4.4
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Frame = -3
Query: 658 LLPN--FGSRSSRGLDTVSRHYVETVASPL 575
L+PN FG+RS G + + Y+ T SPL
Sbjct: 814 LMPNGQFGTRSEGGKNASASRYLNTALSPL 843
>SPAC4D7.10c |||SAGA complex subunit Spt20 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 473
Score = 26.6 bits (56), Expect = 4.4
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = +2
Query: 248 VDSAIGLNSSPPSLTHNVPAAMDSLPIPTPLCAISSTTASKVKPPRSSVRPVFISTSTPV 427
V SA + P + P+++ +P P P+ + AS PP ++ F+ S PV
Sbjct: 332 VQSAPVQRKTTPKIQRLPPSSIQ-IPPPKPMQKFPANAASSESPPNATGN--FL-PSGPV 387
Query: 428 PASGPI 445
PA+ P+
Sbjct: 388 PANEPM 393
>SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1336
Score = 26.6 bits (56), Expect = 4.4
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +2
Query: 98 PAKDGQYEDDRQCDKFFECVDGVATTKLCPDGLVFDPTIRK 220
P Y DD ++ E V G T +C ++FD TIR+
Sbjct: 488 PTYGNIYLDDFPLEEIDEHVLGSTITLVCQQPVIFDMTIRE 528
>SPAC17G8.14c |pck1|SPAC22H10.01c|protein kinase C
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 988
Score = 26.6 bits (56), Expect = 4.4
Identities = 15/60 (25%), Positives = 26/60 (43%)
Frame = +2
Query: 335 PLCAISSTTASKVKPPRSSVRPVFISTSTPVPASGPIPPGRQGCNEQQKKTKDGFRVPKR 514
P+ ++ +T+ P + V S+STP PAS PP + + + P+R
Sbjct: 594 PVTSVLNTSPLPKTPEKDRSLNVTPSSSTPTPASVLAPPSSASLSSSKDANRSVPESPRR 653
>SPCC1281.06c |||acyl-coA desaturase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 479
Score = 26.2 bits (55), Expect = 5.8
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -1
Query: 834 IING*VIHLIPGFKKPPNLGLLGSGF 757
+ING V+H + GF+ P GLL S F
Sbjct: 377 LING-VVHDMTGFEHPGGQGLLRSAF 401
>SPAC8C9.04 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 647
Score = 26.2 bits (55), Expect = 5.8
Identities = 19/66 (28%), Positives = 29/66 (43%)
Frame = +2
Query: 224 NKCDQPFNVDSAIGLNSSPPSLTHNVPAAMDSLPIPTPLCAISSTTASKVKPPRSSVRPV 403
++ D+P ++ L + P T N P+A S +PT +S T P SS
Sbjct: 109 DQVDEPLEPIASSALGTVEPP-TDNKPSASTSTAVPTTEARNTSITEPANSPSSSSSSAS 167
Query: 404 FISTST 421
ST+T
Sbjct: 168 TKSTAT 173
>SPAC328.04 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 741
Score = 26.2 bits (55), Expect = 5.8
Identities = 22/85 (25%), Positives = 34/85 (40%), Gaps = 4/85 (4%)
Frame = +2
Query: 209 TIRKINKCDQPFNVDSAIGL---NSSPPSLTHNVPAAMDSLPIPTP-LCAISSTTASKVK 376
T I+ PF + L + PS++ + + S+ P L ++SS T S
Sbjct: 281 TYSSISSSSSPFKKKTQSHLPNRTTEVPSISKQLSKSSTSIATVAPSLASVSSVTKSPSP 340
Query: 377 PPRSSVRPVFISTSTPVPASGPIPP 451
P+S+ R ST T PP
Sbjct: 341 TPQSAPRAQSASTETAQDLDFLTPP 365
>SPCC1827.03c |||acetyl-CoA ligase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 512
Score = 26.2 bits (55), Expect = 5.8
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -3
Query: 823 VSNPLNTGL*KTPEFGVAWFRLSLQEILCNP 731
V +P+N + EF VA++ +S Q +C P
Sbjct: 51 VGDPVNIAIPNGLEFVVAFYAVSWQRAICGP 81
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 26.2 bits (55), Expect = 5.8
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +2
Query: 206 PTIRKINKCDQPFNVDSAIGLNS-SPPSLTHNVPAAMDSLPIPTPLCAISSTTASKVKPP 382
PT+ ++ + G+NS S SL +++ S T +++STTA + P
Sbjct: 819 PTVSSTTSSSSTTSLAANKGVNSNSITSLNLESTSSVTSTAYTTD--SVTSTTALTSQGP 876
Query: 383 RSSVRPVFISTSTPVPASGPI 445
SSV +S++T + S P+
Sbjct: 877 SSSVVSSSLSSTTSLSTSIPV 897
Score = 25.8 bits (54), Expect = 7.6
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +2
Query: 272 SSPPSLTHNVPAAMDSLPIPTPLCAISSTTASKVKPPRSSVRPVFISTSTPVPAS 436
SSP S++ ++ ++ L PTP + ++S + SS+ IST P+ +S
Sbjct: 609 SSPSSISSSISSSSTILSSPTPSTSSLMISSSSIISGSSSILSSSIST-IPISSS 662
>SPAC15E1.04 |||thymidylate synthase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 625
Score = 25.8 bits (54), Expect = 7.6
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -1
Query: 279 GLEFSPIAESTLKGWSHLLIFLIVGSNT 196
GLE PI L+ W+HLL+ + +NT
Sbjct: 97 GLE-CPITHIELRRWAHLLLIAPLSANT 123
>SPCC736.11 |ago1|csp9|argonaute|Schizosaccharomyces pombe|chr
3|||Manual
Length = 834
Score = 25.8 bits (54), Expect = 7.6
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 6/55 (10%)
Frame = -1
Query: 351 DIAHRGVGMGKESIAAGTL*VRLGGLEFSPIAES------TLKGWSHLLIFLIVG 205
D+ H GVG SIA+ V L G +++ ++ S ++G ++++L+ G
Sbjct: 580 DVYHPGVGATGVSIASIVASVDLNGCKYTAVSRSQPRHQEVIEGMKDIVVYLLQG 634
>SPAP27G11.15 |slx1||structure-specific endonuclease catalytic
subunit |Schizosaccharomyces pombe|chr 1|||Manual
Length = 271
Score = 25.8 bits (54), Expect = 7.6
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = +1
Query: 331 DPSVCNIFYNCIEGEATEVKC 393
+P CN+ Y CIE + C
Sbjct: 176 EPVKCNLCYECIESDELRANC 196
>SPBC21C3.01c |vps13a|vps1301, SPBC31F10.18c|chorein
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 3071
Score = 25.8 bits (54), Expect = 7.6
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -3
Query: 262 YRRVYVEGLVAFVDLPDSRVEH 197
Y RV +E L+AF P +++EH
Sbjct: 612 YNRVCIESLLAFFVPPRTKIEH 633
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,844,398
Number of Sequences: 5004
Number of extensions: 89501
Number of successful extensions: 331
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 288
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 327
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 414453330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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